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CSPI05G00550 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G00550
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-type domain-containing protein
Genome locationChr5:752148..753078
RNA-Seq ExpressionCSPI05G00550
SyntenyCSPI05G00550
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600851.1 hypothetical protein SDJN03_06084, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5067.06Show/hide
Query:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPL-IHKSPNFKTCLPRPAPNGCAARRRVRYDD-EDEDEDYGHNHQIALLESYTQAATGEALI
        MA +   +PILHS SL  +      +   + T   FSF   IH S NF+    R   N CAARRRVRYDD EDEDE+YGHN QIALLESYTQAA GEALI
Subjt:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPL-IHKSPNFKTCLPRPAPNGCAARRRVRYDD-EDEDEDYGHNHQIALLESYTQAATGEALI

Query:  VHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF
        VHA +DGD VEVLVFKGFSS LSY TS DPSRSVLP RA I+ IDRIKGPFDPSNI+YIQ+GITW SFNF
Subjt:  VHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF

KAG7031485.1 hypothetical protein SDJN02_05525, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-5068.42Show/hide
Query:  MATNFHKTPILHSISL-TNLFPIL-PTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRYDD-EDEDEDYGHNHQIALLESYTQAATGEAL
        MA +   +PILHS SL T L P     N  P+   + FSF  IH S NF+    R   N CAARRRVRYDD EDEDE+YGHN QIALLESYTQAA GEAL
Subjt:  MATNFHKTPILHSISL-TNLFPIL-PTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRYDD-EDEDEDYGHNHQIALLESYTQAATGEAL

Query:  IVHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF
        IVHA +DGD VEVLVFKGFSS LSY TS DPSRSVLP RA I+ IDRIKGPFDPSNI+YI++GITW SFNF
Subjt:  IVHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF

XP_004142303.2 uncharacterized protein LOC101213440 [Cucumis sativus]2.2e-9097.09Show/hide
Query:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRY--DDEDEDEDYGHNHQIALLESYTQAATGEALI
        MATNFHKTPILHSISLTNLFPILP+NPKPSLTNTPFSFPLIHKSPNFKTCLPRP PN CAARRRVRY  DDEDEDEDYGHNHQIALLESYTQAATGEALI
Subjt:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRY--DDEDEDEDYGHNHQIALLESYTQAATGEALI

Query:  VHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN
        VHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN
Subjt:  VHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN

XP_008452414.1 PREDICTED: uncharacterized protein LOC103493452 [Cucumis melo]4.9e-7486.39Show/hide
Query:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRY-DDEDEDEDYGHNHQIALLESYTQAATGEALIV
        MATN HKTPILHS SLTNLFP  P+NP  SLTN PFSFP IHKSPNFKTC+  P   GCAARRRVRY DDEDEDEDYGHN QIALLESYTQAATGEALIV
Subjt:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRY-DDEDEDEDYGHNHQIALLESYTQAATGEALIV

Query:  HAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF
        HAMVDG+HVEVLVFKGFSS LSYGTSPDPSRSV+PERA IK IDRIKGPFDPSNIQYI+KGITWNSFNF
Subjt:  HAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF

XP_038892698.1 uncharacterized protein LOC120081685 [Benincasa hispida]1.1e-6076.92Show/hide
Query:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRYD-DEDEDEDYGHNHQIALLESYTQAATGEALIV
        MAT+  K PILH  SLT L+P  P+NP  SLT    SFP IHKS NF+T L R   NGCAARRRVRYD D+DEDEDYGHN QIALLESYTQA  GEALIV
Subjt:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRYD-DEDEDEDYGHNHQIALLESYTQAATGEALIV

Query:  HAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF
        HA VDGDHVEVLVFKGFSS LSYGTSPDPSRSVLP RA+IK IDRIKGPFDPSNI+Y++KGITW SFNF
Subjt:  HAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF

TrEMBL top hitse value%identityAlignment
A0A0A0KJ82 Uncharacterized protein1.1e-9097.09Show/hide
Query:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRY--DDEDEDEDYGHNHQIALLESYTQAATGEALI
        MATNFHKTPILHSISLTNLFPILP+NPKPSLTNTPFSFPLIHKSPNFKTCLPRP PN CAARRRVRY  DDEDEDEDYGHNHQIALLESYTQAATGEALI
Subjt:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRY--DDEDEDEDYGHNHQIALLESYTQAATGEALI

Query:  VHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN
        VHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN
Subjt:  VHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN

A0A1S3BTQ8 uncharacterized protein LOC1034934522.4e-7486.39Show/hide
Query:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRY-DDEDEDEDYGHNHQIALLESYTQAATGEALIV
        MATN HKTPILHS SLTNLFP  P+NP  SLTN PFSFP IHKSPNFKTC+  P   GCAARRRVRY DDEDEDEDYGHN QIALLESYTQAATGEALIV
Subjt:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRY-DDEDEDEDYGHNHQIALLESYTQAATGEALIV

Query:  HAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF
        HAMVDG+HVEVLVFKGFSS LSYGTSPDPSRSV+PERA IK IDRIKGPFDPSNIQYI+KGITWNSFNF
Subjt:  HAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF

A0A5A7UTE4 Uncharacterized protein2.4e-7486.39Show/hide
Query:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRY-DDEDEDEDYGHNHQIALLESYTQAATGEALIV
        MATN HKTPILHS SLTNLFP  P+NP  SLTN PFSFP IHKSPNFKTC+  P   GCAARRRVRY DDEDEDEDYGHN QIALLESYTQAATGEALIV
Subjt:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRY-DDEDEDEDYGHNHQIALLESYTQAATGEALIV

Query:  HAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF
        HAMVDG+HVEVLVFKGFSS LSYGTSPDPSRSV+PERA IK IDRIKGPFDPSNIQYI+KGITWNSFNF
Subjt:  HAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF

A0A6J1FWQ3 uncharacterized protein LOC1114476341.6e-4965.88Show/hide
Query:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPL-IHKSPNFKTCLPRPAPNGCAARRRVRYDD-EDEDEDYGHNHQIALLESYTQAATGEALI
        MA +   +PILHS SL  +      +   + T   FSF   IH S NF+        N CAARRRVRYDD EDEDE+YGHN QIALLESYTQAA GEALI
Subjt:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPL-IHKSPNFKTCLPRPAPNGCAARRRVRYDD-EDEDEDYGHNHQIALLESYTQAATGEALI

Query:  VHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF
        VHA +DGD VEVLVFKGFSS LS+ TS DPSRSVLP RA I+ IDRIKGPFDPSNI+YIQ+GITW SFNF
Subjt:  VHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF

A0A6J1JCS8 uncharacterized protein LOC1114832471.4e-5067.06Show/hide
Query:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPL-IHKSPNFKTCLPRPAPNGCAARRRVRYDD-EDEDEDYGHNHQIALLESYTQAATGEALI
        MA +   +PILHS SL  +      +   + T   FSF   IH S NF+    R  PN CAARRRVRYDD EDEDE+YGHN QI+LLESYTQAA GEALI
Subjt:  MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPL-IHKSPNFKTCLPRPAPNGCAARRRVRYDD-EDEDEDYGHNHQIALLESYTQAATGEALI

Query:  VHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF
        VHA +DGD VEVLVFKGFSS LSY TS DPSRSVLP RA I+ IDRIKGPFDPSNI+YIQKG+TW SFNF
Subjt:  VHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01755.1 unknown protein1.6e-3059.09Show/hide
Query:  CAARRRVRYD--DEDEDEDYGHNHQIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQY
        C ARRRVR +   EDEDE YG+N ++A+LE Y+Q+   EALIV A+VD + VEV++FKG SS LS  T+ DP+RSVLPERA+I  IDR++GPFDPS I Y
Subjt:  CAARRRVRYD--DEDEDEDYGHNHQIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQY

Query:  IQKGITWNSF
        IQ+ I++ +F
Subjt:  IQKGITWNSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACAAACTTCCACAAAACCCCAATCCTTCACTCAATTTCTCTTACAAATCTCTTCCCAATACTTCCCACCAATCCAAAACCATCTCTCACCAACACCCCTTTCTC
TTTCCCATTAATCCATAAATCACCCAATTTCAAAACTTGTCTCCCTCGCCCTGCCCCCAATGGTTGCGCTGCTCGGCGGAGAGTTCGTTACGACGACGAAGATGAAGATG
AAGATTACGGCCACAACCATCAGATTGCACTGTTGGAATCCTACACTCAGGCCGCCACAGGAGAAGCACTCATCGTTCATGCCATGGTTGACGGTGACCATGTTGAAGTT
CTTGTCTTCAAGGGATTCTCATCAAGTTTGAGCTATGGGACATCACCTGATCCATCAAGAAGTGTTCTTCCCGAAAGAGCAATCATTAAATTCATTGATAGAATCAAAGG
CCCATTTGATCCATCAAATATCCAATACATTCAGAAGGGTATCACTTGGAATTCATTTAACTTCCTCAATTAA
mRNA sequenceShow/hide mRNA sequence
AAACAAAAATTATAAAACAAAAGTAGAGAGACTGAATAGCTTCCACCTTATCTGCAATGGTCAAAATTCCTCCACATTTTCCTTCAACTTTCATCCAACAAAACACATAA
TTCAAAACCAAAAATGGCAACAAACTTCCACAAAACCCCAATCCTTCACTCAATTTCTCTTACAAATCTCTTCCCAATACTTCCCACCAATCCAAAACCATCTCTCACCA
ACACCCCTTTCTCTTTCCCATTAATCCATAAATCACCCAATTTCAAAACTTGTCTCCCTCGCCCTGCCCCCAATGGTTGCGCTGCTCGGCGGAGAGTTCGTTACGACGAC
GAAGATGAAGATGAAGATTACGGCCACAACCATCAGATTGCACTGTTGGAATCCTACACTCAGGCCGCCACAGGAGAAGCACTCATCGTTCATGCCATGGTTGACGGTGA
CCATGTTGAAGTTCTTGTCTTCAAGGGATTCTCATCAAGTTTGAGCTATGGGACATCACCTGATCCATCAAGAAGTGTTCTTCCCGAAAGAGCAATCATTAAATTCATTG
ATAGAATCAAAGGCCCATTTGATCCATCAAATATCCAATACATTCAGAAGGGTATCACTTGGAATTCATTTAACTTCCTCAATTAATTCATATCAACTTCTTTTCTTCCA
ATTCATTTTTACCATTTTCTTAACTTTAATCGCA
Protein sequenceShow/hide protein sequence
MATNFHKTPILHSISLTNLFPILPTNPKPSLTNTPFSFPLIHKSPNFKTCLPRPAPNGCAARRRVRYDDEDEDEDYGHNHQIALLESYTQAATGEALIVHAMVDGDHVEV
LVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN