; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G27720 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G27720
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA helicase
Genome locationChr4:24380376..24386382
RNA-Seq ExpressionCSPI04G27720
SyntenyCSPI04G27720
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003678 - DNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454766.1 PREDICTED: ATP-dependent DNA helicase homolog RECG, chloroplastic [Cucumis melo]1.0e-6892.96Show/hide
Query:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
        ++  GIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRP SIKEADLARKR MFDEFFYLQLARLFQMLE LGTRIEKDCLLDKYRQPHLNAAYMKDWA 
Subjt:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY

Query:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL
        LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQG +
Subjt:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL

XP_011659838.1 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 [Cucumis sativus]7.5e-7295.77Show/hide
Query:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
        ++  GIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
Subjt:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY

Query:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL
        LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQG +
Subjt:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL

XP_022974144.1 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 [Cucurbita maxima]1.2e-6183.1Show/hide
Query:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
        ++  GI+ALP+N+DPIPEDITQ FGLLRL DAYNGIH+P SI EADLARKR +FDEFFYLQLARLFQMLEGLGT IEKD LLDKYRQP LNAAYMK+W  
Subjt:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY

Query:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL
        LTQKFLKALPYSLT SQMKA+AEIIWDLKRPIPMNRLLQG +
Subjt:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL

XP_022974240.1 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X2 [Cucurbita maxima]1.2e-6183.1Show/hide
Query:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
        ++  GI+ALP+N+DPIPEDITQ FGLLRL DAYNGIH+P SI EADLARKR +FDEFFYLQLARLFQMLEGLGT IEKD LLDKYRQP LNAAYMK+W  
Subjt:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY

Query:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL
        LTQKFLKALPYSLT SQMKA+AEIIWDLKRPIPMNRLLQG +
Subjt:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL

XP_031742292.1 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X2 [Cucumis sativus]7.5e-7295.77Show/hide
Query:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
        ++  GIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
Subjt:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY

Query:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL
        LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQG +
Subjt:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL

TrEMBL top hitse value%identityAlignment
A0A1S3C041 DNA helicase4.9e-6992.96Show/hide
Query:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
        ++  GIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRP SIKEADLARKR MFDEFFYLQLARLFQMLE LGTRIEKDCLLDKYRQPHLNAAYMKDWA 
Subjt:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY

Query:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL
        LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQG +
Subjt:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL

A0A6J1FSV3 DNA helicase1.0e-6183.1Show/hide
Query:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
        ++  GI+ALP+N+DPIPEDITQ FGLLRL DAYNGIH+P SI EADLARKR +FDEFFYLQLARLFQMLEGLGT IEKD LLDKYRQP LNAAYMK+W  
Subjt:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY

Query:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL
        LTQKFLKALPYSLT SQMKA+AEIIWDLKRPIPMNRLLQG +
Subjt:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL

A0A6J1FUH2 DNA helicase1.0e-6183.1Show/hide
Query:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
        ++  GI+ALP+N+DPIPEDITQ FGLLRL DAYNGIH+P SI EADLARKR +FDEFFYLQLARLFQMLEGLGT IEKD LLDKYRQP LNAAYMK+W  
Subjt:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY

Query:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL
        LTQKFLKALPYSLT SQMKA+AEIIWDLKRPIPMNRLLQG +
Subjt:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL

A0A6J1IDF6 DNA helicase5.8e-6283.1Show/hide
Query:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
        ++  GI+ALP+N+DPIPEDITQ FGLLRL DAYNGIH+P SI EADLARKR +FDEFFYLQLARLFQMLEGLGT IEKD LLDKYRQP LNAAYMK+W  
Subjt:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY

Query:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL
        LTQKFLKALPYSLT SQMKA+AEIIWDLKRPIPMNRLLQG +
Subjt:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL

A0A6J1IFJ2 DNA helicase5.8e-6283.1Show/hide
Query:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
        ++  GI+ALP+N+DPIPEDITQ FGLLRL DAYNGIH+P SI EADLARKR +FDEFFYLQLARLFQMLEGLGT IEKD LLDKYRQP LNAAYMK+W  
Subjt:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY

Query:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL
        LTQKFLKALPYSLT SQMKA+AEIIWDLKRPIPMNRLLQG +
Subjt:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL

SwissProt top hitse value%identityAlignment
F4INA9 ATP-dependent DNA helicase homolog RECG, chloroplastic2.2e-5065.49Show/hide
Query:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
        V+   +  LP N+DPIP++IT+ FGL  L DAY GIH P ++ EADLARKRL+FDEFFYLQLARL+QML+ LGT+IEKD LL+K+R+P LN+ Y+++W+ 
Subjt:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY

Query:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL
        LT+ FLKALPYSLT SQ+ A++EIIWDLKRP+PMNRLLQG +
Subjt:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL

O34942 ATP-dependent DNA helicase RecG8.5e-1031.69Show/hide
Query:  LVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQL-ARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
        L +  D+LP   DP+PE + + + L     A   +H+P + +   LAR+R +++EF   QL  + F+  E   T+          RQ   N   M     
Subjt:  LVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQL-ARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY

Query:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL
           +F+K+LP+ LT +Q + + EI  D+  P  MNRLLQG +
Subjt:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL

O51528 ATP-dependent DNA helicase RecG3.2e-0932.81Show/hide
Query:  IPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY-LTQKFLKALPYSLT
        IP  + + + LL L DA   IH P+S++  + A+K L++ E F LQ                      +YR   +     KD +  L +K + +LP+ LT
Subjt:  IPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY-LTQKFLKALPYSLT

Query:  VSQMKAIAEIIWDLKRPIPMNRLLQGSL
          Q  +I EI +DL    PMNRLLQG +
Subjt:  VSQMKAIAEIIWDLKRPIPMNRLLQGSL

P96130 ATP-dependent DNA helicase RecG6.5e-1031.3Show/hide
Query:  IPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLG----TRIEKDCLLDKYRQPHLNAAYMKDWAYLTQKFLKALPY
        +P+ I + + LL  RD    +H P ++ +    +  L+F+EFF LQ+    + L+  G    T+ E D       Q     + + + + L +K  + LP+
Subjt:  IPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLG----TRIEKDCLLDKYRQPHLNAAYMKDWAYLTQKFLKALPY

Query:  SLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL
         LTV Q + I EI  DL+R  PM RL+QG +
Subjt:  SLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL

Q55681 ATP-dependent DNA helicase RecG8.0e-1636.43Show/hide
Query:  DPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAYLTQKFLKALPYSL
        DP+P++I + + L+ L+ A   IH P + ++  LAR+RL+FDEFFYLQL  L +  E               ++    +A       L +KF   LP+ L
Subjt:  DPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAYLTQKFLKALPYSL

Query:  TVSQMKAIAEIIWDLKRPIPMNRLLQGSL
        T +Q + + EI+ DL +P PMNRL+QG +
Subjt:  TVSQMKAIAEIIWDLKRPIPMNRLLQGSL

Arabidopsis top hitse value%identityAlignment
AT2G01440.1 DEAD/DEAH box RNA helicase family protein1.6e-5165.49Show/hide
Query:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY
        V+   +  LP N+DPIP++IT+ FGL  L DAY GIH P ++ EADLARKRL+FDEFFYLQLARL+QML+ LGT+IEKD LL+K+R+P LN+ Y+++W+ 
Subjt:  VLVEGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAY

Query:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL
        LT+ FLKALPYSLT SQ+ A++EIIWDLKRP+PMNRLLQG +
Subjt:  LTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPMNRLLQGSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTAATCTTTGTTGAACCAAATACAGTAAGGGGTGTTCTCTACTTTGCATCTTTCTACTTCCATTTTCACCAAAATCAGACTGCCGTTGAAACAGGGATGGACAA
GAAGATTTGGGCTCTAGGGTACTTACCCAAGAAAGATGACAAACGCCGGAGGAGAAAAAGGGAGCCGGAGCTCCAAAGGGCCATTGCGCTTGGGCATTTTAAAACACTGA
ATCTAATATCAATATCAGACCAGTTTGTCTCTATTATTGTCCTTGTTGAAGGCATAGATGCATTGCCTATCAATGTGGATCCCATTCCAGAAGACATAACTCAGGGTTTT
GGGCTGTTACGTCTTCGTGATGCATATAACGGGATTCATCGGCCAAATAGTATAAAGGAAGCTGATTTGGCTCGCAAACGTCTTATGTTTGATGAGTTTTTTTACCTGCA
GTTGGCACGCTTGTTCCAAATGCTGGAAGGTCTGGGTACAAGAATAGAGAAAGATTGTTTGCTGGACAAGTATCGTCAACCTCATTTAAATGCTGCATATATGAAGGATT
GGGCTTACCTCACCCAAAAGTTCCTTAAAGCCCTTCCGTATTCCCTTACAGTGAGTCAGATGAAAGCTATTGCAGAAATTATATGGGACTTGAAGCGACCAATTCCTATG
AATAGGCTCTTGCAGGGGAGTCTGGAGGTGGAGGACACAAGAAGATATTCGGTTGATAAAATGAGCTGCGTCTCAAAAAATGGAGATGACCTCGGATTTGTCGAAGATGT
GAAAGATCCCTGTAAGACGAGTATGGTCATCAATGAAGGTCACAAGCCACCGTTTATATCGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTAATCTTTGTTGAACCAAATACAGTAAGGGGTGTTCTCTACTTTGCATCTTTCTACTTCCATTTTCACCAAAATCAGACTGCCGTTGAAACAGGGATGGACAA
GAAGATTTGGGCTCTAGGGTACTTACCCAAGAAAGATGACAAACGCCGGAGGAGAAAAAGGGAGCCGGAGCTCCAAAGGGCCATTGCGCTTGGGCATTTTAAAACACTGA
ATCTAATATCAATATCAGACCAGTTTGTCTCTATTATTGTCCTTGTTGAAGGCATAGATGCATTGCCTATCAATGTGGATCCCATTCCAGAAGACATAACTCAGGGTTTT
GGGCTGTTACGTCTTCGTGATGCATATAACGGGATTCATCGGCCAAATAGTATAAAGGAAGCTGATTTGGCTCGCAAACGTCTTATGTTTGATGAGTTTTTTTACCTGCA
GTTGGCACGCTTGTTCCAAATGCTGGAAGGTCTGGGTACAAGAATAGAGAAAGATTGTTTGCTGGACAAGTATCGTCAACCTCATTTAAATGCTGCATATATGAAGGATT
GGGCTTACCTCACCCAAAAGTTCCTTAAAGCCCTTCCGTATTCCCTTACAGTGAGTCAGATGAAAGCTATTGCAGAAATTATATGGGACTTGAAGCGACCAATTCCTATG
AATAGGCTCTTGCAGGGGAGTCTGGAGGTGGAGGACACAAGAAGATATTCGGTTGATAAAATGAGCTGCGTCTCAAAAAATGGAGATGACCTCGGATTTGTCGAAGATGT
GAAAGATCCCTGTAAGACGAGTATGGTCATCAATGAAGGTCACAAGCCACCGTTTATATCGTTGTGA
Protein sequenceShow/hide protein sequence
MGVIFVEPNTVRGVLYFASFYFHFHQNQTAVETGMDKKIWALGYLPKKDDKRRRRKREPELQRAIALGHFKTLNLISISDQFVSIIVLVEGIDALPINVDPIPEDITQGF
GLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAYLTQKFLKALPYSLTVSQMKAIAEIIWDLKRPIPM
NRLLQGSLEVEDTRRYSVDKMSCVSKNGDDLGFVEDVKDPCKTSMVINEGHKPPFISL