| GenBank top hits | e value | %identity | Alignment |
|---|
| ABF94034.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] | 1.9e-108 | 46.44 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGKEITEFQVIDQFYSDEFENL
GRKP L HL+VFGC A+ KNT PHLKKLDDRS+P VY GV+E KAHRL+DP RG++ +S DV+F+EN+ W W G+E T+F + + + E L
Subjt: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGKEITEFQVIDQFYSDEFENL
Query: EDAETRVENVLPH----------------ATEIPA-----------IGETSPSPPSMNTTILL------------------RSLSDIYANTEEV-VGGDE
T V P+ A E+P+ G +P PS N+ ++ RSL+D+ V + DE
Subjt: EDAETRVENVLPH----------------ATEIPA-----------IGETSPSPPSMNTTILL------------------RSLSDIYANTEEV-VGGDE
Query: QENEVMMVVSEEPTCFQEAVTEGRC------------------LTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARL
+ E ++ SEEP+ ++EA + L LP GH+ IGLKWV+KLKK+ GE++KHK RLVAKGYVQ+QG++FEEVFAPVARL
Subjt: QENEVMMVVSEEPTCFQEAVTEGRC------------------LTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARL
Query: DTIRVILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEEC
DT+RV+LA+AA++ W EEVYV QPEGF ++H V +L KALYGLRQAPRAWNIRLDRSL++LGF +C QEQAVY R +
Subjt: DTIRVILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEEC
Query: VLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
++VGVYVDDLIVTG + ++ FK+QMM +FEMSDLG L+YYLGIEV+Q + LKQ YAK++LSQFGM +CN+ +
Subjt: VLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
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| EEC84282.1 hypothetical protein OsI_30754 [Oryza sativa Indica Group] | 8.5e-109 | 48.83 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGKEITEFQVIDQ---------
GRKP L HLRVFGC+A+ K TTP+ KKLDDRS+P VY GV+E KAHRL+DP G++ +S DVIF+EN+ W W+ VV+ + TEF V +
Subjt: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGKEITEFQVIDQ---------
Query: --FYSDEFENLEDA--ETRVENVLPHATEIPAIGETSPS--PPSMNTT---------------------ILLRSLSDIYANTEEV-VGGDEQENEVMMVV
+ + A ++ + + + + +P ++SPS PPS T + RSL DI V + DE + + ++
Subjt: --FYSDEFENLEDA--ETRVENVLPHATEIPAIGETSPS--PPSMNTT---------------------ILLRSLSDIYANTEEV-VGGDEQENEVMMVV
Query: SEEPTCFQEAVTEGR------------------CLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILAL
EEP+ ++EA + LT LP GHK IGLKWV+KLKK+ GEV+KHK RLVAKGYVQRQG++FEEVFAPVARLDT+RVILA+
Subjt: SEEPTCFQEAVTEGR------------------CLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILAL
Query: AANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDD
AA++ W EEVYV QPEGF E+H V RLSKALYGLRQAPRAWN RLD+ LK+LGF +C QEQAVY R + + V+VGVYVDD
Subjt: AANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDD
Query: LIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
LIVTG + +++ FKQQMM +FEMSDLG LSYYLGIEV Q + I +KQ YAK+ILSQFGM CN T+
Subjt: LIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
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| KAB8107251.1 hypothetical protein EE612_041900 [Oryza sativa] | 1.1e-108 | 49.04 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGKEITEFQVIDQ---------
GRKP L HLRVFGC+A+ K TTP+ KKLDDRS+P VY GV+E KAHRL+DP G++ +S DVIF+EN+ W W+ VV+ + TEF V +
Subjt: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGKEITEFQVIDQ---------
Query: --FYSDEFENLEDAETRVENVLP--HATEIPAIGETSPS--PPSMNTT---------------------ILLRSLSDIYANTEEV-VGGDEQENEVMMVV
+ + A + P ++ +P ++SPS PPS T + RSL DI V + DE + + ++
Subjt: --FYSDEFENLEDAETRVENVLP--HATEIPAIGETSPS--PPSMNTT---------------------ILLRSLSDIYANTEEV-VGGDEQENEVMMVV
Query: SEEPTCFQEAVTEGR------------------CLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILAL
EEP+ ++EA + LT LP GHK IGLKWV+KLKK+ GEV+KHK RLVAKGYVQRQG++FEEVFAPVARLDT+RVILA+
Subjt: SEEPTCFQEAVTEGR------------------CLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILAL
Query: AANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDD
AA++ W EEVYV QPEGF E+H V RLSKALYGLRQAPRAWN RLD+ LK+LGF +C QEQAVY R + + V+VGVYVDD
Subjt: AANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDD
Query: LIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
LIVTG + ++ FKQQMM +FEMSDLG LSYYLGIEV Q + I +KQ YAK+ILSQFGM CN T+
Subjt: LIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
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| KAF5794275.1 putative RNA-directed DNA polymerase [Helianthus annuus] | 5.5e-100 | 43.37 | Show/hide |
Query: RKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQIS--SDVIFQENLEWAWNEVVSDGKEITEFQVIDQFYSDEFEN
++P L ++VFGC+ +V H+ KLDDRS PMVY G++ C HR YDP + +L ++ DV+F+E ++W W + K ++ Q I N
Subjt: RKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQIS--SDVIFQENLEWAWNEVVSDGKEITEFQVIDQFYSDEFEN
Query: LEDAETRVENVLPH---ATEIPAIGETSP------------------------------SPPSMNTTIL-----------LRSLSDIYANTEEVVGGDEQ
LED+ T N P E+ G+ SP P M++ R+++D+Y NTEE+V
Subjt: LEDAETRVENVLPH---ATEIPAIGETSP------------------------------SPPSMNTTIL-----------LRSLSDIYANTEEVVGGDEQ
Query: ENEVMMVVSEEPTCFQ----------------EAVTEGR--CLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLD
E +V+M SEEPTC++ EA+ CLTELP G K+IGLKW+FK+KKDP G++ K+K RLVAKGYVQ++GI+ EEVFAPVARL+
Subjt: ENEVMMVVSEEPTCFQ----------------EAVTEGR--CLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLD
Query: TIRVILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECV
T+R+ILALA + W EEVYV QP GFEV ++ KVY+L++ALYGL+QAPRAWN RLD++LK +GF KC QE A+Y ++ + +
Subjt: TIRVILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECV
Query: LVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNA
+VGVYVDDL+VTGS+ ++V FK QMM ++EMSDLG LSYYLGIEVEQ +G + + Q +YAKRI+ GM DCNA
Subjt: LVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNA
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| XP_042756658.1 uncharacterized protein LOC111883520 [Lactuca sativa] | 1.9e-100 | 44.47 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGK------EITEFQVIDQFYS
GRKPH+ HLRVFGCVA++K HLKKL+DRS +VY G ++ KAHRL DP G + +S DVIF+EN W W + + I F ++ YS
Subjt: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGK------EITEFQVIDQFYS
Query: DEFENLEDA-------------------------ETRVENVLPHATEIPAIGET---SPSPPSMNTTIL-------------------LRSLSDIYANTE
DE + + D T+ N P+ + IP T +P PPS + R LSD+Y NT
Subjt: DEFENLEDA-------------------------ETRVENVLPHATEIPAIGET---SPSPPSMNTTIL-------------------LRSLSDIYANTE
Query: EVVGGDEQENEVMMVVS--EEPTCFQEAVTEGRC------------------LTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFE
E+ E E +M+VS EEP + EA + L +LP G + IGLKWVFK+K+DP G ++KHK R+VAKGY+Q+QGI++E
Subjt: EVVGGDEQENEVMMVVS--EEPTCFQEAVTEGRC------------------LTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFE
Query: EVFAPVARLDTIRVILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAV
EVFAPVAR++T+RVILALA + W EEVYV+QPEGF NE KVY+LSKALYGL+QAPRAWN LD+ LK LGFR+C QE +V
Subjt: EVFAPVARLDTIRVILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAV
Query: YIRREEEECVLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATNT
Y R + +++G+YVDDL+VTGS+ E + +FK++M A+FEMSDLG LSYYLGIEV QQ I LKQ YAK IL + M DCN T T
Subjt: YIRREEEECVLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATNT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0P0XB91 Os08g0125300 protein | 5.4e-109 | 49.04 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGKEITEFQVIDQ---------
GRKP L HLRVFGC+A+ K TTP+ KKLDDRS+P VY GV+E KAHRL+DP G++ +S DVIF+EN+ W W+ VV+ + TEF V +
Subjt: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGKEITEFQVIDQ---------
Query: --FYSDEFENLEDAETRVENVLP--HATEIPAIGETSPS--PPSMNTT---------------------ILLRSLSDIYANTEEV-VGGDEQENEVMMVV
+ + A + P ++ +P ++SPS PPS T + RSL DI V + DE + + ++
Subjt: --FYSDEFENLEDAETRVENVLP--HATEIPAIGETSPS--PPSMNTT---------------------ILLRSLSDIYANTEEV-VGGDEQENEVMMVV
Query: SEEPTCFQEAVTEGR------------------CLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILAL
EEP+ ++EA + LT LP GHK IGLKWV+KLKK+ GEV+KHK RLVAKGYVQRQG++FEEVFAPVARLDT+RVILA+
Subjt: SEEPTCFQEAVTEGR------------------CLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILAL
Query: AANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDD
AA++ W EEVYV QPEGF E+H V RLSKALYGLRQAPRAWN RLD+ LK+LGF +C QEQAVY R + + V+VGVYVDD
Subjt: AANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDD
Query: LIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
LIVTG + ++ FKQQMM +FEMSDLG LSYYLGIEV Q + I +KQ YAK+ILSQFGM CN T+
Subjt: LIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
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| A0A251UCI2 Putative ribonuclease H-like domain, Reverse transcriptase, RNA-dependent DNA polymerase | 1.1e-98 | 44.73 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWN---EVVSDGK-EITEFQVIDQFYSDE
GRKP+L HL+VFGC AY K KKLDDRS+PMVY G++E KA+RLYDP + K+ +S DV F E W W+ E V G E T F + + E
Subjt: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWN---EVVSDGK-EITEFQVIDQFYSDE
Query: FE----------------------NLEDAETRVENVLPHATEI---------------PAIGETSPSPPSMNTTILLRSLSDIYANTEEVVGGDEQENEV
E ++ E + V P A P+ E++ S NT + LRSL ++Y TEE+ + +
Subjt: FE----------------------NLEDAETRVENVLPHATEI---------------PAIGETSPSPPSMNTTILLRSLSDIYANTEEVVGGDEQENEV
Query: MMVVSEEPTCFQEAVTEGR------------------CLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRV
+++ EEP ++EA ++ + LTELP HK IGLKWVFK KKD NG +V+HK RLVAKGYVQ+ GI+F+EVFAP+AR++T+R+
Subjt: MMVVSEEPTCFQEAVTEGR------------------CLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRV
Query: ILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGV
+LALAA Q W EEVYV+QPEGF P ++ KVYRLSKALYGLRQAPRAWN +LD++LK L F+KC E A+Y R E ++VGV
Subjt: ILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGV
Query: YVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATNT
YVDDLIVTG+S ++++ FK QM KF+MSDLG L+YYLGIEV Q G I +KQ Y +IL M+ CN T T
Subjt: YVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATNT
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| B8BDZ6 Uncharacterized protein | 4.1e-109 | 48.83 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGKEITEFQVIDQ---------
