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CSPI04G27190 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G27190
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA helicase
Genome locationChr4:23967078..23968731
RNA-Seq ExpressionCSPI04G27190
SyntenyCSPI04G27190
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4267529.1 unnamed protein product [Prunus armeniaca]8.4e-0972.92Show/hide
Query:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDK
        MALM+GEPL+ KLAV A Y+VLPGAM AALIYSPPDY  SK D K  K
Subjt:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDK

KAG2698054.1 hypothetical protein I3760_07G133200 [Carya illinoinensis]4.2e-0868.75Show/hide
Query:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDK
        MA M+GEPL+ KLAV A Y+VLPGAM AALIYSPPDY  S K +K  K
Subjt:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDK

KAG7037970.1 hypothetical protein SDJN02_01603, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-1181.82Show/hide
Query:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDE
        MALMKGEPL+RKLAVFA Y+VLPGAMAAAL+YSPPDY Y K D+
Subjt:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDE

KAG7971403.1 hypothetical protein I3843_07G132200 [Carya illinoinensis]7.1e-0868.75Show/hide
Query:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDK
        MA M+GEPL+ KLAV A Y+VLPGAM AALIYSPPDY  S K  K  K
Subjt:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDK

KGN55532.1 hypothetical protein Csa_011995 [Cucumis sativus]1.3e-1798.04Show/hide
Query:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDKSSK
        MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKK+EKDDKSSK
Subjt:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDKSSK

TrEMBL top hitse value%identityAlignment
A0A0A0L4N8 Uncharacterized protein6.3e-1898.04Show/hide
Query:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDKSSK
        MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKK+EKDDKSSK
Subjt:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDKSSK

A0A2R6PZ99 DNA helicase7.7e-0865.31Show/hide
Query:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDKS
        M  M+GEPL+ KLAV A Y VLPGAM AALIYSPPDY Y KK ++   S
Subjt:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDKS

A0A5N6RC88 Uncharacterized protein3.8e-0772.5Show/hide
Query:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYS
        MALM+GEPL++KLA+ A Y+VLPGAM AAL+YSPPDY  S
Subjt:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYS

A0A6A4L8H6 Uncharacterized protein (Fragment)2.2e-0767.35Show/hide
Query:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDKS
        MA M+GEPL+ KLAV A Y VLPGAM AALIYSPPDY+ SKK +    S
Subjt:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDKS

A0A6J5TUT5 Uncharacterized protein4.1e-0972.92Show/hide
Query:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDK
        MALM+GEPL+ KLAV A Y+VLPGAM AALIYSPPDY  SK D K  K
Subjt:  MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGATGAAAGGAGAACCCCTGTTGAGGAAGCTCGCCGTGTTCGCTGGGTACATCGTTCTTCCGGGAGCCATGGCCGCTGCTCTCATTTACTCTCCTCCCGATTA
CATCTACTCCAAGAAAGACGAGAAAGACGATAAGTCTTCCAAATAG
mRNA sequenceShow/hide mRNA sequence
GGACTTTTTACATCAATTCGTGTTGGAAGCAGAAGAGGAATAATGGCGCTGATGAAAGGAGAACCCCTGTTGAGGAAGCTCGCCGTGTTCGCTGGGTACATCGTTCTTCC
GGGAGCCATGGCCGCTGCTCTCATTTACTCTCCTCCCGATTACATCTACTCCAAGAAAGACGAGAAAGACGATAAGTCTTCCAAATAGGACTCTTTCCCCTTCTTTCACC
GAATGGATCGTCTGATCATGTAGGCTTGCATTTGCAGTGTTGTATTTCTCTTATGTTGATAATGGTGTGTACTGGACTTATTGTCATGTCTCAATAACTAGTCATTTGTC
TTACTTTTGAGGCTTCGCCTTTGGAGAAATAATAAACTTTTTCCCTCTTCTTTTTCTCTTTATGTTTTTTGAAGAAATTCTATGAGATAATACATATCATTTGAAGTAGA
GACTGAACCATGGAAGTGGGAACTTTATGGGATACATTACTCTAAATTTCATATGCTTATATGAAAATTTGAACAGTTATAAAATGCGGGAAATGAAGAATCCCCACGAC
CACACAAACCATACATATTTATTCACAGTTCACACAGTCCTAAAGTACTAACCCTTTGGTTCTGCCCACTGTCGAATTGAAATCAAAATTTCCACTTTTAGGTGACTTGG
AGTGTTGACAATGACAGAGGATAAAGATGCTTCATGGAGAGATTATCATAGCAAATAATTAAAAAGCCACTCCCAACTGGGTTGACTGTTGAGTGTGTTAATAACAGGGA
AAGAAGATACTTTGGAGCAGAC
Protein sequenceShow/hide protein sequence
MALMKGEPLLRKLAVFAGYIVLPGAMAAALIYSPPDYIYSKKDEKDDKSSK