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CSPI04G27820 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G27820
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:24549666..24550091
RNA-Seq ExpressionCSPI04G27820
SyntenyCSPI04G27820
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067069.1 hypothetical protein E6C27_scaffold38G001190 [Cucumis melo var. makuwa]1.4e-1352.07Show/hide
Query:  TVSNLLRVINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKI
        T+ NL R+INLH +K K K LKTKKEG+   V+EVE+KE+EE E     +KQ P+KRKRKG++E    ++K+R L+  DS+DP YL +TIVP DQ PK+ 
Subjt:  TVSNLLRVINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKI

Query:  ISPSPSKTLKPNKSKTTTSPS
        IS   SKT     +K  +SPS
Subjt:  ISPSPSKTLKPNKSKTTTSPS

KAE8637516.1 hypothetical protein CSA_004749 [Cucumis sativus]4.7e-6297.87Show/hide
Query:  MPDFRKTLQDSGEGCGLRTVSNLLRVINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKD
        MPDFRKTLQDSGEGCGLRTVSNLLRVINLHLSKAKDKRLKTKKEGKVEEVNEVESKE+EEEEEEMEDEKQTP+KRKRKGKDETLGSRKKVRKLETNDSKD
Subjt:  MPDFRKTLQDSGEGCGLRTVSNLLRVINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKD

Query:  PSYLVVTIVPDDQMPKKIISPSPSKTLKPNKSKTTTSPSKV
        PSYLVV IVPDDQMPKKIISPSPSKTLKPNKSKTTTSPSKV
Subjt:  PSYLVVTIVPDDQMPKKIISPSPSKTLKPNKSKTTTSPSKV

KGN51011.1 hypothetical protein Csa_009225 [Cucumis sativus]2.0e-0445.22Show/hide
Query:  VINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKIISPSPSK
        +INLH +KA+ KRLK+K   K+E + E +  E + +EEE E EKQTP+  KRKGKDE  GS+K+ +K    +SKDP  L +      Q  K   S S S 
Subjt:  VINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKIISPSPSK

Query:  TLKPNKSKTTTSPSK
        T  P K   TT PS+
Subjt:  TLKPNKSKTTTSPSK

KGN66753.1 hypothetical protein Csa_007650 [Cucumis sativus]3.1e-0546.02Show/hide
Query:  VINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKIISPSPSK
        +INLH +KAK+K LKTKK  KV E +EVE     E++EEMEDE Q+P+  KRKG +E   SRKK +K +  DS++P  LV+   P  Q      SP PSK
Subjt:  VINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKIISPSPSK

Query:  TLKPNKSKTTTSP
         L         +P
Subjt:  TLKPNKSKTTTSP

TYK03494.1 hypothetical protein E5676_scaffold121G001140 [Cucumis melo var. makuwa]1.5e-1562.96Show/hide
Query:  AKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKIISPSPSKTLKPN-KS
        AKDK LKTKKE KV EVNEVESK     EEE E ++ TP++ KRKG++E   SRK+V+KLE  DS DP  LVV  +PDD++P  IISPSP KTLK + KS
Subjt:  AKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKIISPSPSKTLKPN-KS

Query:  KTTTSPSK
        KTTTSP K
Subjt:  KTTTSPSK

TrEMBL top hitse value%identityAlignment
A0A0A0KTK5 Uncharacterized protein9.7e-0545.22Show/hide
Query:  VINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKIISPSPSK
        +INLH +KA+ KRLK+K   K+E + E +  E + +EEE E EKQTP+  KRKGKDE  GS+K+ +K    +SKDP  L +      Q  K   S S S 
Subjt:  VINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKIISPSPSK

Query:  TLKPNKSKTTTSPSK
        T  P K   TT PS+
Subjt:  TLKPNKSKTTTSPSK

A0A0A0LY93 Uncharacterized protein1.5e-0546.02Show/hide
Query:  VINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKIISPSPSK
        +INLH +KAK+K LKTKK  KV E +EVE     E++EEMEDE Q+P+  KRKG +E   SRKK +K +  DS++P  LV+   P  Q      SP PSK
Subjt:  VINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKIISPSPSK

Query:  TLKPNKSKTTTSP
         L         +P
Subjt:  TLKPNKSKTTTSP

A0A5A7VKE9 Uncharacterized protein6.3e-0441.8Show/hide
Query:  TVSNLLRVINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKI
        T S L RVI +H +KA+ K LKTK+ G++ EV  V+ K++EEE E    E   P+K KR+G++E LGS KK +  +  DSKD      T  P  + P   
Subjt:  TVSNLLRVINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKI

Query:  ISPSPSKTLKPNKSKTTTSPSK
         SP  SK  K   S+T +SP +
Subjt:  ISPSPSKTLKPNKSKTTTSPSK

A0A5A7VP61 Uncharacterized protein6.7e-1452.07Show/hide
Query:  TVSNLLRVINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKI
        T+ NL R+INLH +K K K LKTKKEG+   V+EVE+KE+EE E     +KQ P+KRKRKG++E    ++K+R L+  DS+DP YL +TIVP DQ PK+ 
Subjt:  TVSNLLRVINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKI

Query:  ISPSPSKTLKPNKSKTTTSPS
        IS   SKT     +K  +SPS
Subjt:  ISPSPSKTLKPNKSKTTTSPS

A0A5D3BWJ9 Uncharacterized protein7.2e-1662.96Show/hide
Query:  AKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKIISPSPSKTLKPN-KS
        AKDK LKTKKE KV EVNEVESK     EEE E ++ TP++ KRKG++E   SRK+V+KLE  DS DP  LVV  +PDD++P  IISPSP KTLK + KS
Subjt:  AKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVPDDQMPKKIISPSPSKTLKPN-KS

Query:  KTTTSPSK
        KTTTSP K
Subjt:  KTTTSPSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGACTTTAGAAAAACTCTCCAAGACAGTGGTGAAGGATGTGGGTTGCGTACTGTATCCAATCTTCTTCGTGTAATCAATCTCCACTTAAGCAAAGCGAAAGACAA
ACGCCTCAAGACCAAGAAAGAGGGAAAAGTAGAGGAAGTTAATGAAGTGGAGTCTAAAGAAAAAGAAGAAGAAGAAGAAGAAATGGAGGATGAAAAGCAAACCCCAGTTA
AACGCAAGAGAAAAGGCAAGGACGAGACTTTAGGATCAAGAAAGAAAGTTAGGAAACTTGAAACCAATGACTCTAAGGATCCTTCATATCTTGTGGTCACCATAGTGCCA
GATGACCAAATGCCTAAGAAAATCATCTCACCGTCGCCATCCAAAACCCTCAAGCCTAATAAATCCAAAACCACCACTTCACCGTCTAAAGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGACTTTAGAAAAACTCTCCAAGACAGTGGTGAAGGATGTGGGTTGCGTACTGTATCCAATCTTCTTCGTGTAATCAATCTCCACTTAAGCAAAGCGAAAGACAA
ACGCCTCAAGACCAAGAAAGAGGGAAAAGTAGAGGAAGTTAATGAAGTGGAGTCTAAAGAAAAAGAAGAAGAAGAAGAAGAAATGGAGGATGAAAAGCAAACCCCAGTTA
AACGCAAGAGAAAAGGCAAGGACGAGACTTTAGGATCAAGAAAGAAAGTTAGGAAACTTGAAACCAATGACTCTAAGGATCCTTCATATCTTGTGGTCACCATAGTGCCA
GATGACCAAATGCCTAAGAAAATCATCTCACCGTCGCCATCCAAAACCCTCAAGCCTAATAAATCCAAAACCACCACTTCACCGTCTAAAGTGTGA
Protein sequenceShow/hide protein sequence
MPDFRKTLQDSGEGCGLRTVSNLLRVINLHLSKAKDKRLKTKKEGKVEEVNEVESKEKEEEEEEMEDEKQTPVKRKRKGKDETLGSRKKVRKLETNDSKDPSYLVVTIVP
DDQMPKKIISPSPSKTLKPNKSKTTTSPSKV