GRKP L HLRVFGC+A+ K TTP+ KKLDDRS+P VY GV+E KAHRL+DP G++ +S DVIF+EN+ W W+ VV+ + TEF V +
Subjt: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGKEITEFQVIDQ---------
Query: --FYSDEFENLEDA--ETRVENVLPHATEIPAIGETSPS--PPSMNTT---------------------ILLRSLSDIYANTEEV-VGGDEQENEVMMVV
+ + A ++ + + + + +P ++SPS PPS T + RSL DI V + DE + + ++
Subjt: --FYSDEFENLEDA--ETRVENVLPHATEIPAIGETSPS--PPSMNTT---------------------ILLRSLSDIYANTEEV-VGGDEQENEVMMVV
Query: SEEPTCFQEAVTEGR------------------CLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILAL
EEP+ ++EA + LT LP GHK IGLKWV+KLKK+ GEV+KHK RLVAKGYVQRQG++FEEVFAPVARLDT+RVILA+
Subjt: SEEPTCFQEAVTEGR------------------CLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILAL
Query: AANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDD
AA++ W EEVYV QPEGF E+H V RLSKALYGLRQAPRAWN RLD+ LK+LGF +C QEQAVY R + + V+VGVYVDD
Subjt: AANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDD
Query: LIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
LIVTG + +++ FKQQMM +FEMSDLG LSYYLGIEV Q + I +KQ YAK+ILSQFGM CN T+
Subjt: LIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
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| Q0J8A6 Os08g0125300 protein | 5.4e-109 | 49.04 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGKEITEFQVIDQ---------
GRKP L HLRVFGC+A+ K TTP+ KKLDDRS+P VY GV+E KAHRL+DP G++ +S DVIF+EN+ W W+ VV+ + TEF V +
Subjt: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGKEITEFQVIDQ---------
Query: --FYSDEFENLEDAETRVENVLP--HATEIPAIGETSPS--PPSMNTT---------------------ILLRSLSDIYANTEEV-VGGDEQENEVMMVV
+ + A + P ++ +P ++SPS PPS T + RSL DI V + DE + + ++
Subjt: --FYSDEFENLEDAETRVENVLP--HATEIPAIGETSPS--PPSMNTT---------------------ILLRSLSDIYANTEEV-VGGDEQENEVMMVV
Query: SEEPTCFQEAVTEGR------------------CLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILAL
EEP+ ++EA + LT LP GHK IGLKWV+KLKK+ GEV+KHK RLVAKGYVQRQG++FEEVFAPVARLDT+RVILA+
Subjt: SEEPTCFQEAVTEGR------------------CLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILAL
Query: AANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDD
AA++ W EEVYV QPEGF E+H V RLSKALYGLRQAPRAWN RLD+ LK+LGF +C QEQAVY R + + V+VGVYVDD
Subjt: AANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDD
Query: LIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
LIVTG + ++ FKQQMM +FEMSDLG LSYYLGIEV Q + I +KQ YAK+ILSQFGM CN T+
Subjt: LIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
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| Q10RM4 Retrotransposon protein, putative, unclassified | 9.2e-109 | 46.44 | Show/hide |
Query: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGKEITEFQVIDQFYSDEFENL
GRKP L HL+VFGC A+ KNT PHLKKLDDRS+P VY GV+E KAHRL+DP RG++ +S DV+F+EN+ W W G+E T+F + + + E L
Subjt: GRKPHLAHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQENLEWAWNEVVSDGKEITEFQVIDQFYSDEFENL
Query: EDAETRVENVLPH----------------ATEIPA-----------IGETSPSPPSMNTTILL------------------RSLSDIYANTEEV-VGGDE
T V P+ A E+P+ G +P PS N+ ++ RSL+D+ V + DE
Subjt: EDAETRVENVLPH----------------ATEIPA-----------IGETSPSPPSMNTTILL------------------RSLSDIYANTEEV-VGGDE
Query: QENEVMMVVSEEPTCFQEAVTEGRC------------------LTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARL
+ E ++ SEEP+ ++EA + L LP GH+ IGLKWV+KLKK+ GE++KHK RLVAKGYVQ+QG++FEEVFAPVARL
Subjt: QENEVMMVVSEEPTCFQEAVTEGRC------------------LTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARL
Query: DTIRVILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEEC
DT+RV+LA+AA++ W EEVYV QPEGF ++H V +L KALYGLRQAPRAWNIRLDRSL++LGF +C QEQAVY R +
Subjt: DTIRVILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEEC
Query: VLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
++VGVYVDDLIVTG + ++ FK+QMM +FEMSDLG L+YYLGIEV+Q + LKQ YAK++LSQFGM +CN+ +
Subjt: VLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.8e-38 | 24.1 | Show/hide |
Query: RKPHLAHLRVFGCVAYVKNTTPHLK----KLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQE------------------------------
+KP+L HLRVFG YV H+K K DD+S ++ G + +L+D K ++ DV+ E
Subjt: RKPHLAHLRVFGCVAYVKNTTPHLK----KLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQE------------------------------
Query: NLEWAWNEVVSDGKEITEFQVIDQFYSDEFENL-EDAETRVENVLP---------------------------------HATEIPAIGETSPS-------
+ + E ++ KE Q + E +N D+ ++ P H E G + S
Subjt: NLEWAWNEVVSDGKEITEFQVIDQFYSDEFENL-EDAETRVENVLP---------------------------------HATEIPAIGETSPS-------
Query: --------PPSMNTTILLRSLSDIYANTEEVVGGDEQENEVMMVVSEEPTCFQEA----------------------------VTEGRCLTELPLGHKLI
P+ N I + + T+ + +E++N + VV T F + + +T+ P ++
Subjt: --------PPSMNTTILLRSLSDIYANTEEVVGGDEQENEVMMVVSEEPTCFQEA----------------------------VTEGRCLTELPLGHKLI
Query: GLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKVYR
+WVF +K + G +++K RLVA+G+ Q+ I++EE FAPVAR+ + R IL+L + EE+Y+ P+G ++ V +
Subjt: GLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKVYR
Query: LSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYI--RREEEECVLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKG
L+KA+YGL+QA R W +++LK+ F ++ +YI + E + V +YVDD+++ ++N FK+ +M KF M+DL + +++GI +E Q+
Subjt: LSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYI--RREEEECVLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKG
Query: RILLKQPTYAKRILSQFGMADCNATNT
+I L Q Y K+ILS+F M +CNA +T
Subjt: RILLKQPTYAKRILSQFGMADCNATNT
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-54 | 32.36 | Show/hide |
Query: AHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQEN--------LEWAWNEVVSD------------GKEITEF
+HL+VFGC A+ KLDD+S P ++ G + +RL+DP + K+ S DV+F+E+ E N ++ + E T
Subjt: AHLRVFGCVAYVKNTTPHLKKLDDRSSPMVYFGVKERCKAHRLYDPGRGKLQISSDVIFQEN--------LEWAWNEVVSD------------GKEITEF
Query: QVIDQFYSDEFENLEDAETRVENVLPHATEIPAIGETSPSPPSMNTTILLRSLSDIYANTEEVVGGDEQE-------------NEVMMVVSEEPTCFQEA
+V +Q E +E E E V E P GE P + + R S Y +TE V+ D++E N++M + EE Q+
Subjt: QVIDQFYSDEFENLEDAETRVENVLPHATEIPAIGETSPSPPSMNTTILLRSLSDIYANTEEVVGGDEQE-------------NEVMMVVSEEPTCFQEA
Query: VTEGRCLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILALAANQSW-----------------EEVYV
T L ELP G + + KWVFKLKKD + ++V++K RLV KG+ Q++GI+F+E+F+PV ++ +IR IL+LAA+ EE+Y+
Subjt: VTEGRCLTELPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILALAANQSW-----------------EEVYV
Query: TQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRR-EEEECVLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDL
QPEGFEV +KH V +L+K+LYGL+QAPR W ++ D +K + K + VY +R E +++ +YVDD+++ G + K K + F+M DL
Subjt: TQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRR-EEEECVLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDL
Query: GFLSYYLGIEV--EQQKGRILLKQPTYAKRILSQFGMADCNATNT
G LG+++ E+ ++ L Q Y +R+L +F M + +T
Subjt: GFLSYYLGIEV--EQQKGRILLKQPTYAKRILSQFGMADCNATNT
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.4e-16 | 32.43 | Show/hide |
Query: EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFE
E +YV QP GF V+ L +YGL+QAP WN ++ +LK +GF + E +Y R + + + VYVDDL+V S + ++ KQ++ +
Subjt: EEVYVTQPEGFEVPNEKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFE
Query: MSDLGFLSYYLGIEVEQ-QKGRILLKQPTYAKRILSQFGMADCNATNT
M DLG + +LG+ + Q G I L Y + S+ + T T
Subjt: MSDLGFLSYYLGIEVEQ-QKGRILLKQPTYAKRILSQFGMADCNATNT
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.6e-33 | 31.72 | Show/hide |
Query: LIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKV
++G +W+F K + +G + ++K RLVAKGY QR G+++ E F+PV + +IR++L +A ++SW ++VY++QP GF + + V
Subjt: LIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKV
Query: YRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKG
+L KALYGL+QAPRAW + L L +GF + + ++++ + + V + VYVDD+++TG+ ++ + +F + D L Y+LGIE ++
Subjt: YRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKG
Query: RILLKQPTYAKRILSQFGMADCNATNT
+ L Q Y +L++ M T
Subjt: RILLKQPTYAKRILSQFGMADCNATNT
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.8e-32 | 32.88 | Show/hide |
Query: LIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKV
++G +W+F K + +G + ++K RLVAKGY QR G+++ E F+PV + +IR++L +A ++SW +EVY++QP GF + V
Subjt: LIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILALAANQSW-----------------EEVYVTQPEGFEVPNEKHKV
Query: YRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKG
RL KA+YGL+QAPRAW + L L +GF I + ++++ + + + VYVDD+++TG+ T + + +F + + L Y+LGIE ++
Subjt: YRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKG
Query: RILLKQPTYAKRILSQFGM
+ L Q Y +L++ M
Subjt: RILLKQPTYAKRILSQFGM
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.6e-33 | 32.2 | Show/hide |
Query: LPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILALAANQSW-----------------EEVYVTQPEGFEVP
LP K IG KWV+K+K + +G + ++K RLVAKGY Q++GI+F E F+PV +L ++++ILA++A ++ EE+Y+ P G+
Subjt: LPLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILALAANQSW-----------------EEVYVTQPEGFEVP
Query: N----EKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYY
+ V L K++YGL+QA R W ++ +L GF + + +++ + V VYVDD+I+ ++ V++ K Q+ + F++ DLG L Y+
Subjt: N----EKHKVYRLSKALYGLRQAPRAWNIRLDRSLKDLGFRKCIQEQAVYIRREEEECVLVGVYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYY
Query: LGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
LG+E+ + I + Q YA +L + G+ C ++
Subjt: LGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATN
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 6.7e-11 | 40 | Show/hide |
Query: VYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATNT
+YVDD+++TGSS +N Q+ + F M DLG + Y+LGI+++ + L Q YA++IL+ GM DC +T
Subjt: VYVDDLIVTGSSTEKVNKFKQQMMAKFEMSDLGFLSYYLGIEVEQQKGRILLKQPTYAKRILSQFGMADCNATNT
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 4.3e-10 | 47.62 | Show/hide |
Query: PLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILALA
P+ ++G KWVFK K +G + + K RLVAKG+ Q +GI F E ++PV R TIR IL +A
Subjt: PLGHKLIGLKWVFKLKKDPNGEVVKHKTRLVAKGYVQRQGINFEEVFAPVARLDTIRVILALA
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