; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G27350 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G27350
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationChr4:24035667..24039723
RNA-Seq ExpressionCSPI04G27350
SyntenyCSPI04G27350
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649970.1 hypothetical protein Csa_012955 [Cucumis sativus]4.8e-15697.79Show/hide
Query:  MKFLQLFGWEQAPNLDCRNGGCEGIVG---EHAVDEHFSDNTFSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHAR
        MKFLQLFGWEQAPNLDCRNGGCEGIVG      VDEHFSDNTFSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHAR
Subjt:  MKFLQLFGWEQAPNLDCRNGGCEGIVG---EHAVDEHFSDNTFSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHAR

Query:  WAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVL
        WAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVL
Subjt:  WAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVL

Query:  FDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSSFSR
        FDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSSFSR
Subjt:  FDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSSFSR

TYK19913.1 chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo var. makuwa]3.5e-14390.77Show/hide
Query:  MKFLQLFGWEQAPNLDCRNGGCEGIVGE------HAVDEHFSDNTFSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEIL
        MKFLQLFGW+QA N+DC NGGC+GIVG        ++  +F +N   SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQK+FNFEIL
Subjt:  MKFLQLFGWEQAPNLDCRNGGCEGIVGE------HAVDEHFSDNTFSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEIL

Query:  HARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPG
        HARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPG
Subjt:  HARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPG

Query:  GVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSS
        GVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHI+DPFHNNFLSLLNSS
Subjt:  GVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSS

XP_004145567.1 chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Cucumis sativus]1.6e-132100Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
        LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
Subjt:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK

Query:  GPVQNLLDHIADPFHNNFLSLLNSSFSR
        GPVQNLLDHIADPFHNNFLSLLNSSFSR
Subjt:  GPVQNLLDHIADPFHNNFLSLLNSSFSR

XP_008453032.2 PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo]4.5e-13099.11Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQK+FNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
        LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
Subjt:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK

Query:  GPVQNLLDHIADPFHNNFLSLLNSS
        GPVQNLLDHI+DPFHNNFLSLLNSS
Subjt:  GPVQNLLDHIADPFHNNFLSLLNSS

XP_038898449.1 chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Benincasa hispida]5.0e-12997.78Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQK+FNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
        LGIPGLHLAGSQGV+VIAICQAILMVGPEYARYCGIEALEPLGI+LPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
Subjt:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK

Query:  GPVQNLLDHIADPFHNNFLSLLNSS
        GPVQNLL+HI+DPFHNNFLSLLNSS
Subjt:  GPVQNLLDHIADPFHNNFLSLLNSS

TrEMBL top hitse value%identityAlignment
A0A0A0L0U5 Chlorophyll a-b binding protein, chloroplastic4.2e-15897.81Show/hide
Query:  MKFLQLFGWEQAPNLDCRNGGCEGIVG------EHAVDEHFSDNTFSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEIL
        MKFLQLFGWEQAPNLDCRNGGCEGIVG      EHAVDEHFSDNTFSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEIL
Subjt:  MKFLQLFGWEQAPNLDCRNGGCEGIVG------EHAVDEHFSDNTFSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEIL

Query:  HARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPG
        HARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPG
Subjt:  HARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPG

Query:  GVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSSFSR
        GVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSSFSR
Subjt:  GVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSSFSR

A0A1S3BWE1 Chlorophyll a-b binding protein, chloroplastic2.2e-13099.11Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQK+FNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
        LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
Subjt:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK

Query:  GPVQNLLDHIADPFHNNFLSLLNSS
        GPVQNLLDHI+DPFHNNFLSLLNSS
Subjt:  GPVQNLLDHIADPFHNNFLSLLNSS

A0A5A7VCG1 Chlorophyll a-b binding protein, chloroplastic2.7e-12898.22Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQK+FNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLK  TLDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
        LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
Subjt:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK

Query:  GPVQNLLDHIADPFHNNFLSLLNSS
        GPVQNLLDHI+DPFHNNFLSLLNSS
Subjt:  GPVQNLLDHIADPFHNNFLSLLNSS

A0A5D3D8P8 Chlorophyll a-b binding protein, chloroplastic1.7e-14390.77Show/hide
Query:  MKFLQLFGWEQAPNLDCRNGGCEGIVGE------HAVDEHFSDNTFSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEIL
        MKFLQLFGW+QA N+DC NGGC+GIVG        ++  +F +N   SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQK+FNFEIL
Subjt:  MKFLQLFGWEQAPNLDCRNGGCEGIVGE------HAVDEHFSDNTFSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEIL

Query:  HARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPG
        HARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPG
Subjt:  HARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPG

Query:  GVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSS
        GVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHI+DPFHNNFLSLLNSS
Subjt:  GVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSS

A0A6J1FCV0 Chlorophyll a-b binding protein, chloroplastic3.5e-12896.44Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        SSWYGE+RPRWLGPLPY+YPKYLTGELPGDYGFDIAGLSEDPVAF+K+FNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
        LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
Subjt:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK

Query:  GPVQNLLDHIADPFHNNFLSLLNSS
        GP+QNLL+H++DPFHNNFLSLLNSS
Subjt:  GPVQNLLDHIADPFHNNFLSLLNSS

SwissProt top hitse value%identityAlignment
P12470 Chlorophyll a-b binding protein E, chloroplastic4.6e-5350.69Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        S WYG +R ++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H RWAML +LG + PE+L   G   F E +W++ G        LDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
        LG P   L  +Q ++ I  CQ +LM   E  R  G    EPLG  +  D  YPGG  FDPL L++D  AF ELKVKEIKNGRLAM +  GF+ QA +TGK
Subjt:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK

Query:  GPVQNLLDHIADPFHNN
        GP++NL DH+ADP +NN
Subjt:  GPVQNLLDHIADPFHNN

P22686 Chlorophyll a-b binding protein of LHCII type I, chloroplastic6.0e-5348.84Show/hide
Query:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG
        WYG +R +WLGP   + P YLTGE PGDYG+D AGLS DP  F+K+   E++HARWA+L +LG L PE+L  +    F EP+W++ G        LDYLG
Subjt:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG

Query:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP
         P   L  +Q ++     Q +LM   E  R  G  A E L    PG+        FDPL L+ D   F ELKVKEIKNGRLAM +  GF+ QA +TGKGP
Subjt:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP

Query:  VQNLLDHIADPFHNN
        +QNL DH+ADP  NN
Subjt:  VQNLLDHIADPFHNN

P27518 Chlorophyll a-b binding protein 151, chloroplastic7.1e-5447.58Show/hide
Query:  EQAPNLDCRNGGCEGIVGEHAVDEHFSDNTFSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVP
        +Q+  L C+ G   G  G  ++         S WYG +RP++LGP     P YLTGE PGDYG+D AGLS DP  F K    E++H RWAML +LG + P
Subjt:  EQAPNLDCRNGGCEGIVGEHAVDEHFSDNTFSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVP

Query:  EILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA
        EIL   G   F E +W++ G        LDYLG P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPL L+ D  A
Subjt:  EILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA

Query:  FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNN
        F ELKVKEIKNGRLAM +  GF+ QA +TGKGP++NL DH+ADP  NN
Subjt:  FEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNN

Q9C9K1 Chlorophyll a-b binding protein 7, chloroplastic3.6e-11480.36Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        S WYG+ERPRW GP+PYDYP YLTGELPGDYGFDIAGL +D + F K+FNFEILHARWAMLA+LGAL+PE+ D+ G FHF EP+WWRVGYSKL+G+TL+Y
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
        LGIPGLH+AGSQGVIVIAICQ +LMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+D  AFE+LKVKEIKNGRLAMVAWLGFY+QAA TGK
Subjt:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK

Query:  GPVQNLLDHIADPFHNNFLSLLNS
        GPVQNL+DH++DP HNN +++L +
Subjt:  GPVQNLLDHIADPFHNNFLSLLNS

Q9XF87 Chlorophyll a-b binding protein 2.4, chloroplastic7.1e-5452.07Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        S WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
        LG P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TGK
Subjt:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK

Query:  GPVQNLLDHIADPFHNN
        GP++NL DHIADP  NN
Subjt:  GPVQNLLDHIADPFHNN

Arabidopsis top hitse value%identityAlignment
AT1G76570.1 Chlorophyll A-B binding family protein2.5e-11580.36Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        S WYG+ERPRW GP+PYDYP YLTGELPGDYGFDIAGL +D + F K+FNFEILHARWAMLA+LGAL+PE+ D+ G FHF EP+WWRVGYSKL+G+TL+Y
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
        LGIPGLH+AGSQGVIVIAICQ +LMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+D  AFE+LKVKEIKNGRLAMVAWLGFY+QAA TGK
Subjt:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK

Query:  GPVQNLLDHIADPFHNNFLSLLNS
        GPVQNL+DH++DP HNN +++L +
Subjt:  GPVQNLLDHIADPFHNNFLSLLNS

AT2G05070.1 photosystem II light harvesting complex gene 2.21.2e-5351.15Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        S WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
        LG P  +L  +Q ++ I   Q +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TGK
Subjt:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK

Query:  GPVQNLLDHIADPFHNN
        GP++NL DH+ADP  NN
Subjt:  GPVQNLLDHIADPFHNN

AT2G05100.1 photosystem II light harvesting complex gene 2.11.2e-5351.15Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        S WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
        LG P  +L  +Q ++ I   Q +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TGK
Subjt:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK

Query:  GPVQNLLDHIADPFHNN
        GP++NL DH+ADP  NN
Subjt:  GPVQNLLDHIADPFHNN

AT3G27690.1 photosystem II light harvesting complex gene 2.35.0e-5552.07Show/hide
Query:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        S WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LDY
Subjt:  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
        LG P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TGK
Subjt:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK

Query:  GPVQNLLDHIADPFHNN
        GP++NL DHIADP  NN
Subjt:  GPVQNLLDHIADPFHNN

AT5G54270.1 light-harvesting chlorophyll B-binding protein 38.1e-5347.44Show/hide
Query:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG
        WYG +R ++LGP     P YLTGE PGDYG+D AGLS DP AF K    E++H RWAML + G + PE+L  +    F EP+W++ G        LDYLG
Subjt:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG

Query:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP
         P  +L  +Q ++ +   Q ILM   E  R  G++ +        G+  YPGG  FDPL L+ D   F ELKVKEIKNGRLAM +  GF+ QA +TGKGP
Subjt:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP

Query:  VQNLLDHIADPFHNN
        ++NLLDH+ +P  NN
Subjt:  VQNLLDHIADPFHNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTCTCCAGTTATTTGGCTGGGAACAAGCACCAAACCTTGATTGTCGGAATGGCGGATGTGAAGGGATTGTTGGAGAACATGCAGTAGATGAGCACTTCTCTGA
CAACACATTCAGCTCGTGGTATGGAGAAGAGCGTCCTCGGTGGCTTGGTCCACTACCATATGATTATCCAAAATATCTGACAGGTGAACTGCCTGGTGATTATGGATTTG
ATATTGCAGGTTTGAGTGAGGATCCTGTGGCTTTCCAGAAATTCTTCAACTTTGAAATATTGCATGCTCGTTGGGCTATGTTAGCATCCCTAGGTGCTTTAGTTCCAGAG
ATCTTGGATATTTTTGGAGCTTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCA
CTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCCATTTTGATGGTTGGACCCGAATATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAA
TATATCTGCCGGGGGATATAAATTATCCAGGTGGTGTATTGTTTGATCCCTTGAATCTGTCCAAGGATGCTGCAGCCTTTGAGGAACTAAAAGTAAAAGAGATTAAAAAT
GGGCGTTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCTGCTTTGACGGGTAAGGGACCAGTCCAAAACCTTCTTGACCACATTGCAGATCCTTTCCACAATAA
CTTTCTTTCCCTGCTCAATTCTTCATTTAGTCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTTCTCCAGTTATTTGGCTGGGAACAAGCACCAAACCTTGATTGTCGGAATGGCGGATGTGAAGGGATTGTTGGAGAACATGCAGTAGATGAGCACTTCTCTGA
CAACACATTCAGCTCGTGGTATGGAGAAGAGCGTCCTCGGTGGCTTGGTCCACTACCATATGATTATCCAAAATATCTGACAGGTGAACTGCCTGGTGATTATGGATTTG
ATATTGCAGGTTTGAGTGAGGATCCTGTGGCTTTCCAGAAATTCTTCAACTTTGAAATATTGCATGCTCGTTGGGCTATGTTAGCATCCCTAGGTGCTTTAGTTCCAGAG
ATCTTGGATATTTTTGGAGCTTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCA
CTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCCATTTTGATGGTTGGACCCGAATATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAA
TATATCTGCCGGGGGATATAAATTATCCAGGTGGTGTATTGTTTGATCCCTTGAATCTGTCCAAGGATGCTGCAGCCTTTGAGGAACTAAAAGTAAAAGAGATTAAAAAT
GGGCGTTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCTGCTTTGACGGGTAAGGGACCAGTCCAAAACCTTCTTGACCACATTGCAGATCCTTTCCACAATAA
CTTTCTTTCCCTGCTCAATTCTTCATTTAGTCGCTAATAACTGGAACCTGGATAAAGTATAGTGTCGTCAAATCTGTATAGTGTTCATAAGGGATGGATAATCTGTCATA
GCTGTTTTAGACGTGAGCTAGTTGCTCAGTAAGTTAATACTTGTGACGTGGTATTATATCTTTCTATCTTATATCAAGTATCTTTGAGAACCTTATGCTTTGATAAAATT
TGATTCAAAAACTACAAGTTGAGTTCCTA
Protein sequenceShow/hide protein sequence
MKFLQLFGWEQAPNLDCRNGGCEGIVGEHAVDEHFSDNTFSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPE
ILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKN
GRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSSFSR