CuGenDBv2

Gene ID	CSPI05G00840
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Chlororespiratory reduction 3, putative isoform 1
Genome location	Chr5:1110484..1112565
RNA-Seq Expression	CSPI05G00840
Synteny	CSPI05G00840
Gene Ontology terms	GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR038931 - Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600832.1 putative NAD(P)H dehydrogenase subunit CRR3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

2.4e-65

82.1

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Query:  MASLFSISFTKNVAFASLNPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEAPL
        MA    IS TKNVA ASLNP   SHSPP KTN AA TIPI NPRLRR+L  P RPS+IEIERAIG GRFRDADPR+LEED+KAAFDMFLMSFTGKYE  L
Subjt:  MASLFSISFTKNVAFASLNPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEAPL

Query:  MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL
        MKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPF+TPFL++LL
Subjt:  MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL

XP_004142275.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucumis sativus]

1.7e-84

98.79

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Query:  MASLFSISFTKNVAFASLNPDP--HSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA
        MASLFSISFTKNVAFASLNPDP  HSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA
Subjt:  MASLFSISFTKNVAFASLNPDP--HSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
        PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM

XP_008464703.1 PREDICTED: probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic isoform X1 [Cucumis melo]

1.2e-74

89.22

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Query:  MASLFSISFTKNVAFASLNPD----PHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKY
        MASLFSIS TKNVA ASLNP+     HSHSPPLKTN AA TIPI  PRLR KLLNP RPS+IEIERAIGGGRFRDADPR+LEEDKKAAFDMFLMSFTGKY
Subjt:  MASLFSISFTKNVAFASLNPD----PHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKY

Query:  EAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
        E PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPF+TPFLNELLM
Subjt:  EAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM

XP_023511915.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucurbita pepo subsp. pepo]

2.1e-66

82.72

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Query:  MASLFSISFTKNVAFASLNPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEAPL
        MA  F IS TKNVA ASLNP   SHSPP KTN AA TIPI NPRLRR+L  P RPS+IEIERAIG GRFRDADPR+LEED+KAAFDMFLMSFTGKYE  L
Subjt:  MASLFSISFTKNVAFASLNPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEAPL

Query:  MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL
        MKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPF+TPFL++LL
Subjt:  MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL

XP_038893324.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Benincasa hispida]

5.2e-73

87.12

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Query:  MASLFSISFTKNVAFASLNPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEAPL
        MAS FSIS TKNV  ASLNP   SHSPP KTN AA TIPINNPRLRR+L  P RPS+IEIERAIGGGRFRDADPR+LEED+KAAFDMFLMSFTGKYE P+
Subjt:  MASLFSISFTKNVAFASLNPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEAPL

Query:  MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
        MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASG+IKLPF+TPFLNELLM
Subjt:  MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJA3 Uncharacterized protein

8.4e-85

98.79

Show/hide

Query:  MASLFSISFTKNVAFASLNPDP--HSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA
        MASLFSISFTKNVAFASLNPDP  HSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA
Subjt:  MASLFSISFTKNVAFASLNPDP--HSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
        PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM

A0A1S3CM65 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic isoform X1

6.0e-75

89.22

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Query:  MASLFSISFTKNVAFASLNPD----PHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKY
        MASLFSIS TKNVA ASLNP+     HSHSPPLKTN AA TIPI  PRLR KLLNP RPS+IEIERAIGGGRFRDADPR+LEEDKKAAFDMFLMSFTGKY
Subjt:  MASLFSISFTKNVAFASLNPD----PHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKY

Query:  EAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
        E PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPF+TPFLNELLM
Subjt:  EAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM

A0A6J1DQ49 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

8.5e-61

77.91

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Query:  MASLFSISFTKNVAFASLNPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEAPL
        +AS   IS TKNVA ASLN    SHSP  K N  A TIPI N    R+L  P RPS+IEIERAIG GRFRDADPR+LEED+K  FDMFL+SFT KYE PL
Subjt:  MASLFSISFTKNVAFASLNPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEAPL

Query:  MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
        MKKLRETGEWVTNQTETKFQASGKWFLLFTFQW+LPIWALSLLVASGVIKLPFSTPFL+ELLM
Subjt:  MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM

A0A6J1FSN9 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

1.1e-65

82.1

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Query:  MASLFSISFTKNVAFASLNPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEAPL
        MA    IS TKNVA ASLNP   SHSPP KTN AA TIPI NPRLRR+L  P RPS+IEIERAIG GRFRDADPR+LEED+KAAFDMFLMSFTGKYE  L
Subjt:  MASLFSISFTKNVAFASLNPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEAPL

Query:  MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL
        MKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPF+TPFL++LL
Subjt:  MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL

A0A6J1J6W0 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

3.3e-65

80.61

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Query:  MASLFSISFTKNVAFASLNPDPHSHSPPLKTNLAAHTIPINNPRLR---RKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYE
        MA  F IS TKNVA ASLNP   SHSPP KTN AA TIP+NNP+LR   R+L  P RPS+IEIERAIG GRFRDADPR+LEED+KAAFDMFLMSFTGKYE
Subjt:  MASLFSISFTKNVAFASLNPDPHSHSPPLKTNLAAHTIPINNPRLR---RKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYE

Query:  APLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL
          LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPF+TPFL++LL
Subjt:  APLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELL

SwissProt top hits

e value

%identity

Alignment

Q9ZVE7 Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

1.9e-25

41.48

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Query:  MASLFSISFTKNVAFASL---NPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNP----------PRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDM
        +++++SI+       ASL   +P P   S P K  L + T P   P   R++              +PS+ +IERA G G +RD+   E E D    FD 
Subjt:  MASLFSISFTKNVAFASL---NPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNP----------PRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDM

Query:  FLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
         L+    K+E+ + KKLRE GE    +TE K ++SGK  L+FT QW+LPIW +SLLVA GVIKLPFS PFL++L+M
Subjt:  FLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM

Arabidopsis top hits

e value

%identity

Alignment

AT2G01590.1 chlororespiratory reduction 3

1.3e-26

41.48

Show/hide

Query:  MASLFSISFTKNVAFASL---NPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNP----------PRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDM
        +++++SI+       ASL   +P P   S P K  L + T P   P   R++              +PS+ +IERA G G +RD+   E E D    FD 
Subjt:  MASLFSISFTKNVAFASL---NPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNP----------PRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDM

Query:  FLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM
         L+    K+E+ + KKLRE GE    +TE K ++SGK  L+FT QW+LPIW +SLLVA GVIKLPFS PFL++L+M
Subjt:  FLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM

Sequences

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CDS sequence

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ATGGCTTCTCTCTTCTCCATTTCGTTTACCAAAAATGTGGCTTTCGCTTCACTCAATCCCGACCCCCACTCTCACTCTCCTCCTCTCAAAACCAATCTCGCCGCCCACAC
CATTCCGATCAACAATCCCCGCCTACGGCGCAAGCTTCTAAACCCTCCTCGCCCCTCCCTCATTGAAATCGAACGTGCTATTGGTGGTGGAAGGTTCAGAGACGCCGACC
CTAGGGAATTGGAAGAAGATAAGAAGGCTGCATTTGACATGTTTTTGATGAGTTTTACGGGGAAATATGAAGCGCCACTCATGAAAAAGCTTCGTGAGACAGGGGAATGG
GTAACTAATCAAACTGAAACCAAATTTCAAGCTTCGGGAAAATGGTTTCTGTTGTTTACATTTCAATGGGTTCTTCCAATTTGGGCATTGTCACTTCTCGTGGCTTCTGG
GGTCATTAAGCTACCATTCAGCACTCCATTTCTTAATGAACTTCTCATGTAA

mRNA sequence

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GAAAGAAGAGAGAAGAGAGAAGAGAGAAGATCGAAAAAGAAAGAGGAAAAACTAAAATACATTTTTAGTAAACAAAGCGGGTTTGGTTAGTTTTTGAGCATCAAACCTCC
AATCCGTTATTGCTGGAAAGTTCTCCTGAACTTTTATTTATAAGAAAATATCTTTAATTTATCAAACTCTGCTTTCTTATCTCTGCCTCTCCAACCCCAATGGCTTCTCT
CTTCTCCATTTCGTTTACCAAAAATGTGGCTTTCGCTTCACTCAATCCCGACCCCCACTCTCACTCTCCTCCTCTCAAAACCAATCTCGCCGCCCACACCATTCCGATCA
ACAATCCCCGCCTACGGCGCAAGCTTCTAAACCCTCCTCGCCCCTCCCTCATTGAAATCGAACGTGCTATTGGTGGTGGAAGGTTCAGAGACGCCGACCCTAGGGAATTG
GAAGAAGATAAGAAGGCTGCATTTGACATGTTTTTGATGAGTTTTACGGGGAAATATGAAGCGCCACTCATGAAAAAGCTTCGTGAGACAGGGGAATGGGTAACTAATCA
AACTGAAACCAAATTTCAAGCTTCGGGAAAATGGTTTCTGTTGTTTACATTTCAATGGGTTCTTCCAATTTGGGCATTGTCACTTCTCGTGGCTTCTGGGGTCATTAAGC
TACCATTCAGCACTCCATTTCTTAATGAACTTCTCATGTAATAAGGTAAGATTAAATTACCCAATTTAATCTCTAAAATTTCACTTTAATTTATTGGATATAGAAGGAAG
GTGTTAAAGTATATATCTACATTGAAAATTTAGAAGTTGACATATAGTTTATTTATTCTATCATCCAAAGGGCTTGG

Protein sequence

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MASLFSISFTKNVAFASLNPDPHSHSPPLKTNLAAHTIPINNPRLRRKLLNPPRPSLIEIERAIGGGRFRDADPRELEEDKKAAFDMFLMSFTGKYEAPLMKKLRETGEW
VTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFSTPFLNELLM

CSPI05G00840 (gene) of Cucumber (PI 183967) v1 genome