; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G27480 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G27480
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUPF0047 protein YjbQ
Genome locationChr4:24129863..24133130
RNA-Seq ExpressionCSPI04G27480
SyntenyCSPI04G27480
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001602 - Uncharacterised protein family UPF0047
IPR035917 - YjbQ-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591177.1 hypothetical protein SDJN03_13523, partial [Cucurbita argyrosperma subsp. sororia]7.8e-8190.74Show/hide
Query:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        MQGA++LAAQPLRVKLL  NNSSTGNPSATAG+ NPS MAAAGPKWAQKTVTL PHRRGCHLITPKIMKEIG+DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ
        DSDV++DTETFLN IVPEGTSAPWKHTLEGPDDMPAHIKSS+FGCALT+PITNGK NMGTWQ
Subjt:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ

XP_004145568.1 uncharacterized protein LOC101209705 [Cucumis sativus]1.1e-87100Show/hide
Query:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ
        DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ
Subjt:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ

XP_008453044.1 PREDICTED: UPF0047 protein YjbQ [Cucumis melo]6.1e-8698.15Show/hide
Query:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPS MAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ
        DSDVQ+DTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGK NMGTWQ
Subjt:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ

XP_022936473.1 uncharacterized protein LOC111443082 [Cucurbita moschata]2.0e-8191.36Show/hide
Query:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        MQGA++LAAQPLRVKLL SNNSSTGNPSATAG+ NPS MAAAGPKWAQKTVTL PHRRGCHLITPKIMKEIG+DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ
        DSDV++DTETFLN IVPEGTSAPWKHTLEGPDDMPAHIKSS+FGCALT+PITNGK NMGTWQ
Subjt:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ

XP_022976235.1 uncharacterized protein LOC111476694 [Cucurbita maxima]2.0e-8191.36Show/hide
Query:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        MQGA++LAAQPLRVKLL SNNSSTGNPSATAG+ NPS MAAAGPKWAQKTVTL PHRRGCHLITPKIMKEIG DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ
        DSDV++DTETFLN IVPEGTSAPWKHTLEGPDDMPAHIKSS+FGCALT+PITNGK NMGTWQ
Subjt:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ

TrEMBL top hitse value%identityAlignment
A0A0A0L4Q6 Uncharacterized protein4.2e-8899.39Show/hide
Query:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQFS
        DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ S
Subjt:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQFS

A0A1S3BUP9 UPF0047 protein YjbQ3.0e-8698.15Show/hide
Query:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPS MAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ
        DSDVQ+DTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGK NMGTWQ
Subjt:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ

A0A5D3D8K7 UPF0047 protein YjbQ2.4e-7596.58Show/hide
Query:  EDRHCTYKFTVVWPLGMQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAH
        +DRH TYKFTVVWP GMQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPS MAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAH
Subjt:  EDRHCTYKFTVVWPLGMQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAH

Query:  IFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTLEG
        IFLQHTSASLTINENYDSDVQ+DTETFLNKIVPEGTSAPWKHTLEG
Subjt:  IFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTLEG

A0A6J1FDC5 uncharacterized protein LOC1114430829.9e-8291.36Show/hide
Query:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        MQGA++LAAQPLRVKLL SNNSSTGNPSATAG+ NPS MAAAGPKWAQKTVTL PHRRGCHLITPKIMKEIG+DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ
        DSDV++DTETFLN IVPEGTSAPWKHTLEGPDDMPAHIKSS+FGCALT+PITNGK NMGTWQ
Subjt:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ

A0A6J1IIX0 uncharacterized protein LOC1114766949.9e-8291.36Show/hide
Query:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        MQGA++LAAQPLRVKLL SNNSSTGNPSATAG+ NPS MAAAGPKWAQKTVTL PHRRGCHLITPKIMKEIG DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ
        DSDV++DTETFLN IVPEGTSAPWKHTLEGPDDMPAHIKSS+FGCALT+PITNGK NMGTWQ
Subjt:  DSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ

SwissProt top hitse value%identityAlignment
O14155 UPF0047 protein C4A8.02c1.2e-2853.04Show/hide
Query:  QKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCAL
        Q+ +TL    +G ++IT  ++K++  +L  F  G  + F+QHTSA+LTINEN+D+D + D    L+KIVPE  SA ++HT EG DDMPAH+KSSL G +L
Subjt:  QKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCAL

Query:  TIPITNGKLNMGTWQ
        T+PITNGKL++GTWQ
Subjt:  TIPITNGKLNMGTWQ

P0A2L1 UPF0047 protein YjbQ1.8e-2448.72Show/hide
Query:  WAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGC
        W Q+T+TLS   RG HLIT +I  ++   L   + GL H+ L HTSASLT+NEN D  V+ D E    K VP+  +A ++H  EG DDMP+HIKSS+ G 
Subjt:  WAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGC

Query:  ALTIPITNGKLNMGTWQ
        +L +P+  G+L +GTWQ
Subjt:  ALTIPITNGKLNMGTWQ

P0A2L2 UPF0047 protein YjbQ1.8e-2448.72Show/hide
Query:  WAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGC
        W Q+T+TLS   RG HLIT +I  ++   L   + GL H+ L HTSASLT+NEN D  V+ D E    K VP+  +A ++H  EG DDMP+HIKSS+ G 
Subjt:  WAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGC

Query:  ALTIPITNGKLNMGTWQ
        +L +P+  G+L +GTWQ
Subjt:  ALTIPITNGKLNMGTWQ

P0AF48 UPF0047 protein YjbQ2.0e-2647.86Show/hide
Query:  WAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGC
        W QKT+TLS   RG HL+T +I+ ++  D+     GL H+ LQHTSASLT+NEN D  V++D E F  + VP+  +  ++H  EG DDMP+HIKSS+ G 
Subjt:  WAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGC

Query:  ALTIPITNGKLNMGTWQ
        +L +P+  G++  GTWQ
Subjt:  ALTIPITNGKLNMGTWQ

P0AF49 UPF0047 protein YjbQ2.0e-2647.86Show/hide
Query:  WAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGC
        W QKT+TLS   RG HL+T +I+ ++  D+     GL H+ LQHTSASLT+NEN D  V++D E F  + VP+  +  ++H  EG DDMP+HIKSS+ G 
Subjt:  WAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGC

Query:  ALTIPITNGKLNMGTWQ
        +L +P+  G++  GTWQ
Subjt:  ALTIPITNGKLNMGTWQ

Arabidopsis top hitse value%identityAlignment
AT1G21065.1 unknown protein6.8e-5976.12Show/hide
Query:  ATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTL
        A   +   S  +++G KWAQKT+TL P RRGCHLITPKI+KEI +DLS+F CGLAH+FLQHTSASLTINENYD DVQ DTETFLN+IVPEG SAPW+HT+
Subjt:  ATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTL

Query:  EGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ
        EGPDDMPAHIKSS+FGC LTIPIT GKL+MGTWQ
Subjt:  EGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTATAGTTGCATGTTTAGATATTTGTTTGATATTACTAATTTTCTCATTTATTATATATATTATACATTAATTATTTATTCTTATTATTATTGTTCTTTTTTTCT
TTTTGAAGATAGGCACTGCACTTACAAGTTTACGGTTGTGTGGCCTTTGGGTATGCAAGGCGCTATTATCTTGGCTGCACAACCGCTCCGCGTAAAGTTGTTGCGGAGCA
ACAATTCCAGTACTGGCAATCCGTCCGCTACAGCAGGCTCTAGCAACCCAAGCTTTATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGTCTCCTCAT
AGGCGTGGCTGTCATCTCATCACCCCGAAGATAATGAAGGAAATTGGACAAGACTTGTCAGAATTCAAATGCGGCCTTGCTCATATCTTCTTGCAGCATACGAGTGCCTC
TCTTACCATCAATGAAAACTATGATTCGGATGTTCAGAACGATACTGAAACCTTCCTCAACAAGATAGTACCTGAAGGTACATCTGCTCCTTGGAAGCATACACTTGAAG
GCCCGGATGACATGCCAGCTCACATTAAATCATCGTTGTTTGGCTGTGCACTGACGATTCCCATAACAAATGGAAAGCTTAATATGGGTACATGGCAGTTCTCAGTTCAT
AAAGAAGTTTACTCGGCTTACTTCGGCTTCCTTTTCAATGTTGACTCCCTCTTATCAATGGCCGGAAAAATATCCTCCTTCACATTTGACCAAAAATCTTCTCCGTTTGC
CCCTAAAGAAGCTGTCGAATCACAGATACACTATTCAAAGATTGCAAAATTGGATAATAATGGGGTTTGTTACAATTTGATTGTTCCGACCTGGGGTAATAGAGAAGAGT
GGTCTAAGGCAGCCCCACATCTCCATTCACACAATTTTCCCGATTGGGGGAATCGAAGAGGCTGCATCTACTTATAG
mRNA sequenceShow/hide mRNA sequence
TCCCGAATGATTTATAGTTGCATGTTTAGATATTTGTTTGATATTACTAATTTTCTCATTTATTATATATATTATACATTAATTATTTATTCTTATTATTATTGTTCTTT
TTTTCTTTTTGAAGATAGGCACTGCACTTACAAGTTTACGGTTGTGTGGCCTTTGGGTATGCAAGGCGCTATTATCTTGGCTGCACAACCGCTCCGCGTAAAGTTGTTGC
GGAGCAACAATTCCAGTACTGGCAATCCGTCCGCTACAGCAGGCTCTAGCAACCCAAGCTTTATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGTCT
CCTCATAGGCGTGGCTGTCATCTCATCACCCCGAAGATAATGAAGGAAATTGGACAAGACTTGTCAGAATTCAAATGCGGCCTTGCTCATATCTTCTTGCAGCATACGAG
TGCCTCTCTTACCATCAATGAAAACTATGATTCGGATGTTCAGAACGATACTGAAACCTTCCTCAACAAGATAGTACCTGAAGGTACATCTGCTCCTTGGAAGCATACAC
TTGAAGGCCCGGATGACATGCCAGCTCACATTAAATCATCGTTGTTTGGCTGTGCACTGACGATTCCCATAACAAATGGAAAGCTTAATATGGGTACATGGCAGTTCTCA
GTTCATAAAGAAGTTTACTCGGCTTACTTCGGCTTCCTTTTCAATGTTGACTCCCTCTTATCAATGGCCGGAAAAATATCCTCCTTCACATTTGACCAAAAATCTTCTCC
GTTTGCCCCTAAAGAAGCTGTCGAATCACAGATACACTATTCAAAGATTGCAAAATTGGATAATAATGGGGTTTGTTACAATTTGATTGTTCCGACCTGGGGTAATAGAG
AAGAGTGGTCTAAGGCAGCCCCACATCTCCATTCACACAATTTTCCCGATTGGGGGAATCGAAGAGGCTGCATCTACTTATAG
Protein sequenceShow/hide protein sequence
MIYSCMFRYLFDITNFLIYYIYYTLIIYSYYYCSFFLFEDRHCTYKFTVVWPLGMQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPH
RRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQFSVH
KEVYSAYFGFLFNVDSLLSMAGKISSFTFDQKSSPFAPKEAVESQIHYSKIAKLDNNGVCYNLIVPTWGNREEWSKAAPHLHSHNFPDWGNRRGCIYL