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CSPI05G01260 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G01260
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionrRNA intron-encoded homing endonuclease
Genome locationChr5:1711357..1711665
RNA-Seq ExpressionCSPI05G01260
SyntenyCSPI05G01260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1212993.1 hypothetical protein CJ030_MR5G025804 [Morella rubra]1.0e-1862.5Show/hide
Query:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVELA
        IYE+RTT KAFA DVFI+QE K  A+R+   +LVSTIND +QG AD+ALRT P  Y+KSK     GS+V +LKLKGID R P GVE A
Subjt:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVELA

KAF3648179.1 putative domain-containing protein-like [Capsicum annuum]3.6e-1963.64Show/hide
Query:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFA-KGSIVTKLKLKGIDRREPRGVELA
        IYE RTT KAF+ DVFI+QE KF A+RQ   +LVSTIND +QG AD+A RT P  Y+KSK    +GS+V KLKLKGID R P GVE A
Subjt:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFA-KGSIVTKLKLKGIDRREPRGVELA

KAF3660097.1 putative domain-containing protein-like [Capsicum annuum]1.8e-1862.5Show/hide
Query:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFA-KGSIVTKLKLKGIDRREPRGVELA
        IYE RTT KAF+ DVFI+QE K  A+RQ   +LVSTIND +QG AD+A RT P  Y+KSK    +GS+V KLKLKGID R P GVE A
Subjt:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFA-KGSIVTKLKLKGIDRREPRGVELA

PPS17158.1 hypothetical protein GOBAR_AA03427 [Gossypium barbadense]1.0e-1862.79Show/hide
Query:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVE
        IYE+RTT KAFA DVFI+QE K  A+R+   +LVSTIND +QG AD+A RT P  Y+KSK     GS+VT+LKLKGID R P GVE
Subjt:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVE

XP_022735763.1 uncharacterized protein LOC111289175 [Durio zibethinus]8.8e-1860.23Show/hide
Query:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVELA
        IYE+RTT KAFA DVFI+QE K  A+R+   +LVSTIND +QG AD+  RT P  Y+KSK     GS+V +LKLKGID R P GVE A
Subjt:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVELA

TrEMBL top hitse value%identityAlignment
A0A0A0LDF7 Uncharacterized protein9.5e-1863.1Show/hide
Query:  RTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVELA
        RTT KAFA DVFI+QE K  A+R+   +LVSTIND +QGLAD+ALRT P  Y+KSK     GS+V +LKLKGID R P GVE A
Subjt:  RTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVELA

A0A2P5YNP4 Uncharacterized protein5.0e-1962.79Show/hide
Query:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVE
        IYE+RTT KAFA DVFI+QE K  A+R+   +LVSTIND +QG AD+A RT P  Y+KSK     GS+VT+LKLKGID R P GVE
Subjt:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVE

A0A6A1VJU8 Uncharacterized protein5.0e-1962.5Show/hide
Query:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVELA
        IYE+RTT KAFA DVFI+QE K  A+R+   +LVSTIND +QG AD+ALRT P  Y+KSK     GS+V +LKLKGID R P GVE A
Subjt:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVELA

A0A6P5Y5P5 uncharacterized protein LOC1112891754.3e-1860.23Show/hide
Query:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVELA
        IYE+RTT KAFA DVFI+QE K  A+R+   +LVSTIND +QG AD+  RT P  Y+KSK     GS+V +LKLKGID R P GVE A
Subjt:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVELA

A0A6P5YFG8 uncharacterized protein LOC1112915674.3e-1860.23Show/hide
Query:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVELA
        IYE+RTT KAFA DVFI+QE K  A+R+   +LVSTIND +QG AD+  RT P  Y+KSK     GS+V +LKLKGID R P GVE A
Subjt:  IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAK-GSIVTKLKLKGIDRREPRGVELA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTTATGAAAAACGAACAACTGTGAAAGCATTTGCCAATGATGTTTTCATTGATCAAGAATTGAAGTTTAAGGCTCAAAGGCAACCAACTATTATCCTAGTCTCAACCAT
AAACGATGTTAACCAGGGATTGGCAGATATCGCTTTAAGGACTTCACCAGAACATTATGATAAATCAAAAGTCTTTGCCAAGGGGAGTATAGTTACAAAGCTGAAACTTA
AAGGAATTGACAGAAGGGAGCCACGTGGAGTGGAGCTTGCGGGGGTTAGTTTGACTCAACATAGGAAAACTTACCAAGTCCAGACATAG
mRNA sequenceShow/hide mRNA sequence
ATTTATGAAAAACGAACAACTGTGAAAGCATTTGCCAATGATGTTTTCATTGATCAAGAATTGAAGTTTAAGGCTCAAAGGCAACCAACTATTATCCTAGTCTCAACCAT
AAACGATGTTAACCAGGGATTGGCAGATATCGCTTTAAGGACTTCACCAGAACATTATGATAAATCAAAAGTCTTTGCCAAGGGGAGTATAGTTACAAAGCTGAAACTTA
AAGGAATTGACAGAAGGGAGCCACGTGGAGTGGAGCTTGCGGGGGTTAGTTTGACTCAACATAGGAAAACTTACCAAGTCCAGACATAG
Protein sequenceShow/hide protein sequence
IYEKRTTVKAFANDVFIDQELKFKAQRQPTIILVSTINDVNQGLADIALRTSPEHYDKSKVFAKGSIVTKLKLKGIDRREPRGVELAGVSLTQHRKTYQVQT