; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G27540 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G27540
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationChr4:24155717..24158806
RNA-Seq ExpressionCSPI04G27540
SyntenyCSPI04G27540
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR000953 - Chromo/chromo shadow domain
IPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR023780 - Chromo domain
IPR036397 - Ribonuclease H superfamily
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062868.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]0.0e+0069.09Show/hide
Query:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL
        V LKN++K+W + D G+LIECR+M      P     EE   ++E +  +L +F+D+F WPE LPPRRSIEH I+LK+GT+PVNVRPYRY Y QK EMERL
Subjt:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL

Query:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF
        V EML+SG+IRPS SPYSSPVLLV+KKDGSWRFCVDYR LN+VT+PDKFPIPV+EELFDEL GA  F+KIDLKAGYHQIRM  GDIEKTAFRTHEGHYEF
Subjt:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF

Query:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK
        LVMPFGLTNAP+TFQSLMN++F+PYLR+F+LVFFDDILIYS+NLE HL H+     +LR++EL+ANRKKCSF   +V+YLGH+IS +GVEVDPEKI+AI 
Subjt:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK

Query:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY
        +WP PT++RE RGFLGLTGYYRKFV HYG++AAPLTQL+KKGGFNW   +E+AF++L++AM+ LPVLALP F   FE+ETDASGYG+GAVL+Q K+PIA+
Subjt:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY

Query:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL
        +SHTLA+RDR +PVYERELMAVV+AVQRWRPYLLG  FIVRTDQKSLKFLLEQRV+QPQYQ+W+AKLLGY+F+V+YKPG+ENKAADALSR+   VQ  ++
Subjt:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL

Query:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK
        T P  +DL ++K+EVE+DT+L K+  E+       + KF I +GML+YKDRLV+SQ+S LIP IL++YHDS +GGHSGFLRTYKRI+GELYW GMK  +K
Subjt:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK

Query:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR
        +YC ECLICQ+NK+L L+PAGLLLPL +PT IW+DISMDF+EGLPK+ GFE IFVVVDR SKYGHF+ LKHP++AKTVAE+FVKE+VRLHGFP SIVSDR
Subjt:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR

Query:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS
        D+VF+S+FWK MF+LAGTKLNRS+AYHPQ+DGQTEVVNR VE YLRCFC++KPKEW KW+ WAEYWYNTTF ++LG+TPFQ VYGR PPPLL YG Q T 
Subjt:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS

Query:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV
        N  LDEQLK RDE++  L+E+LR+AQ++MKK AD +RRD+EYKVGD+VFLKIRPYRQ SLR+K+NEKLS K+FGP+++ ERIG VAYKL+LPKS+ IHPV
Subjt:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV

Query:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS
        FHVSQL+K+VG HT ++P  +  L+EN+ W   P E   Y +NK G WEV+++W GL   + +WE Y +   K+P+FHLEDKV LE   N RPPI+ QYS
Subjt:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS

Query:  RRKKKQ
        R+ K++
Subjt:  RRKKKQ

KAA0068193.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]0.0e+0069.18Show/hide
Query:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL
        V LKN++K+W + D G+LIECR+M      P     EE   ++E +  +L +F+D+F WPE LPPRRSIEH I+LK+GT+PVNVRPYRY Y QK EMERL
Subjt:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL

Query:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF
        V EML+SG+IRPS SPYSSPVLLV+KKDGSWRFCVDYR LN+VT+PDKFPIPV+EELFDEL GA  F+KIDLKAGYHQIRM  GDIEKTAFRTHEGHYEF
Subjt:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF

Query:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK
        LVMPFGLTNAP+TFQSLMN++F+PYLR+F+LVFFDDILIYS+NLE HL H+     +LR++EL+ANRKKCSF   +V+YLGH+IS +GVEVDPEKI+AI 
Subjt:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK

Query:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY
        +WP PT++RE RGFLGLTGYYRKFV HYG++AAPLTQL+KKGGFNW   +E+AF++L++AM+ LPVLALP F   FE+ETDASGYG+GAVL+Q K+PIA+
Subjt:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY

Query:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL
        +SHTLA+RDR +PVYERELMAVV+AVQRWRPYLLG  FIVRTDQKSLKFLLEQRV+QPQYQ+W+AKLLGY+F+V+YKPG+ENKAADALSR+   VQ  ++
Subjt:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL

Query:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK
        T P  +DL ++K+EVE+DT+L K+  E+       + KF I +GML+YKDRLV+SQ+S LIP IL++YHDS +GGHSGFLRTYKRI+GELYW GMK  +K
Subjt:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK

Query:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR
        +YC ECLICQ+NK+L L+PAGLLLPL +PT IW+DISMDF+EGLPK+ GFE IFVVVDR SKYGHF+ LKHP++AKTVAE+FVKE+VRLHGFP SIVSDR
Subjt:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR

Query:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS
        D+VF+S+FWK MF+LAGTKLNRS+AYHPQ+DGQTEVVNR VE YLRCFC++KPKEW KW+ WAEYWYNTTF ++LG+TPFQ VYGR PPPLL YG Q T 
Subjt:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS

Query:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV
        N  LDEQLK RDE++  L+E+LR+AQ++MKK AD +RRD+EYKVGD+VFLKIRPYRQ SLR+K+NEKLS K+FGP+++ ERIG VAYKL+LPKS+ IHPV
Subjt:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV

Query:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS
        FHVSQL+K+VG HT ++P  +  L+EN+ W   P E   Y +NK G WEV+I+W GL   + +WE Y +   K+P+FHLEDKV LE   N RPPI+ QYS
Subjt:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS

Query:  RRKKKQ
        R+ K++
Subjt:  RRKKKQ

TYJ95763.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]0.0e+0069.28Show/hide
Query:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL
        V LKN++K+W + D G+LIECR++E      + +  EE     + +  +L +F DVF WPE LPPRRSIEH I+LK+GT+PVNVRPYRY Y QK EME+L
Subjt:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL

Query:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF
        V EML SG+IRPS SPYSSPVLLV+KKDGSWRFCVDYR LN+VT+PDKFPIPV+EELFDEL GA  F+KIDLKAGYHQIRM  GDIEKTAFRTHEGHYEF
Subjt:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF

Query:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK
        LVMPFGLTNAP+TFQSLMN++F+PYLRKF+LVFFDDILIYS+N E HL H+ +   +LR++EL+ANRKKCSF   +V+YLGH+IS +GVEVDPEKI+AI 
Subjt:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK

Query:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY
         WP PTN+RE RGFLGLTGYYRKFV HYG++AAPLTQL+KKGGF W   +E+AF++L++AM+ LP+LALP F   FE+ETDASGYGIGAVL+Q K+PIA+
Subjt:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY

Query:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL
        +SHTLA RDR +PVYERELMAVV+AVQRWRPYLLG  F+VRTDQKSLKFLLEQRV+QPQYQ+W+AKLLGY+F+V+YKPG+ENKAADALSRV   +Q  ++
Subjt:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL

Query:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK
        T P  +DL V+K+EVE+DTRL K+   L S ++  + KF+I +GML+YKDRLV+SQSS LIP +L++YHDS +GGHSGFLRTYKRI GELYW GMKT IK
Subjt:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK

Query:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR
        +YC ECLICQ+NK+L L+PAGLLLPL +PT IW+DISMDF+EGLPK+ GFE IFVVVDR SKY HFL LKHP++AKTVA++FVKE+VRLHGFP SIVSDR
Subjt:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR

Query:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS
        D+VF+S+FWK MF+LAGTKLNRS+AYHPQ+DGQTEVVNR VE YLRC C++KPKEW KW+ WAEYWYNTTF R+LG+TPFQ VYGR PPPLL YG Q TS
Subjt:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS

Query:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV
        N  LDEQL+ RD+++  L+EHLR+AQD+MKK AD KRRDVEY+VGD VFLKIRPYRQ SLR+K+NEKLS K+FGP+++ ERIG VAYKL+LP+ + IHPV
Subjt:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV

Query:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS
        FHVSQL+K+VG H  ++P  +  L+EN+ W   P E   Y +NK   WEV+I+W+GL   +A+WE+Y++   K+PNFHLEDKV LE   N RPPI+ QYS
Subjt:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS

Query:  RRKKKQ
        R+ K++
Subjt:  RRKKKQ

TYJ96875.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]0.0e+0069.18Show/hide
Query:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL
        V LKN++K+W + D G+LIECR+M      P     EE   ++E +  +L +F+D+F WPE LPPRRSIEH I+LK+GT+PVNVRPYRY Y QK EMERL
Subjt:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL

Query:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF
        V EML+SG+IRPS SPYSSPVLLV+KKDGSWRFCVDYR LN+VT+PDKFPIPV+EELFDEL GA  F+KIDLKAGYHQIRM  GDIEKTAFRTHEGHYEF
Subjt:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF

Query:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK
        LVMPFGLTNAP+TFQSLMN++F+PYLR+F+LVFFDDILIYS+NLE HL H+     +LR++EL+ANRKKCSF   +V+YLGH+IS +GVEVDPEKI+AI 
Subjt:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK

Query:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY
        +WP PT++RE RGFLGLTGYYRKFV HYG++AAPLTQL+KKGGFNW   +E+AF++L++AM+ LPVLALP F   FE+ETDASGYG+GAVL+Q K+PIA+
Subjt:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY

Query:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL
        +SHTLA+RDR +PVYERELMAVV+AVQRWRPYLLG  FIVRTDQKSLKFLLEQRV+QPQYQ+W+AKLLGY+F+V+YKPG+ENKAADALSR+   VQ  ++
Subjt:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL

Query:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK
        T P  +DL ++K+EVE+DT+L K+  E+       + KF I +GML+YKDRLV+SQ+S LIP IL++YHDS +GGHSGFLRTYKRI+GELYW GMK  +K
Subjt:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK

Query:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR
        +YC ECLICQ+NK+L L+PAGLLLPL +PT IW+DISMDF+EGLPK+ GFE IFVVVDR SKYGHF+ LKHP++AKTVAE+FVKE+VRLHGFP SIVSDR
Subjt:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR

Query:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS
        D+VF+S+FWK MF+LAGTKLNRS+AYHPQ+DGQTEVVNR VE YLRCFC++KPKEW KW+ WAEYWYNTTF ++LG+TPFQ VYGR PPPLL YG Q T 
Subjt:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS

Query:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV
        N  LDEQLK RDE++  L+E+LR+AQ++MKK AD +RRD+EYKVGD+VFLKIRPYRQ SLR+K+NEKLS K+FGP+++ ERIG VAYKL+LPKS+ IHPV
Subjt:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV

Query:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS
        FHVSQL+K+VG HT ++P  +  L+EN+ W   P E   Y +NK G WEV+I+W GL   + +WE Y +   K+P+FHLEDKV LE   N RPPI+ QYS
Subjt:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS

Query:  RRKKKQ
        R+ K++
Subjt:  RRKKKQ

TYK22240.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]0.0e+0069.28Show/hide
Query:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL
        V LKN++K+W + D G+LIECR++E      + +  EE     + +  +L +F DVF WPE LPPRRSIEH I+LK+GT+PVNVRPYRY Y QK EME+L
Subjt:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL

Query:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF
        V EML SG+IRPS SPYSSPVLLV+KKDGSWRFCVDYR LN+VT+PDKFPIPV+EELFDEL GA  F+KIDLKAGYHQIRM  GDIEKTAFRTHEGHYEF
Subjt:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF

Query:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK
        LVMPFGLTNAP+TFQSLMN++F+PYLRKF+LVFFDDILIYS+N E HL H+ +   +LR++EL+ANRKKCSF   +V+YLGH+IS +GVEVDPEKI+AI 
Subjt:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK

Query:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY
         WP PTN+RE RGFLGLTGYYRKFV HYG++AAPLTQL+KKGGF W   +E+AF++L++AM+ LP+LALP F   FE+ETDASGYGIGAVL+Q K+PIA+
Subjt:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY

Query:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL
        +SHTLA RDR +PVYERELMAVV+AVQRWRPYLLG  F+VRTDQKSLKFLLEQRV+QPQYQ+W+AKLLGY+F+V+YKPG+ENKAADALSRV   +Q  ++
Subjt:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL

Query:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK
        T P  +DL V+K+EVE+DTRL K+   L S ++  + KF+I +GML+YKDRLV+SQSS LIP +L++YHDS +GGHSGFLRTYKRI GELYW GMKT IK
Subjt:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK

Query:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR
        +YC ECLICQ+NK+L L+PAGLLLPL +PT IW+DISMDF+EGLPK+ GFE IFVVVDR SKY HFL LKHP++AKTVA++FVKE+VRLHGFP SIVSDR
Subjt:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR

Query:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS
        D+VF+S+FWK MF+LAGTKLNRS+AYHPQ+DGQTEVVNR VE YLRC C++KPKEW KW+ WAEYWYNTTF R+LG+TPFQ VYGR PPPLL YG Q TS
Subjt:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS

Query:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV
        N  LDEQL+ RD+++  L+EHLR+AQD+MKK AD KRRDVEY+VGD VFLKIRPYRQ SLR+K+NEKLS K+FGP+++ ERIG VAYKL+LP+ + IHPV
Subjt:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV

Query:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS
        FHVSQL+K+VG H  ++P  +  L+EN+ W   P E   Y +NK   WEV+I+W+GL   +A+WE+Y++   K+PNFHLEDKV LE   N RPPI+ QYS
Subjt:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS

Query:  RRKKKQ
        R+ K++
Subjt:  RRKKKQ

TrEMBL top hitse value%identityAlignment
A0A5A7V5H5 Ty3/gypsy retrotransposon protein0.0e+0069.09Show/hide
Query:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL
        V LKN++K+W + D G+LIECR+M      P     EE   ++E +  +L +F+D+F WPE LPPRRSIEH I+LK+GT+PVNVRPYRY Y QK EMERL
Subjt:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL

Query:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF
        V EML+SG+IRPS SPYSSPVLLV+KKDGSWRFCVDYR LN+VT+PDKFPIPV+EELFDEL GA  F+KIDLKAGYHQIRM  GDIEKTAFRTHEGHYEF
Subjt:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF

Query:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK
        LVMPFGLTNAP+TFQSLMN++F+PYLR+F+LVFFDDILIYS+NLE HL H+     +LR++EL+ANRKKCSF   +V+YLGH+IS +GVEVDPEKI+AI 
Subjt:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK

Query:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY
        +WP PT++RE RGFLGLTGYYRKFV HYG++AAPLTQL+KKGGFNW   +E+AF++L++AM+ LPVLALP F   FE+ETDASGYG+GAVL+Q K+PIA+
Subjt:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY

Query:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL
        +SHTLA+RDR +PVYERELMAVV+AVQRWRPYLLG  FIVRTDQKSLKFLLEQRV+QPQYQ+W+AKLLGY+F+V+YKPG+ENKAADALSR+   VQ  ++
Subjt:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL

Query:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK
        T P  +DL ++K+EVE+DT+L K+  E+       + KF I +GML+YKDRLV+SQ+S LIP IL++YHDS +GGHSGFLRTYKRI+GELYW GMK  +K
Subjt:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK

Query:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR
        +YC ECLICQ+NK+L L+PAGLLLPL +PT IW+DISMDF+EGLPK+ GFE IFVVVDR SKYGHF+ LKHP++AKTVAE+FVKE+VRLHGFP SIVSDR
Subjt:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR

Query:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS
        D+VF+S+FWK MF+LAGTKLNRS+AYHPQ+DGQTEVVNR VE YLRCFC++KPKEW KW+ WAEYWYNTTF ++LG+TPFQ VYGR PPPLL YG Q T 
Subjt:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS

Query:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV
        N  LDEQLK RDE++  L+E+LR+AQ++MKK AD +RRD+EYKVGD+VFLKIRPYRQ SLR+K+NEKLS K+FGP+++ ERIG VAYKL+LPKS+ IHPV
Subjt:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV

Query:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS
        FHVSQL+K+VG HT ++P  +  L+EN+ W   P E   Y +NK G WEV+++W GL   + +WE Y +   K+P+FHLEDKV LE   N RPPI+ QYS
Subjt:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS

Query:  RRKKKQ
        R+ K++
Subjt:  RRKKKQ

A0A5A7VJA0 Ty3/gypsy retrotransposon protein0.0e+0069.18Show/hide
Query:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL
        V LKN++K+W + D G+LIECR+M      P     EE   ++E +  +L +F+D+F WPE LPPRRSIEH I+LK+GT+PVNVRPYRY Y QK EMERL
Subjt:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL

Query:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF
        V EML+SG+IRPS SPYSSPVLLV+KKDGSWRFCVDYR LN+VT+PDKFPIPV+EELFDEL GA  F+KIDLKAGYHQIRM  GDIEKTAFRTHEGHYEF
Subjt:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF

Query:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK
        LVMPFGLTNAP+TFQSLMN++F+PYLR+F+LVFFDDILIYS+NLE HL H+     +LR++EL+ANRKKCSF   +V+YLGH+IS +GVEVDPEKI+AI 
Subjt:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK

Query:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY
        +WP PT++RE RGFLGLTGYYRKFV HYG++AAPLTQL+KKGGFNW   +E+AF++L++AM+ LPVLALP F   FE+ETDASGYG+GAVL+Q K+PIA+
Subjt:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY

Query:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL
        +SHTLA+RDR +PVYERELMAVV+AVQRWRPYLLG  FIVRTDQKSLKFLLEQRV+QPQYQ+W+AKLLGY+F+V+YKPG+ENKAADALSR+   VQ  ++
Subjt:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL

Query:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK
        T P  +DL ++K+EVE+DT+L K+  E+       + KF I +GML+YKDRLV+SQ+S LIP IL++YHDS +GGHSGFLRTYKRI+GELYW GMK  +K
Subjt:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK

Query:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR
        +YC ECLICQ+NK+L L+PAGLLLPL +PT IW+DISMDF+EGLPK+ GFE IFVVVDR SKYGHF+ LKHP++AKTVAE+FVKE+VRLHGFP SIVSDR
Subjt:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR

Query:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS
        D+VF+S+FWK MF+LAGTKLNRS+AYHPQ+DGQTEVVNR VE YLRCFC++KPKEW KW+ WAEYWYNTTF ++LG+TPFQ VYGR PPPLL YG Q T 
Subjt:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS

Query:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV
        N  LDEQLK RDE++  L+E+LR+AQ++MKK AD +RRD+EYKVGD+VFLKIRPYRQ SLR+K+NEKLS K+FGP+++ ERIG VAYKL+LPKS+ IHPV
Subjt:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV

Query:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS
        FHVSQL+K+VG HT ++P  +  L+EN+ W   P E   Y +NK G WEV+I+W GL   + +WE Y +   K+P+FHLEDKV LE   N RPPI+ QYS
Subjt:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS

Query:  RRKKKQ
        R+ K++
Subjt:  RRKKKQ

A0A5D3B8Y6 Ty3/gypsy retrotransposon protein0.0e+0069.28Show/hide
Query:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL
        V LKN++K+W + D G+LIECR++E      + +  EE     + +  +L +F DVF WPE LPPRRSIEH I+LK+GT+PVNVRPYRY Y QK EME+L
Subjt:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL

Query:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF
        V EML SG+IRPS SPYSSPVLLV+KKDGSWRFCVDYR LN+VT+PDKFPIPV+EELFDEL GA  F+KIDLKAGYHQIRM  GDIEKTAFRTHEGHYEF
Subjt:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF

Query:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK
        LVMPFGLTNAP+TFQSLMN++F+PYLRKF+LVFFDDILIYS+N E HL H+ +   +LR++EL+ANRKKCSF   +V+YLGH+IS +GVEVDPEKI+AI 
Subjt:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK

Query:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY
         WP PTN+RE RGFLGLTGYYRKFV HYG++AAPLTQL+KKGGF W   +E+AF++L++AM+ LP+LALP F   FE+ETDASGYGIGAVL+Q K+PIA+
Subjt:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY

Query:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL
        +SHTLA RDR +PVYERELMAVV+AVQRWRPYLLG  F+VRTDQKSLKFLLEQRV+QPQYQ+W+AKLLGY+F+V+YKPG+ENKAADALSRV   +Q  ++
Subjt:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL

Query:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK
        T P  +DL V+K+EVE+DTRL K+   L S ++  + KF+I +GML+YKDRLV+SQSS LIP +L++YHDS +GGHSGFLRTYKRI GELYW GMKT IK
Subjt:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK

Query:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR
        +YC ECLICQ+NK+L L+PAGLLLPL +PT IW+DISMDF+EGLPK+ GFE IFVVVDR SKY HFL LKHP++AKTVA++FVKE+VRLHGFP SIVSDR
Subjt:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR

Query:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS
        D+VF+S+FWK MF+LAGTKLNRS+AYHPQ+DGQTEVVNR VE YLRC C++KPKEW KW+ WAEYWYNTTF R+LG+TPFQ VYGR PPPLL YG Q TS
Subjt:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS

Query:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV
        N  LDEQL+ RD+++  L+EHLR+AQD+MKK AD KRRDVEY+VGD VFLKIRPYRQ SLR+K+NEKLS K+FGP+++ ERIG VAYKL+LP+ + IHPV
Subjt:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV

Query:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS
        FHVSQL+K+VG H  ++P  +  L+EN+ W   P E   Y +NK   WEV+I+W+GL   +A+WE+Y++   K+PNFHLEDKV LE   N RPPI+ QYS
Subjt:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS

Query:  RRKKKQ
        R+ K++
Subjt:  RRKKKQ

A0A5D3BEL2 Ty3/gypsy retrotransposon protein0.0e+0069.18Show/hide
Query:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL
        V LKN++K+W + D G+LIECR+M      P     EE   ++E +  +L +F+D+F WPE LPPRRSIEH I+LK+GT+PVNVRPYRY Y QK EMERL
Subjt:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL

Query:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF
        V EML+SG+IRPS SPYSSPVLLV+KKDGSWRFCVDYR LN+VT+PDKFPIPV+EELFDEL GA  F+KIDLKAGYHQIRM  GDIEKTAFRTHEGHYEF
Subjt:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF

Query:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK
        LVMPFGLTNAP+TFQSLMN++F+PYLR+F+LVFFDDILIYS+NLE HL H+     +LR++EL+ANRKKCSF   +V+YLGH+IS +GVEVDPEKI+AI 
Subjt:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK

Query:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY
        +WP PT++RE RGFLGLTGYYRKFV HYG++AAPLTQL+KKGGFNW   +E+AF++L++AM+ LPVLALP F   FE+ETDASGYG+GAVL+Q K+PIA+
Subjt:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY

Query:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL
        +SHTLA+RDR +PVYERELMAVV+AVQRWRPYLLG  FIVRTDQKSLKFLLEQRV+QPQYQ+W+AKLLGY+F+V+YKPG+ENKAADALSR+   VQ  ++
Subjt:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL

Query:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK
        T P  +DL ++K+EVE+DT+L K+  E+       + KF I +GML+YKDRLV+SQ+S LIP IL++YHDS +GGHSGFLRTYKRI+GELYW GMK  +K
Subjt:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK

Query:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR
        +YC ECLICQ+NK+L L+PAGLLLPL +PT IW+DISMDF+EGLPK+ GFE IFVVVDR SKYGHF+ LKHP++AKTVAE+FVKE+VRLHGFP SIVSDR
Subjt:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR

Query:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS
        D+VF+S+FWK MF+LAGTKLNRS+AYHPQ+DGQTEVVNR VE YLRCFC++KPKEW KW+ WAEYWYNTTF ++LG+TPFQ VYGR PPPLL YG Q T 
Subjt:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS

Query:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV
        N  LDEQLK RDE++  L+E+LR+AQ++MKK AD +RRD+EYKVGD+VFLKIRPYRQ SLR+K+NEKLS K+FGP+++ ERIG VAYKL+LPKS+ IHPV
Subjt:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV

Query:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS
        FHVSQL+K+VG HT ++P  +  L+EN+ W   P E   Y +NK G WEV+I+W GL   + +WE Y +   K+P+FHLEDKV LE   N RPPI+ QYS
Subjt:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS

Query:  RRKKKQ
        R+ K++
Subjt:  RRKKKQ

A0A5D3DFT1 Ty3/gypsy retrotransposon protein0.0e+0069.28Show/hide
Query:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL
        V LKN++K+W + D G+LIECR++E      + +  EE     + +  +L +F DVF WPE LPPRRSIEH I+LK+GT+PVNVRPYRY Y QK EME+L
Subjt:  VGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERL

Query:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF
        V EML SG+IRPS SPYSSPVLLV+KKDGSWRFCVDYR LN+VT+PDKFPIPV+EELFDEL GA  F+KIDLKAGYHQIRM  GDIEKTAFRTHEGHYEF
Subjt:  VEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEF

Query:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK
        LVMPFGLTNAP+TFQSLMN++F+PYLRKF+LVFFDDILIYS+N E HL H+ +   +LR++EL+ANRKKCSF   +V+YLGH+IS +GVEVDPEKI+AI 
Subjt:  LVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIK

Query:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY
         WP PTN+RE RGFLGLTGYYRKFV HYG++AAPLTQL+KKGGF W   +E+AF++L++AM+ LP+LALP F   FE+ETDASGYGIGAVL+Q K+PIA+
Subjt:  EWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAY

Query:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL
        +SHTLA RDR +PVYERELMAVV+AVQRWRPYLLG  F+VRTDQKSLKFLLEQRV+QPQYQ+W+AKLLGY+F+V+YKPG+ENKAADALSRV   +Q  ++
Subjt:  FSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSL

Query:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK
        T P  +DL V+K+EVE+DTRL K+   L S ++  + KF+I +GML+YKDRLV+SQSS LIP +L++YHDS +GGHSGFLRTYKRI GELYW GMKT IK
Subjt:  TAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIK

Query:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR
        +YC ECLICQ+NK+L L+PAGLLLPL +PT IW+DISMDF+EGLPK+ GFE IFVVVDR SKY HFL LKHP++AKTVA++FVKE+VRLHGFP SIVSDR
Subjt:  RYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDR

Query:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS
        D+VF+S+FWK MF+LAGTKLNRS+AYHPQ+DGQTEVVNR VE YLRC C++KPKEW KW+ WAEYWYNTTF R+LG+TPFQ VYGR PPPLL YG Q TS
Subjt:  DKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTS

Query:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV
        N  LDEQL+ RD+++  L+EHLR+AQD+MKK AD KRRDVEY+VGD VFLKIRPYRQ SLR+K+NEKLS K+FGP+++ ERIG VAYKL+LP+ + IHPV
Subjt:  NFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPV

Query:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS
        FHVSQL+K+VG H  ++P  +  L+EN+ W   P E   Y +NK   WEV+I+W+GL   +A+WE+Y++   K+PNFHLEDKV LE   N RPPI+ QYS
Subjt:  FHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLERECNDRPPIIHQYS

Query:  RRKKKQ
        R+ K++
Subjt:  RRKKKQ

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.9e-13633.37Show/hide
Query:  VLKKFEDVF--TWPETLP-PRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTI
        + K+F+D+   T  E LP P + +E  + L Q    + +R Y     +   M   + + L SG+IR S +  + PV+ V KK+G+ R  VDY+ LN    
Subjt:  VLKKFEDVF--TWPETLP-PRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTI

Query:  PDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLE
        P+ +P+P+IE+L  ++ G+  F+K+DLK+ YH IR+  GD  K AFR   G +E+LVMP+G++ AP+ FQ  +NT+        ++ + DDILI+SK+  
Subjt:  PDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLE

Query:  VHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIKEWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKG-GF
         H+ H+   L+ L+   L  N+ KC F Q +V ++G+ IS +G     E I  + +W  P N +E+R FLG   Y RKF+     +  PL  L+KK   +
Subjt:  VHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIKEWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKG-GF

Query:  NWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKK-----PIAYFSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLG--KP
         WT    +A + ++Q +++ PVL   DFS    LETDAS   +GAVL Q        P+ Y+S  ++       V ++E++A++ +++ WR YL    +P
Subjt:  NWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKK-----PIAYFSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLG--KP

Query:  FIVRTDQKSL--KFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSR-------VPSAVQFSSLTAPALIDLL--VVKKEVEEDTRLRKVWD
        F + TD ++L  +   E      +  +W   L  ++FE+ Y+PG  N  ADALSR       +P   + +S+     I +      + V E T   K+ +
Subjt:  FIVRTDQKSL--KFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSR-------VPSAVQFSSLTAPALIDLL--VVKKEVEEDTRLRKVWD

Query:  ELQSGEENTERKFSIRHGML-RYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIKRYCDECLICQKNKSLALTPAGLLLP
         L + ++  E    ++ G+L   KD+++L   + L   I+  YH+     H G       I     W G++  I+ Y   C  CQ NKS    P G L P
Subjt:  ELQSGEENTERKFSIRHGML-RYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIKRYCDECLICQKNKSLALTPAGLLLP

Query:  LEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTA
        +      W  +SMDFI  LP+S G+  +FVVVDRFSK    +      TA+  A +F + ++   G PK I++D D +F S  WK         +  S  
Subjt:  LEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTA

Query:  YHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVY----GRTPPPLLYYGDQSTSNFLLDEQLKARDEVLEVLKEH
        Y PQTDGQTE  N++VE  LRC CS  P  W   +   +  YN   H +  +TPF+ V+      +P  L  + D++      DE  +   +V + +KEH
Subjt:  YHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVY----GRTPPPLLYYGDQSTSNFLLDEQLKARDEVLEVLKEH

Query:  LRVAQDKMKKTADLKRRDV-EYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKS--SCIHPVFHVSQLRK
        L     KMKK  D+K +++ E++ GD+V +K    R  +    K+ KL+P F GPF V ++ G   Y+L LP S        FHVS L K
Subjt:  LRVAQDKMKKTADLKRRDV-EYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKS--SCIHPVFHVSQLRK

P0CT35 Transposon Tf2-2 polyprotein1.9e-13633.37Show/hide
Query:  VLKKFEDVF--TWPETLP-PRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTI
        + K+F+D+   T  E LP P + +E  + L Q    + +R Y     +   M   + + L SG+IR S +  + PV+ V KK+G+ R  VDY+ LN    
Subjt:  VLKKFEDVF--TWPETLP-PRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTI

Query:  PDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLE
        P+ +P+P+IE+L  ++ G+  F+K+DLK+ YH IR+  GD  K AFR   G +E+LVMP+G++ AP+ FQ  +NT+        ++ + DDILI+SK+  
Subjt:  PDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLE

Query:  VHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIKEWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKG-GF
         H+ H+   L+ L+   L  N+ KC F Q +V ++G+ IS +G     E I  + +W  P N +E+R FLG   Y RKF+     +  PL  L+KK   +
Subjt:  VHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIKEWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKG-GF

Query:  NWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKK-----PIAYFSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLG--KP
         WT    +A + ++Q +++ PVL   DFS    LETDAS   +GAVL Q        P+ Y+S  ++       V ++E++A++ +++ WR YL    +P
Subjt:  NWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKK-----PIAYFSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLG--KP

Query:  FIVRTDQKSL--KFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSR-------VPSAVQFSSLTAPALIDLL--VVKKEVEEDTRLRKVWD
        F + TD ++L  +   E      +  +W   L  ++FE+ Y+PG  N  ADALSR       +P   + +S+     I +      + V E T   K+ +
Subjt:  FIVRTDQKSL--KFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSR-------VPSAVQFSSLTAPALIDLL--VVKKEVEEDTRLRKVWD

Query:  ELQSGEENTERKFSIRHGML-RYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIKRYCDECLICQKNKSLALTPAGLLLP
         L + ++  E    ++ G+L   KD+++L   + L   I+  YH+     H G       I     W G++  I+ Y   C  CQ NKS    P G L P
Subjt:  ELQSGEENTERKFSIRHGML-RYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIKRYCDECLICQKNKSLALTPAGLLLP

Query:  LEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTA
        +      W  +SMDFI  LP+S G+  +FVVVDRFSK    +      TA+  A +F + ++   G PK I++D D +F S  WK         +  S  
Subjt:  LEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTA

Query:  YHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVY----GRTPPPLLYYGDQSTSNFLLDEQLKARDEVLEVLKEH
        Y PQTDGQTE  N++VE  LRC CS  P  W   +   +  YN   H +  +TPF+ V+      +P  L  + D++      DE  +   +V + +KEH
Subjt:  YHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVY----GRTPPPLLYYGDQSTSNFLLDEQLKARDEVLEVLKEH

Query:  LRVAQDKMKKTADLKRRDV-EYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKS--SCIHPVFHVSQLRK
        L     KMKK  D+K +++ E++ GD+V +K    R  +    K+ KL+P F GPF V ++ G   Y+L LP S        FHVS L K
Subjt:  LRVAQDKMKKTADLKRRDV-EYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKS--SCIHPVFHVSQLRK

P0CT36 Transposon Tf2-3 polyprotein1.9e-13633.37Show/hide
Query:  VLKKFEDVF--TWPETLP-PRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTI
        + K+F+D+   T  E LP P + +E  + L Q    + +R Y     +   M   + + L SG+IR S +  + PV+ V KK+G+ R  VDY+ LN    
Subjt:  VLKKFEDVF--TWPETLP-PRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTI

Query:  PDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLE
        P+ +P+P+IE+L  ++ G+  F+K+DLK+ YH IR+  GD  K AFR   G +E+LVMP+G++ AP+ FQ  +NT+        ++ + DDILI+SK+  
Subjt:  PDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLE

Query:  VHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIKEWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKG-GF
         H+ H+   L+ L+   L  N+ KC F Q +V ++G+ IS +G     E I  + +W  P N +E+R FLG   Y RKF+     +  PL  L+KK   +
Subjt:  VHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIKEWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKG-GF

Query:  NWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKK-----PIAYFSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLG--KP
         WT    +A + ++Q +++ PVL   DFS    LETDAS   +GAVL Q        P+ Y+S  ++       V ++E++A++ +++ WR YL    +P
Subjt:  NWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKK-----PIAYFSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLG--KP

Query:  FIVRTDQKSL--KFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSR-------VPSAVQFSSLTAPALIDLL--VVKKEVEEDTRLRKVWD
        F + TD ++L  +   E      +  +W   L  ++FE+ Y+PG  N  ADALSR       +P   + +S+     I +      + V E T   K+ +
Subjt:  FIVRTDQKSL--KFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSR-------VPSAVQFSSLTAPALIDLL--VVKKEVEEDTRLRKVWD

Query:  ELQSGEENTERKFSIRHGML-RYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIKRYCDECLICQKNKSLALTPAGLLLP
         L + ++  E    ++ G+L   KD+++L   + L   I+  YH+     H G       I     W G++  I+ Y   C  CQ NKS    P G L P
Subjt:  ELQSGEENTERKFSIRHGML-RYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIKRYCDECLICQKNKSLALTPAGLLLP

Query:  LEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTA
        +      W  +SMDFI  LP+S G+  +FVVVDRFSK    +      TA+  A +F + ++   G PK I++D D +F S  WK         +  S  
Subjt:  LEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTA

Query:  YHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVY----GRTPPPLLYYGDQSTSNFLLDEQLKARDEVLEVLKEH
        Y PQTDGQTE  N++VE  LRC CS  P  W   +   +  YN   H +  +TPF+ V+      +P  L  + D++      DE  +   +V + +KEH
Subjt:  YHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVY----GRTPPPLLYYGDQSTSNFLLDEQLKARDEVLEVLKEH

Query:  LRVAQDKMKKTADLKRRDV-EYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKS--SCIHPVFHVSQLRK
        L     KMKK  D+K +++ E++ GD+V +K    R  +    K+ KL+P F GPF V ++ G   Y+L LP S        FHVS L K
Subjt:  LRVAQDKMKKTADLKRRDV-EYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKS--SCIHPVFHVSQLRK

P0CT41 Transposon Tf2-12 polyprotein1.9e-13633.37Show/hide
Query:  VLKKFEDVF--TWPETLP-PRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTI
        + K+F+D+   T  E LP P + +E  + L Q    + +R Y     +   M   + + L SG+IR S +  + PV+ V KK+G+ R  VDY+ LN    
Subjt:  VLKKFEDVF--TWPETLP-PRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTI

Query:  PDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLE
        P+ +P+P+IE+L  ++ G+  F+K+DLK+ YH IR+  GD  K AFR   G +E+LVMP+G++ AP+ FQ  +NT+        ++ + DDILI+SK+  
Subjt:  PDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLE

Query:  VHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIKEWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKG-GF
         H+ H+   L+ L+   L  N+ KC F Q +V ++G+ IS +G     E I  + +W  P N +E+R FLG   Y RKF+     +  PL  L+KK   +
Subjt:  VHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIKEWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKG-GF

Query:  NWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKK-----PIAYFSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLG--KP
         WT    +A + ++Q +++ PVL   DFS    LETDAS   +GAVL Q        P+ Y+S  ++       V ++E++A++ +++ WR YL    +P
Subjt:  NWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKK-----PIAYFSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLG--KP

Query:  FIVRTDQKSL--KFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSR-------VPSAVQFSSLTAPALIDLL--VVKKEVEEDTRLRKVWD
        F + TD ++L  +   E      +  +W   L  ++FE+ Y+PG  N  ADALSR       +P   + +S+     I +      + V E T   K+ +
Subjt:  FIVRTDQKSL--KFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSR-------VPSAVQFSSLTAPALIDLL--VVKKEVEEDTRLRKVWD

Query:  ELQSGEENTERKFSIRHGML-RYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIKRYCDECLICQKNKSLALTPAGLLLP
         L + ++  E    ++ G+L   KD+++L   + L   I+  YH+     H G       I     W G++  I+ Y   C  CQ NKS    P G L P
Subjt:  ELQSGEENTERKFSIRHGML-RYKDRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIKRYCDECLICQKNKSLALTPAGLLLP

Query:  LEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTA
        +      W  +SMDFI  LP+S G+  +FVVVDRFSK    +      TA+  A +F + ++   G PK I++D D +F S  WK         +  S  
Subjt:  LEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTA

Query:  YHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVY----GRTPPPLLYYGDQSTSNFLLDEQLKARDEVLEVLKEH
        Y PQTDGQTE  N++VE  LRC CS  P  W   +   +  YN   H +  +TPF+ V+      +P  L  + D++      DE  +   +V + +KEH
Subjt:  YHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVY----GRTPPPLLYYGDQSTSNFLLDEQLKARDEVLEVLKEH

Query:  LRVAQDKMKKTADLKRRDV-EYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKS--SCIHPVFHVSQLRK
        L     KMKK  D+K +++ E++ GD+V +K    R  +    K+ KL+P F GPF V ++ G   Y+L LP S        FHVS L K
Subjt:  LRVAQDKMKKTADLKRRDV-EYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKS--SCIHPVFHVSQLRK

Q99315 Transposon Ty3-G Gag-Pol polyprotein3.9e-13734.65Show/hide
Query:  LPPRRS------IEHHIYLKQGTDPVNVRPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEE
        LPPR +      ++H I +K G     ++PY    + + E+ ++V+++L +  I PS SP SSPV+LV KKDG++R CVDYR LN  TI D FP+P I+ 
Subjt:  LPPRRS------IEHHIYLKQGTDPVNVRPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEE

Query:  LFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALE
        L   +  A+ F+ +DL +GYHQI M   D  KTAF T  G YE+ VMPFGL NAPSTF   M   F+    +F+ V+ DDILI+S++ E H  HL   LE
Subjt:  LFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALE

Query:  ILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIKEWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQR
         L+   L   +KKC FA E  ++LG+ I  Q +     K  AI+++PTP  +++ + FLG+  YYR+F+ +   +A P+ QL       WT+  ++A  +
Subjt:  ILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIKEWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDNSEEAFQR

Query:  LQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKP------IAYFSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFL
        L+ A+   PVL   +  + + L TDAS  GIGAVL +          + YFS +L    +  P  E EL+ ++ A+  +R  L GK F +RTD  SL  L
Subjt:  LQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKP------IAYFSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFL

Query:  LEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRV-----------------PSAVQFSSLTAPALIDL--LVVKKEVEEDTRLRKVWDELQSG
          +     + Q+W+  L  Y F ++Y  G +N  ADA+SR                   S  +   L +  LI +  L       ED    + + +    
Subjt:  LEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRV-----------------PSAVQFSSLTAPALIDL--LVVKKEVEEDTRLRKVWDELQSG

Query:  EENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHD-SVIGGHSGFLRTYKRITGELYWAGMKTDIKRYCDECLICQKNKSLALTPAGLLLPLEVPT
         E   + +S+   M+ Y+DRLV+        A++  YHD ++ GGH G   T  +I+   YW  ++  I +Y   C+ CQ  KS      GLL PL +  
Subjt:  EENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYHD-SVIGGHSGFLRTYKRITGELYWAGMKTDIKRYCDECLICQKNKSLALTPAGLLLPLEVPT

Query:  NIWSDISMDFIEGL-PKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTAYHPQ
          W DISMDF+ GL P S     I VVVDRFSK  HF+A +    A  + ++  + I   HGFP++I SDRD    +  ++ + K  G K   S+A HPQ
Subjt:  NIWSDISMDFIEGL-PKSCGFETIFVVVDRFSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTAYHPQ

Query:  TDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTP--PPLLYYGDQSTSNFLLDEQLKARDEVLEVLKEHLRVAQD
        TDGQ+E   +++   LR + S   + W  +L   E+ YN+T  R+LG +PF+   G  P  P +    + +  +F   E  K    +    KE L  AQ 
Subjt:  TDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTP--PPLLYYGDQSTSNFLLDEQLKARDEVLEVLKEHLRVAQD

Query:  KMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPVFHVSQLRKMV
        +M+   + +R+ +   +GD V +    +R +  +K    K+   + GPF V ++I   AY+L L      H V +V  L+K V
Subjt:  KMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPKSSCIHPVFHVSQLRKMV

Arabidopsis top hitse value%identityAlignment
ATMG00850.1 DNA/RNA polymerases superfamily protein1.2e-0553.85Show/hide
Query:  QKAEMERLVEEMLSSGVIRPSNSPYSSPVLLVRKKDGSW
        ++  ++  + EML + +I+PS SPYSSPVLLV+KKDG W
Subjt:  QKAEMERLVEEMLSSGVIRPSNSPYSSPVLLVRKKDGSW

ATMG00860.1 DNA/RNA polymerases superfamily protein1.4e-3652.67Show/hide
Query:  LTHLGLALEILRRNELYANRKKCSFAQERVDYLG--HIISAQGVEVDPEKIRAIKEWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFN
        + HLG+ L+I  +++ YANRKKC+F Q ++ YLG  HIIS +GV  DP K+ A+  WP P N  E+RGFLGLTGYYR+FV++YG +  PLT+L+KK    
Subjt:  LTHLGLALEILRRNELYANRKKCSFAQERVDYLG--HIISAQGVEVDPEKIRAIKEWPTPTNIREVRGFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFN

Query:  WTDNSEEAFQRLQQAMMTLPVLALPDFSSTF
        WT+ +  AF+ L+ A+ TLPVLALPD    F
Subjt:  WTDNSEEAFQRLQQAMMTLPVLALPDFSSTF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGCCTCAAGAATATGATTAAGTCATGGAGGGATTCTGACCAAGGATTCTTAATTGAGTGCCGAGCAATGGAGACAATGTATGAGCCCCCAGAAGATAATGGAAT
TGAGGAAGTACTAGCGGTGGACGAGGCAGTTTCAGTTGTCCTGAAGAAATTCGAAGATGTTTTTACATGGCCGGAGACTCTACCTCCACGAAGAAGTATTGAGCATCATA
TCTATTTGAAACAAGGAACTGACCCGGTAAATGTGAGGCCGTATCGCTATGGATACCAACAAAAGGCAGAGATGGAGAGATTGGTGGAAGAGATGCTGAGTTCAGGGGTT
ATTCGCCCAAGTAATAGCCCATATTCCAGCCCGGTTCTGTTAGTACGGAAGAAGGATGGAAGCTGGAGATTCTGCGTAGATTATAGAGTCTTAAACAGCGTGACTATACC
CGATAAGTTTCCCATTCCAGTTATTGAGGAGTTATTCGACGAGTTGAATGGAGCTAGATGGTTTTCAAAGATTGACTTGAAAGCTGGGTACCATCAAATTAGGATGGCAA
GTGGAGATATCGAAAAGACAGCATTCCGTACACACGAAGGACATTATGAGTTCTTAGTCATGCCCTTCGGATTAACTAATGCCCCCTCAACTTTCCAATCTTTGATGAAC
ACGGTATTTAAGCCATATCTAAGGAAGTTCATATTGGTGTTCTTCGATGATATTTTGATCTATAGCAAAAACTTAGAGGTACATCTCACGCATCTTGGACTAGCACTGGA
AATCCTAAGAAGAAACGAACTCTATGCTAATCGAAAGAAGTGTAGCTTTGCACAAGAACGCGTGGATTACCTAGGCCACATCATATCAGCTCAAGGAGTTGAGGTCGATC
CGGAAAAGATAAGAGCAATTAAAGAATGGCCTACACCTACAAATATAAGAGAAGTTCGCGGGTTCCTGGGCTTGACAGGATATTACCGAAAGTTCGTCCAACATTATGGA
TCAATGGCAGCTCCTTTAACTCAGTTAGTGAAGAAAGGAGGGTTCAATTGGACTGACAATTCAGAAGAAGCTTTTCAAAGGCTGCAACAAGCTATGATGACTCTACCGGT
CTTAGCATTGCCAGATTTCAGTAGCACCTTTGAATTGGAAACGGATGCATCGGGGTATGGCATAGGAGCTGTGTTAATGCAAGCCAAGAAACCGATTGCCTACTTCAGCC
ACACCTTGGCAGTAAGGGACAGAGTAAAGCCAGTCTATGAAAGAGAATTAATGGCCGTAGTCATGGCTGTACAGAGATGGAGACCGTATTTACTCGGAAAACCATTCATA
GTAAGGACTGACCAGAAATCATTGAAGTTTTTACTAGAGCAGAGAGTAATTCAACCACAGTACCAAAAGTGGGTAGCCAAGCTATTGGGATACTCTTTTGAAGTACAATA
CAAACCAGGACTAGAGAATAAAGCCGCTGACGCCCTATCCCGTGTACCTTCAGCGGTTCAATTCAGTAGCTTGACGGCACCAGCATTAATAGACTTATTAGTAGTCAAGA
AGGAAGTGGAAGAAGATACCAGACTTCGCAAAGTATGGGATGAACTACAATCAGGGGAGGAGAATACTGAAAGAAAATTTTCTATCAGACACGGAATGCTAAGGTACAAG
GACAGGTTGGTGTTATCTCAGTCATCAGCTTTGATTCCAGCCATACTGTATACTTATCATGATTCTGTGATAGGTGGACATTCTGGGTTTCTAAGAACTTATAAGAGAAT
TACTGGAGAGTTATATTGGGCCGGAATGAAAACTGACATCAAAAGGTACTGTGATGAATGTCTTATTTGTCAGAAGAATAAATCCTTGGCTTTAACCCCGGCTGGGCTAT
TACTGCCATTGGAAGTTCCCACCAACATTTGGAGTGATATCTCAATGGACTTCATTGAGGGGTTGCCGAAATCATGTGGCTTTGAAACTATATTTGTAGTGGTCGATAGG
TTCAGCAAATATGGTCATTTCCTTGCCCTCAAACATCCCTTCACAGCAAAAACTGTAGCAGAAGTATTTGTTAAAGAAATTGTGCGTCTACACGGATTTCCTAAATCCAT
CGTATCGGATAGAGATAAGGTATTTGTGAGCAGTTTTTGGAAAGGAATGTTCAAATTGGCTGGCACTAAATTAAATAGAAGCACGGCATATCACCCACAAACAGATGGTC
AGACAGAAGTGGTCAACAGGAGCGTGGAAACATATTTAAGATGTTTCTGTAGTGAGAAACCGAAGGAATGGGCAAAATGGCTACACTGGGCGGAGTATTGGTACAATACC
ACCTTCCACCGGTCATTGGGAATCACTCCTTTTCAGGCTGTATACGGTCGCACACCCCCTCCGTTATTATACTATGGGGATCAAAGCACATCTAACTTCCTGTTAGATGA
ACAACTCAAGGCAAGGGATGAAGTCTTGGAAGTATTGAAGGAACACCTTCGAGTGGCTCAAGATAAAATGAAAAAGACTGCAGATTTGAAGAGAAGAGATGTGGAATACA
AGGTTGGTGACATGGTGTTTTTAAAAATTAGGCCATACAGGCAATCTTCCTTGCGTAAGAAAAAGAATGAGAAACTGTCCCCAAAGTTTTTTGGGCCATTTGAAGTTACA
GAACGAATAGGACTGGTAGCATACAAGCTCCAACTACCGAAATCGTCATGTATTCACCCAGTCTTTCATGTCTCGCAACTTAGAAAGATGGTGGGAAATCACACCATGTT
GAAACCAGAAGAAATGGCCTGTTTAAATGAAAACTATGAGTGGTTGGCTATTCCGGAGGAGATATATGGGTATTCAAAGAACAAGGAAGGAATGTGGGAGGTGCTGATTA
AATGGCAAGGGCTACCACCTCAGGATGCATCTTGGGAGGAGTATGAAGAATTTCAGAAGAAATTTCCGAATTTTCACCTTGAGGACAAGGTGCATTTGGAAAGGGAATGT
AATGATAGACCCCCAATTATACACCAGTACAGTAGAAGGAAGAAGAAGCAAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGCCTCAAGAATATGATTAAGTCATGGAGGGATTCTGACCAAGGATTCTTAATTGAGTGCCGAGCAATGGAGACAATGTATGAGCCCCCAGAAGATAATGGAAT
TGAGGAAGTACTAGCGGTGGACGAGGCAGTTTCAGTTGTCCTGAAGAAATTCGAAGATGTTTTTACATGGCCGGAGACTCTACCTCCACGAAGAAGTATTGAGCATCATA
TCTATTTGAAACAAGGAACTGACCCGGTAAATGTGAGGCCGTATCGCTATGGATACCAACAAAAGGCAGAGATGGAGAGATTGGTGGAAGAGATGCTGAGTTCAGGGGTT
ATTCGCCCAAGTAATAGCCCATATTCCAGCCCGGTTCTGTTAGTACGGAAGAAGGATGGAAGCTGGAGATTCTGCGTAGATTATAGAGTCTTAAACAGCGTGACTATACC
CGATAAGTTTCCCATTCCAGTTATTGAGGAGTTATTCGACGAGTTGAATGGAGCTAGATGGTTTTCAAAGATTGACTTGAAAGCTGGGTACCATCAAATTAGGATGGCAA
GTGGAGATATCGAAAAGACAGCATTCCGTACACACGAAGGACATTATGAGTTCTTAGTCATGCCCTTCGGATTAACTAATGCCCCCTCAACTTTCCAATCTTTGATGAAC
ACGGTATTTAAGCCATATCTAAGGAAGTTCATATTGGTGTTCTTCGATGATATTTTGATCTATAGCAAAAACTTAGAGGTACATCTCACGCATCTTGGACTAGCACTGGA
AATCCTAAGAAGAAACGAACTCTATGCTAATCGAAAGAAGTGTAGCTTTGCACAAGAACGCGTGGATTACCTAGGCCACATCATATCAGCTCAAGGAGTTGAGGTCGATC
CGGAAAAGATAAGAGCAATTAAAGAATGGCCTACACCTACAAATATAAGAGAAGTTCGCGGGTTCCTGGGCTTGACAGGATATTACCGAAAGTTCGTCCAACATTATGGA
TCAATGGCAGCTCCTTTAACTCAGTTAGTGAAGAAAGGAGGGTTCAATTGGACTGACAATTCAGAAGAAGCTTTTCAAAGGCTGCAACAAGCTATGATGACTCTACCGGT
CTTAGCATTGCCAGATTTCAGTAGCACCTTTGAATTGGAAACGGATGCATCGGGGTATGGCATAGGAGCTGTGTTAATGCAAGCCAAGAAACCGATTGCCTACTTCAGCC
ACACCTTGGCAGTAAGGGACAGAGTAAAGCCAGTCTATGAAAGAGAATTAATGGCCGTAGTCATGGCTGTACAGAGATGGAGACCGTATTTACTCGGAAAACCATTCATA
GTAAGGACTGACCAGAAATCATTGAAGTTTTTACTAGAGCAGAGAGTAATTCAACCACAGTACCAAAAGTGGGTAGCCAAGCTATTGGGATACTCTTTTGAAGTACAATA
CAAACCAGGACTAGAGAATAAAGCCGCTGACGCCCTATCCCGTGTACCTTCAGCGGTTCAATTCAGTAGCTTGACGGCACCAGCATTAATAGACTTATTAGTAGTCAAGA
AGGAAGTGGAAGAAGATACCAGACTTCGCAAAGTATGGGATGAACTACAATCAGGGGAGGAGAATACTGAAAGAAAATTTTCTATCAGACACGGAATGCTAAGGTACAAG
GACAGGTTGGTGTTATCTCAGTCATCAGCTTTGATTCCAGCCATACTGTATACTTATCATGATTCTGTGATAGGTGGACATTCTGGGTTTCTAAGAACTTATAAGAGAAT
TACTGGAGAGTTATATTGGGCCGGAATGAAAACTGACATCAAAAGGTACTGTGATGAATGTCTTATTTGTCAGAAGAATAAATCCTTGGCTTTAACCCCGGCTGGGCTAT
TACTGCCATTGGAAGTTCCCACCAACATTTGGAGTGATATCTCAATGGACTTCATTGAGGGGTTGCCGAAATCATGTGGCTTTGAAACTATATTTGTAGTGGTCGATAGG
TTCAGCAAATATGGTCATTTCCTTGCCCTCAAACATCCCTTCACAGCAAAAACTGTAGCAGAAGTATTTGTTAAAGAAATTGTGCGTCTACACGGATTTCCTAAATCCAT
CGTATCGGATAGAGATAAGGTATTTGTGAGCAGTTTTTGGAAAGGAATGTTCAAATTGGCTGGCACTAAATTAAATAGAAGCACGGCATATCACCCACAAACAGATGGTC
AGACAGAAGTGGTCAACAGGAGCGTGGAAACATATTTAAGATGTTTCTGTAGTGAGAAACCGAAGGAATGGGCAAAATGGCTACACTGGGCGGAGTATTGGTACAATACC
ACCTTCCACCGGTCATTGGGAATCACTCCTTTTCAGGCTGTATACGGTCGCACACCCCCTCCGTTATTATACTATGGGGATCAAAGCACATCTAACTTCCTGTTAGATGA
ACAACTCAAGGCAAGGGATGAAGTCTTGGAAGTATTGAAGGAACACCTTCGAGTGGCTCAAGATAAAATGAAAAAGACTGCAGATTTGAAGAGAAGAGATGTGGAATACA
AGGTTGGTGACATGGTGTTTTTAAAAATTAGGCCATACAGGCAATCTTCCTTGCGTAAGAAAAAGAATGAGAAACTGTCCCCAAAGTTTTTTGGGCCATTTGAAGTTACA
GAACGAATAGGACTGGTAGCATACAAGCTCCAACTACCGAAATCGTCATGTATTCACCCAGTCTTTCATGTCTCGCAACTTAGAAAGATGGTGGGAAATCACACCATGTT
GAAACCAGAAGAAATGGCCTGTTTAAATGAAAACTATGAGTGGTTGGCTATTCCGGAGGAGATATATGGGTATTCAAAGAACAAGGAAGGAATGTGGGAGGTGCTGATTA
AATGGCAAGGGCTACCACCTCAGGATGCATCTTGGGAGGAGTATGAAGAATTTCAGAAGAAATTTCCGAATTTTCACCTTGAGGACAAGGTGCATTTGGAAAGGGAATGT
AATGATAGACCCCCAATTATACACCAGTACAGTAGAAGGAAGAAGAAGCAAGGTTAATCGCACGTGCTAGGGAGAATAGCCTTAGTTTTAATATTGTTAGTAGATGCTCC
ATAATAAAAT
Protein sequenceShow/hide protein sequence
MVGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSVVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERLVEEMLSSGV
IRPSNSPYSSPVLLVRKKDGSWRFCVDYRVLNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQSLMN
TVFKPYLRKFILVFFDDILIYSKNLEVHLTHLGLALEILRRNELYANRKKCSFAQERVDYLGHIISAQGVEVDPEKIRAIKEWPTPTNIREVRGFLGLTGYYRKFVQHYG
SMAAPLTQLVKKGGFNWTDNSEEAFQRLQQAMMTLPVLALPDFSSTFELETDASGYGIGAVLMQAKKPIAYFSHTLAVRDRVKPVYERELMAVVMAVQRWRPYLLGKPFI
VRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPSAVQFSSLTAPALIDLLVVKKEVEEDTRLRKVWDELQSGEENTERKFSIRHGMLRYK
DRLVLSQSSALIPAILYTYHDSVIGGHSGFLRTYKRITGELYWAGMKTDIKRYCDECLICQKNKSLALTPAGLLLPLEVPTNIWSDISMDFIEGLPKSCGFETIFVVVDR
FSKYGHFLALKHPFTAKTVAEVFVKEIVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNT
TFHRSLGITPFQAVYGRTPPPLLYYGDQSTSNFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVT
ERIGLVAYKLQLPKSSCIHPVFHVSQLRKMVGNHTMLKPEEMACLNENYEWLAIPEEIYGYSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFHLEDKVHLEREC
NDRPPIIHQYSRRKKKQG