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CSPI05G00750 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G00750
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionFlagellar basal-body rod protein FlgB
Genome locationChr5:982617..983018
RNA-Seq ExpressionCSPI05G00750
SyntenyCSPI05G00750
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062631.1 hypothetical protein E6C27_scaffold79G001420 [Cucumis melo var. makuwa]3.1e-0739.81Show/hide
Query:  RKNTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANIG---KMLLDKRNRRGRAKEGVEEKQTEMEEIGEEMEEIFEEQC
        +++T+VV   GPVSEQAQ  S+     + +S EVF T+GWNPF F+  E+ +T+ NI     +L+++ N+R   KE VE+K+ E EE   + +   EE+ 
Subjt:  RKNTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANIG---KMLLDKRNRRGRAKEGVEEKQTEMEEIGEEMEEIFEEQC

Query:  EKE
        ++E
Subjt:  EKE

KGN49618.1 hypothetical protein Csa_018381 [Cucumis sativus]4.4e-6293.98Show/hide
Query:  MAENNESEHFEKKEVRKNTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANIGKMLLDKRNRRGRAKEGVEEKQTEMEEI
        MA+NNESEHFEKK+VRKNTKVVCFDGPVSEQAQHDSTPQT+TMRNSSEV ETEGWNPFKFQWMEISITD NIGKMLLDKRNRRGRAKEGVEEKQ EMEEI
Subjt:  MAENNESEHFEKKEVRKNTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANIGKMLLDKRNRRGRAKEGVEEKQTEMEEI

Query:  GEEMEEIFEEQCEKEPSSPIGKTEFGRLAKEAQ
        GEEMEEI EEQCEKEPSSPI KTEFGRLAKEAQ
Subjt:  GEEMEEIFEEQCEKEPSSPIGKTEFGRLAKEAQ

TYK11051.1 hypothetical protein E5676_scaffold73G00340 [Cucumis melo var. makuwa]1.0e-0544.58Show/hide
Query:  MAENNESEHFEKKEVRK-------NTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANIGKML
        M E   SE  EKKE          + K+V  DGPVSEQ Q   T     + +SS VF TEGWNPF F+   I + D NI  ML
Subjt:  MAENNESEHFEKKEVRK-------NTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANIGKML

TYK25880.1 flagellar basal-body rod protein FlgB [Cucumis melo var. makuwa]8.5e-0539.24Show/hide
Query:  MAENNESEHFEKKEV-------RKNTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANI
        M  N   +  EKK+         ++ K++CFDG + +QAQ  S+   +T+  SSEVF T+GWNPF     E+ I D NI
Subjt:  MAENNESEHFEKKEV-------RKNTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANI

TrEMBL top hitse value%identityAlignment
A0A0A0KJ97 Uncharacterized protein2.1e-6293.98Show/hide
Query:  MAENNESEHFEKKEVRKNTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANIGKMLLDKRNRRGRAKEGVEEKQTEMEEI
        MA+NNESEHFEKK+VRKNTKVVCFDGPVSEQAQHDSTPQT+TMRNSSEV ETEGWNPFKFQWMEISITD NIGKMLLDKRNRRGRAKEGVEEKQ EMEEI
Subjt:  MAENNESEHFEKKEVRKNTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANIGKMLLDKRNRRGRAKEGVEEKQTEMEEI

Query:  GEEMEEIFEEQCEKEPSSPIGKTEFGRLAKEAQ
        GEEMEEI EEQCEKEPSSPI KTEFGRLAKEAQ
Subjt:  GEEMEEIFEEQCEKEPSSPIGKTEFGRLAKEAQ

A0A5A7VAE2 Uncharacterized protein1.5e-0739.81Show/hide
Query:  RKNTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANIG---KMLLDKRNRRGRAKEGVEEKQTEMEEIGEEMEEIFEEQC
        +++T+VV   GPVSEQAQ  S+     + +S EVF T+GWNPF F+  E+ +T+ NI     +L+++ N+R   KE VE+K+ E EE   + +   EE+ 
Subjt:  RKNTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANIG---KMLLDKRNRRGRAKEGVEEKQTEMEEIGEEMEEIFEEQC

Query:  EKE
        ++E
Subjt:  EKE

A0A5D3CGX2 Uncharacterized protein4.9e-0644.58Show/hide
Query:  MAENNESEHFEKKEVRK-------NTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANIGKML
        M E   SE  EKKE          + K+V  DGPVSEQ Q   T     + +SS VF TEGWNPF F+   I + D NI  ML
Subjt:  MAENNESEHFEKKEVRK-------NTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANIGKML

A0A5D3DRG2 Flagellar basal-body rod protein FlgB4.1e-0539.24Show/hide
Query:  MAENNESEHFEKKEV-------RKNTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANI
        M  N   +  EKK+         ++ K++CFDG + +QAQ  S+   +T+  SSEVF T+GWNPF     E+ I D NI
Subjt:  MAENNESEHFEKKEV-------RKNTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAAAATAATGAAAGTGAGCATTTTGAGAAGAAAGAGGTGAGAAAGAATACTAAAGTAGTATGCTTTGATGGTCCTGTGTCGGAACAAGCACAACATGATTCCAC
ACCTCAGACTGACACAATGCGCAATTCGAGTGAAGTTTTCGAGACAGAGGGATGGAATCCTTTCAAATTCCAATGGATGGAGATATCTATAACGGATGCAAATATTGGAA
AAATGCTTCTTGACAAAAGAAATAGAAGAGGAAGAGCAAAGGAAGGAGTTGAGGAGAAACAAACAGAGATGGAAGAAATTGGGGAGGAAATGGAAGAAATATTTGAAGAA
CAATGTGAAAAAGAACCTTCCTCGCCAATAGGTAAAACTGAATTCGGGAGGTTGGCGAAAGAGGCCCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAAAATAATGAAAGTGAGCATTTTGAGAAGAAAGAGGTGAGAAAGAATACTAAAGTAGTATGCTTTGATGGTCCTGTGTCGGAACAAGCACAACATGATTCCAC
ACCTCAGACTGACACAATGCGCAATTCGAGTGAAGTTTTCGAGACAGAGGGATGGAATCCTTTCAAATTCCAATGGATGGAGATATCTATAACGGATGCAAATATTGGAA
AAATGCTTCTTGACAAAAGAAATAGAAGAGGAAGAGCAAAGGAAGGAGTTGAGGAGAAACAAACAGAGATGGAAGAAATTGGGGAGGAAATGGAAGAAATATTTGAAGAA
CAATGTGAAAAAGAACCTTCCTCGCCAATAGGTAAAACTGAATTCGGGAGGTTGGCGAAAGAGGCCCAATAA
Protein sequenceShow/hide protein sequence
MAENNESEHFEKKEVRKNTKVVCFDGPVSEQAQHDSTPQTDTMRNSSEVFETEGWNPFKFQWMEISITDANIGKMLLDKRNRRGRAKEGVEEKQTEMEEIGEEMEEIFEE
QCEKEPSSPIGKTEFGRLAKEAQ