; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G27750 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G27750
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionBeta-galactosidase
Genome locationChr4:24409860..24410105
RNA-Seq ExpressionCSPI04G27750
SyntenyCSPI04G27750
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0005773 - vacuole (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
InterPro domainsIPR001944 - Glycoside hydrolase, family 35


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045403.1 beta-galactosidase-like [Cucumis melo var. makuwa]5.7e-2882.28Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL
        YDYD  LDEYGN NQPK  HLKQL++SIKL +KILTNGT+SNQDYG+SVTL KFSNPSTGERFCFLSNT+GSNDATI L
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL

KAE8648136.1 hypothetical protein Csa_021532 [Cucumis sativus]1.3e-3598.72Show/hide
Query:  PYDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI
        PYDYDELLDEYGNSNQPKL HLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI
Subjt:  PYDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI

KAE8650649.1 hypothetical protein Csa_023687 [Cucumis sativus]1.4e-2679.75Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL
        YDY+  LDEYGN NQPK  HLKQL+ASIKL +KILTN TRSNQ++GSSVTL KFSNP+TGERFCFLSNTDG NDATI L
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL

XP_008459141.1 PREDICTED: beta-galactosidase 15-like [Cucumis melo]4.4e-2883.54Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL
        YDYD  LDEYG+ NQPK  HLKQL+ASIKL +KILTNGTRSNQDYG SVTL KFSNPSTGERFCFLSNT+GSNDATI L
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL

XP_008464891.1 PREDICTED: beta-galactosidase-like [Cucumis melo]5.7e-2882.28Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL
        YDYD  LDEYGN NQPK  HLKQL++SIKL +KILTNGT+SNQDYG+SVTL KFSNPSTGERFCFLSNT+GSNDATI L
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL

TrEMBL top hitse value%identityAlignment
A0A0A0M006 Beta-galactosidase6.8e-2779.75Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL
        YDY+  LDEYGN NQPK  HLKQL+ASIKL +KILTN TRSNQ++GSSVTL KFSNP+TGERFCFLSNTDG NDATI L
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL

A0A1S3C8Z9 Beta-galactosidase2.1e-2883.54Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL
        YDYD  LDEYG+ NQPK  HLKQL+ASIKL +KILTNGTRSNQDYG SVTL KFSNPSTGERFCFLSNT+GSNDATI L
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL

A0A1S3CP45 Beta-galactosidase2.8e-2882.28Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL
        YDYD  LDEYGN NQPK  HLKQL++SIKL +KILTNGT+SNQDYG+SVTL KFSNPSTGERFCFLSNT+GSNDATI L
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL

A0A5A7TPD9 Beta-galactosidase2.8e-2882.28Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL
        YDYD  LDEYGN NQPK  HLKQL++SIKL +KILTNGT+SNQDYG+SVTL KFSNPSTGERFCFLSNT+GSNDATI L
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL

A0A5D3CWN8 Beta-galactosidase8.9e-2778.48Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL
        YDY+ LLDEYGN NQPK  HLKQL+ASIKL +KILTNGTRS+Q++G+SVTL KF NP+TGERFCFLSNTDG NDATI L
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL

SwissProt top hitse value%identityAlignment
P49676 Beta-galactosidase8.6e-1146.75Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI
        YDYD  LDEYGN NQPK  HLKQL+  +K  +K LT G  S  D G+SVT   +S  +  +  CF+ N + + DA +
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI

Q67VU7 Putative beta-galactosidase 102.5e-1043.04Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL
        YDYD  LDEYGN  QPK  HLK L++ IK  +KIL +G   + +Y   VT+ K++  ST    CF++N + + D  + L
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL

Q7G3T8 Beta-galactosidase 131.9e-1043.04Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL
        YDYD  LDEYGN  QPK  HLK L++ IK  +KIL +G   + +Y  +VT+ K++  ST    CF++N + + D  + L
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL

Q7XFK2 Beta-galactosidase 141.2e-0940.51Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL
        YDYD  LDEYGN  QPK  HLK+L++ +   +KIL +G   + +YG +VT+ K++  +T    CF++N     D  + L
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL

Q8RUV9 Beta-galactosidase 19.5e-1039.24Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL
        YDYD  LDEYGN  QPK  HLK+L++ +K  +K L +G   + +YG ++T+ K++  S+    CF++N     D  + L
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL

Arabidopsis top hitse value%identityAlignment
AT1G31740.1 beta-galactosidase 152.0e-1042.86Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI
        YDYD  LDE+GN NQPK  HLKQL+  +   +K LT G  S  D+G+ VT   +         CF+ N + ++DA I
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI

AT2G04060.1 glycosyl hydrolase family 35 protein4.1e-0841.43Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTD
        YDYD  LDE+GN NQPK  HLKQL+      +K LT G  S  D+G+ V    +         CF+ N +
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTD

AT2G28470.1 beta-galactosidase 81.3e-0637.66Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI
        YDYD  +DEYG   QPK  HL+ L+ +IKL +  L     +    GS++    +   S G    FL+N D  +DAT+
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI

AT5G20710.1 beta-galactosidase 72.8e-0940.26Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI
        YDY   LDE+GN NQPK  HLKQL+  +K  +K LT G  S  D G+S+    ++        CF+ N + + DA +
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI

AT5G63810.1 beta-galactosidase 109.1e-0837.66Show/hide
Query:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI
        YDY+  +DEYG    PK  HLK L+ +I L + +L +G   N   G S+    +++ S+G    FLSN D  ND  +
Subjt:  YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTATGATTATGATGAACTACTCGATGAATATGGGAACTCAAATCAACCCAAATTGAGGCATCTCAAACAACTCTATGCATCCATCAAATTGGAAGATAAGATCCT
CACAAATGGCACTCGCTCGAACCAAGATTATGGTAGTTCTGTCACTTTAATGAAGTTCTCCAACCCATCAACAGGGGAGAGGTTTTGCTTCTTAAGCAACACAGATGGTA
GCAATGATGCAACCATAGGTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTATGATTATGATGAACTACTCGATGAATATGGGAACTCAAATCAACCCAAATTGAGGCATCTCAAACAACTCTATGCATCCATCAAATTGGAAGATAAGATCCT
CACAAATGGCACTCGCTCGAACCAAGATTATGGTAGTTCTGTCACTTTAATGAAGTTCTCCAACCCATCAACAGGGGAGAGGTTTTGCTTCTTAAGCAACACAGATGGTA
GCAATGATGCAACCATAGGTTTGTAA
Protein sequenceShow/hide protein sequence
MPYDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIGL