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CSPI05G00490 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G00490
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionS-protein homolog
Genome locationChr5:690375..690680
RNA-Seq ExpressionCSPI05G00490
SyntenyCSPI05G00490
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648168.1 hypothetical protein Csa_018354 [Cucumis sativus]1.4e-5598Show/hide
Query:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLLRMPS
        MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFV QFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLLR+PS
Subjt:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLLRMPS

KAE8648174.1 hypothetical protein Csa_018375 [Cucumis sativus]6.4e-4595.4Show/hide
Query:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQL
        MDCHCWSKD+DLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFV QFCPNFLCVWIA+QDGLYMLN AGQL
Subjt:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQL

KAG6600849.1 S-protein-like 74, partial [Cucurbita argyrosperma subsp. sororia]3.1e-3972.73Show/hide
Query:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLLRMP
        +D HC+SKD+DLGL IL PD++QSW FR NF G TLFHCRLEWERGF+EFDAFFVDE F  ++C NF C+WIAKQDG+YMLN+AGQ VF+H WKLLR+P
Subjt:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLLRMP

KAG7031483.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-3972.73Show/hide
Query:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLLRMP
        +D HC+SKD+DLGL IL PD++QSW FR NF G TLFHCRLEWERGF+EFDAFFVDE F  ++C NF C+WIAKQDG+YMLN+AGQ VF+H WKLLR+P
Subjt:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLLRMP

XP_023546939.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]1.5e-3871.72Show/hide
Query:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLLRMP
        +D HC+SKD+DLGL IL PD++QSW FR N  G TLFHCRLEWERGF+EFDAFFVDE F  ++C NF C+WIAKQDG+YMLN+AGQ VF+H WKLLR+P
Subjt:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLLRMP

TrEMBL top hitse value%identityAlignment
A0A0A0KL79 S-protein homolog5.9e-2854.64Show/hide
Query:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLLR
        +D HC+SKD+DLGL IL PDE+Q W F+ N++ TT FHCRLEWE G+ EFD+F    DFV  +C N  C+W A+QDG+Y+ N AG+ VF+++W+++R
Subjt:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLLR

A0A0A0KSN2 S-protein homolog9.7e-2351.04Show/hide
Query:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLL
        +D HC+SKDNDLGL IL P E Q W F+ N   TT F C LEWE G  EFD+F  + +F+  FC N  C W A+QDG+Y+ N  G+ VF  +W +L
Subjt:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLL

A0A1S3BUQ9 S-protein homolog3.8e-2752.58Show/hide
Query:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLLR
        +D HC+SKD+DLG ++L P++ QSW FR N++GTT FHC+LEWE G+ EFDAF  D  F+  FC    C W A+QDG+Y+ N+ GQ+VF+ +W+++R
Subjt:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLLR

A0A6J1F5H5 S-protein homolog1.8e-2452.58Show/hide
Query:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDED-FVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLL
        +D HC SKD+DLGL IL PDE Q W F  N++GTT FHCRLEW+ G  EFDAF  + D  +  +C N  C+W A+QDG+Y+ N+   LVF+ +W +L
Subjt:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDED-FVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLL

A0A6J1FMU2 S-protein homolog5.0e-2756.25Show/hide
Query:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLL
        +D HC SKD+DLG++++ PD+ Q W FR N++G+T FHC+LEW  GF EFDAF  D +FV  FC +  CVW AKQDGLY+ ++ GQLVF  HW+L+
Subjt:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLL

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 23.2e-0735.8Show/hide
Query:  HCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDF-VYQFCPNFLCVWIAKQDGLYMLNE
        HC SKD+DLG + L P E  S+ F R F G TL+ C   W      FD +    D      C +  CVW  +++G    N+
Subjt:  HCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDF-VYQFCPNFLCVWIAKQDGLYMLNE

F4JLS0 S-protein homolog 14.5e-0935.48Show/hide
Query:  HCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEA-GQLVFHHHWKL
        HC SK++DLG   L    R SW F  N + +T F C +  + G    + F+ D+  ++  C    C+W AK DGLY+ N A G+ V    W++
Subjt:  HCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEA-GQLVFHHHWKL

Q2HQ46 S-protein homolog 742.4e-1040.22Show/hide
Query:  HCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEA-GQLVFHHHWK
        HC SK+NDLG   L   +R SW F  N + +TLF C +  + G      F+ D+  ++  C    CVW AK DGLY+ N A G+ V    WK
Subjt:  HCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEA-GQLVFHHHWK

Q3E9W6 S-protein homolog 202.9e-0842.11Show/hide
Query:  HCWSKDNDLGLQILLPDERQSWPFRR--NFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDG
        HC SKD DLG Q L P  +Q W FR+  +F G TLF C  EWE   + FD      D     C    CVW  +  G
Subjt:  HCWSKDNDLGLQILLPDERQSWPFRR--NFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDG

Q9FMQ4 S-protein homolog 33.1e-1036.9Show/hide
Query:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEA
        ++ HC S D+DLGL+IL P+   S+ FR + +GTTLF+C   W    + FD +  D D V        C+W     G  M +E+
Subjt:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEA

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family2.3e-0835.8Show/hide
Query:  HCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDF-VYQFCPNFLCVWIAKQDGLYMLNE
        HC SKD+DLG + L P E  S+ F R F G TL+ C   W      FD +    D      C +  CVW  +++G    N+
Subjt:  HCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDF-VYQFCPNFLCVWIAKQDGLYMLNE

AT4G16295.1 S-protein homologue 13.2e-1035.48Show/hide
Query:  HCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEA-GQLVFHHHWKL
        HC SK++DLG   L    R SW F  N + +T F C +  + G    + F+ D+  ++  C    C+W AK DGLY+ N A G+ V    W++
Subjt:  HCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEA-GQLVFHHHWKL

AT4G24975.1 Plant self-incompatibility protein S1 family2.1e-0942.11Show/hide
Query:  HCWSKDNDLGLQILLPDERQSWPFRR--NFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDG
        HC SKD DLG Q L P  +Q W FR+  +F G TLF C  EWE   + FD      D     C    CVW  +  G
Subjt:  HCWSKDNDLGLQILLPDERQSWPFRR--NFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDG

AT4G29035.1 Plant self-incompatibility protein S1 family1.7e-1140.22Show/hide
Query:  HCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEA-GQLVFHHHWK
        HC SK+NDLG   L   +R SW F  N + +TLF C +  + G      F+ D+  ++  C    CVW AK DGLY+ N A G+ V    WK
Subjt:  HCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEA-GQLVFHHHWK

AT5G12060.1 Plant self-incompatibility protein S1 family2.2e-1136.9Show/hide
Query:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEA
        ++ HC S D+DLGL+IL P+   S+ FR + +GTTLF+C   W    + FD +  D D V        C+W     G  M +E+
Subjt:  MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGTCATTGTTGGTCCAAAGATAACGATTTAGGGTTACAAATACTTCTTCCAGATGAAAGGCAAAGTTGGCCCTTCAGAAGGAACTTTATGGGAACAACATTATT
CCATTGTAGATTGGAATGGGAAAGAGGGTTTAGGGAATTTGATGCATTTTTTGTTGACGAAGATTTCGTTTATCAATTTTGTCCCAACTTTCTATGCGTTTGGATAGCCA
AACAAGATGGGCTTTACATGCTGAATGAAGCTGGTCAACTTGTTTTTCATCATCATTGGAAATTGCTCCGAATGCCCTCCTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGTCATTGTTGGTCCAAAGATAACGATTTAGGGTTACAAATACTTCTTCCAGATGAAAGGCAAAGTTGGCCCTTCAGAAGGAACTTTATGGGAACAACATTATT
CCATTGTAGATTGGAATGGGAAAGAGGGTTTAGGGAATTTGATGCATTTTTTGTTGACGAAGATTTCGTTTATCAATTTTGTCCCAACTTTCTATGCGTTTGGATAGCCA
AACAAGATGGGCTTTACATGCTGAATGAAGCTGGTCAACTTGTTTTTCATCATCATTGGAAATTGCTCCGAATGCCCTCCTTGTAA
Protein sequenceShow/hide protein sequence
MDCHCWSKDNDLGLQILLPDERQSWPFRRNFMGTTLFHCRLEWERGFREFDAFFVDEDFVYQFCPNFLCVWIAKQDGLYMLNEAGQLVFHHHWKLLRMPSL