CuGenDBv2

Gene ID	CSPI05G00650
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	binding partner of ACD11 1-like
Genome location	Chr5:874479..876957
RNA-Seq Expression	CSPI05G00650
Synteny	CSPI05G00650
Gene Ontology terms	GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR000504 - RNA recognition motif domain IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily IPR035979 - RNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004142266.1 binding partner of ACD11 1 [Cucumis sativus]

3.1e-142

100

Show/hide

Query:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA
        MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA
Subjt:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

XP_008452423.1 PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]

4.5e-141

99.28

Show/hide

Query:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA
        MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA
Subjt:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKATSAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

XP_008452424.1 PREDICTED: binding partner of ACD11 1-like isoform X2 [Cucumis melo]

5.0e-140

99.28

Show/hide

Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
        MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKATSAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

XP_022941588.1 binding partner of ACD11 1-like isoform X3 [Cucurbita moschata]

1.1e-134

94.96

Show/hide

Query:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA
        MSMRTVKVSNISK TSERDI+EFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTVTG A
Subjt:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS
        PNQAEDVVSTMLAKGFILGKDA+NKAKAFDER QLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQV EKTKSALAVAEQKA+SAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        NYYV TGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEKKESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

XP_038891484.1 binding partner of ACD11 1 [Benincasa hispida]

1.9e-139

97.84

Show/hide

Query:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA
        MSMRTVKVSNISK+TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDK+QTV GIA
Subjt:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKATSAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KIR7 RRM domain-containing protein

1.5e-142

100

Show/hide

Query:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA
        MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA
Subjt:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

A0A1S3BT66 binding partner of ACD11 1-like isoform X2

2.4e-140

99.28

Show/hide

Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
        MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKATSAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

A0A1S3BUX7 binding partner of ACD11 1-like isoform X1

2.2e-141

99.28

Show/hide

Query:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA
        MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA
Subjt:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKATSAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

A0A5A7UTK1 Binding partner of ACD11 1-like isoform X1

2.4e-140

99.28

Show/hide

Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
        MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKATSAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

A0A6J1FSI4 binding partner of ACD11 1-like isoform X3

5.2e-135

94.96

Show/hide

Query:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA
        MSMRTVKVSNISK TSERDI+EFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTVTG A
Subjt:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS
        PNQAEDVVSTMLAKGFILGKDA+NKAKAFDER QLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQV EKTKSALAVAEQKA+SAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR
        NYYV TGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEKKESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

SwissProt top hits

e value

%identity

Alignment

P87216 Protein vip1

3.4e-06

27.05

Show/hide

Query:  VKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAE
        V V+NIS   +E+ I +FFSF G++  +  ++  E TQ A + ++      TA+LL  A +G   + IT  +         +S  D+       A  Q +
Subjt:  VKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAE

Query:  D----VVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVN------EKVREMDEMFQVREK---TKSALAVAEQKA-
             ++S +L++G+ L    L K+   D+   ++S          +  GI E   +G   VN      EK  E+D  F + +K   T S ++    KA 
Subjt:  D----VVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVN------EKVREMDEMFQVREK---TKSALAVAEQKA-

Query:  -TSAGTA
         T+AGT+
Subjt:  -TSAGTA

Q9LFD5 Binding partner of ACD11 1

3.0e-55

49.23

Show/hide

Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
        +R+VKV N+S   +E DIKEFFSFSGE+  +++Q    N   AYVT+K++QGA+TA+LL+GA I D SV I L  NY  PP A  +  + + +       
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY
        +AEDVVS+MLAKGFILGKDA+ KAKAFDE+   TS A+A VAS+D+K+G+++K+TAGT++VNEK++ +D+ FQV E+TKS  A AEQ  +SAG+A+M N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDE
        YVLTG +W + A   V +AA EV Q TK   EK E E+     + +  +   ++ +H  E
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDE

Arabidopsis top hits

e value

%identity

Alignment

AT1G67950.1 RNA-binding (RRM/RBD/RNP motifs) family protein

1.2e-70

55.72

Show/hide

Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
        ++TVK+SN+S + S++D+KEFFSFSG+I YVEM+ E++ +QVAYVT+KDSQGA+TA+LLTGA I DL V+IT   NY LPPEA++  LD   +  G +  
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY
        +AEDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QVRE TKSALA AE+ A SA TALM+N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPV
        YV +GA+WFSNA  AVTKA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPV

AT1G67950.2 RNA-binding (RRM/RBD/RNP motifs) family protein

1.2e-70

55.72

Show/hide

Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN
        ++TVK+SN+S + S++D+KEFFSFSG+I YVEM+ E++ +QVAYVT+KDSQGA+TA+LLTGA I DL V+IT   NY LPPEA++  LD   +  G +  
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY
        +AEDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QVRE TKSALA AE+ A SA TALM+N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPV
        YV +GA+WFSNA  AVTKA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPV

AT1G67950.3 RNA-binding (RRM/RBD/RNP motifs) family protein

1.3e-69

55.51

Show/hide

Query:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQ-TVTGIAP
        ++TVK+SN+S + S++D+KEFFSFSG+I YVEM+ E++ +QVAYVT+KDSQGA+TA+LLTGA I DL V+IT   NY LPPEA++  LD ++ +  G + 
Subjt:  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQ-TVTGIAP

Query:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN
         +AEDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QVRE TKSALA AE+ A SA TALM+N
Subjt:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSN

Query:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPV
         YV +GA+WFSNA  AVTKA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPV

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein

7.5e-70

56.02

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Query:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA
        M+M TVKVSN+S   ++RD+KEFFSFSG+ILY+E Q E+E T++AYVT+KD QGA+TA+LL+GA I D SV +++  +Y L PEA++S+  K    +  A
Subjt:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA

Query:  PN----QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGT
         +    +AEDVVS+MLAKGFILGKDA+ KAK+ DE+ QLTS ASA VAS D+K+G T+KI  GT VV EKVRE+D+ +QV EKTKSA+A AEQ  ++AG+
Subjt:  PN----QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGT

Query:  ALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDE
        A+M N YVLTGA W + A   V KAAEEV Q  K KV  AEEE K         ++  FA +HL E
Subjt:  ALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein

4.9e-69

53.7

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Query:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA
        MSM TVKVSN+S   +ERD+KEFFSFSG+I Y+E Q E++ +++AYVT+KD QGA+TA+LLTG+ I D SVT+T+  +Y LPP+A++SI   +++    +
Subjt:  MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIA

Query:  P--------NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKAT
        P         +AEDVVS M++KGF+LGKDA+ KAK+ DE+ QLTS ASA V S D+++G TEKI  GT VV+EKV+E+D+ FQV EKTKSA+A AEQ  +
Subjt:  P--------NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKAT

Query:  SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDE
        +AG+A+M N YVLTGA W + A   V+KAAEEV Q  K KV  AEEE++     E+  ++   A +HL E
Subjt:  SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDE

Sequences

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CDS sequence

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ATGTCGATGAGAACTGTCAAAGTCAGCAATATCTCAAAACTTACTTCTGAGAGAGATATCAAAGAATTCTTTTCATTCTCTGGGGAAATCCTTTACGTTGAAATGCAAAG
AGAAAGTGAGAACACTCAGGTTGCTTATGTTACATATAAGGATTCTCAAGGAGCTGATACTGCAATACTTTTGACAGGAGCTAAAATTGGTGATCTATCTGTAACAATTA
CTTTGGTTGAGAATTACCATCTTCCACCTGAAGCAATGTCGTCAATCCTGGATAAAAGGCAAACGGTTACTGGGATTGCTCCGAATCAGGCTGAAGACGTCGTAAGTACA
ATGCTTGCGAAGGGTTTCATCTTGGGGAAGGATGCTCTAAACAAAGCAAAAGCATTCGACGAACGACTCCAATTGACATCAAATGCTTCTGCAACCGTAGCTTCCATTGA
CCGCAAGATGGGAATAACTGAGAAAATAACCGCAGGCACAGCAGTGGTGAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAAGTTAGGGAGAAGACGAAATCCGCGC
TTGCCGTTGCAGAGCAAAAGGCAACAAGCGCGGGAACAGCGCTGATGAGCAATTATTATGTGTTAACTGGAGCAGCATGGTTTTCAAATGCTGTAACTGCAGTTACAAAA
GCTGCTGAGGAAGTGACCCAAATGACAAAGGTAAAAGTCGAGAAAGCCGAGGAGGAGAAAAAGGAGAGTATATATCGGGAAAGAACGGGGATTATTAGTAACTTCGCCGA
GCTCCATCTGGACGAGCCTTTACCTGGGGAGCCTGCTATTGTTCCAGTTAATTCAGCAGATAGATAG

mRNA sequence

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CATCTTTGTGTTCTTTCTTTTCATTTTCAGAAATGTCGATGAGAACTGTCAAAGTCAGCAATATCTCAAAACTTACTTCTGAGAGAGATATCAAAGAATTCTTTTCATTC
TCTGGGGAAATCCTTTACGTTGAAATGCAAAGAGAAAGTGAGAACACTCAGGTTGCTTATGTTACATATAAGGATTCTCAAGGAGCTGATACTGCAATACTTTTGACAGG
AGCTAAAATTGGTGATCTATCTGTAACAATTACTTTGGTTGAGAATTACCATCTTCCACCTGAAGCAATGTCGTCAATCCTGGATAAAAGGCAAACGGTTACTGGGATTG
CTCCGAATCAGGCTGAAGACGTCGTAAGTACAATGCTTGCGAAGGGTTTCATCTTGGGGAAGGATGCTCTAAACAAAGCAAAAGCATTCGACGAACGACTCCAATTGACA
TCAAATGCTTCTGCAACCGTAGCTTCCATTGACCGCAAGATGGGAATAACTGAGAAAATAACCGCAGGCACAGCAGTGGTGAATGAAAAGGTCAGGGAGATGGATGAAAT
GTTCCAAGTTAGGGAGAAGACGAAATCCGCGCTTGCCGTTGCAGAGCAAAAGGCAACAAGCGCGGGAACAGCGCTGATGAGCAATTATTATGTGTTAACTGGAGCAGCAT
GGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCTGAGGAAGTGACCCAAATGACAAAGGTAAAAGTCGAGAAAGCCGAGGAGGAGAAAAAGGAGAGTATATATCGG
GAAAGAACGGGGATTATTAGTAACTTCGCCGAGCTCCATCTGGACGAGCCTTTACCTGGGGAGCCTGCTATTGTTCCAGTTAATTCAGCAGATAGATAGAGAGACAGTAA
GTTGTGAATCATAATCTCATATGCATGAAAAACCTTATACTTGTGAATTACATTGTGCTTCTTCTTCTTCTTCTTCTTCTTTTTCTCCACTTTGTTGTATGATATTATAC
ATTTACATTTTAGAGGTGCTCCAATTACAGAGTTTACTTCTTTCTACTTGTGGATGTTGAAATGTTATGACATTCTTTGGGTAGAAAAATCCCT

Protein sequence

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MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVST
MLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKTKSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTK
AAEEVTQMTKVKVEKAEEEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR

CSPI05G00650 (gene) of Cucumber (PI 183967) v1 genome