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CSPI05G01430 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G01430
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr5:2021197..2021757
RNA-Seq ExpressionCSPI05G01430
SyntenyCSPI05G01430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011658449.1 uncharacterized protein LOC105436008 [Cucumis sativus]4.0e-7783.7Show/hide
Query:  MTSISQQTKENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSER
        M S+SQQTKENG M IFYPML PHNYTMWTIK EAILD Q VWEAIEP +G EVDVKKDKK   YILQCI EDVLLQIAKKK+AKEIWD+LKTRYLGSER
Subjt:  MTSISQQTKENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSER

Query:  VKMARVQTLKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL
        VKMARV  LKSEFNVL MKETET+DE +GKIS+LASKFTTLGVALEDSSLVKKLLD VP+KYLLIVT IEQFQDLETM FEE +
Subjt:  VKMARVQTLKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL

XP_031737549.1 uncharacterized protein LOC116402439 [Cucumis sativus]1.1e-7986.96Show/hide
Query:  MTSISQQTKENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSER
        M SISQQTKENGGM+I Y MLTPHNYT+WTIKAEAILDAQGV EAIEPA+GAEVDVKKDKK  +YILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSER
Subjt:  MTSISQQTKENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSER

Query:  VKMARVQTLKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL
        VKMARVQTLKSEF+VL MKETET+DE +GKIS LASKFTTLGVALEDSSLVKKLLD VP+KYL IV  IEQFQDLETM FEE +
Subjt:  VKMARVQTLKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL

XP_031741709.1 uncharacterized protein LOC116403904 [Cucumis sativus]1.2e-7891.81Show/hide
Query:  MTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEF
        MTI YPMLTPHNYT+WTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSE+VKMARVQTLKSEF
Subjt:  MTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEF

Query:  NVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL
        NVL MKETETVDE SGKIS LASKFTTLGVALEDSSLVKKLLDFVP+KYLLIVTEIEQFQDLE    E+ +
Subjt:  NVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL

XP_031741713.1 uncharacterized protein LOC116403908 [Cucumis sativus]1.7e-7285.96Show/hide
Query:  MTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEF
        M+I YPMLTPHNYT+WTIKAEAIL+AQGVWEAIEPA+GAEVDVKKDKK  AYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEF
Subjt:  MTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEF

Query:  NVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL
        NVL MKE ET+DE  GKIS LASKFTTL VALEDSSLV KLLD VP+KYL IV  I+QFQDLETM FEE +
Subjt:  NVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL

XP_031745073.1 uncharacterized protein LOC116405251 [Cucumis sativus]7.8e-8187.5Show/hide
Query:  MTSISQQTKENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSER
        MTS SQQTKENGGM I YPMLTPHNYT+WTIKAEAILDAQGVWEAIEPA+GAEVDVKKDKK  AYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSER
Subjt:  MTSISQQTKENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSER

Query:  VKMARVQTLKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL
        VKMARVQTLK EFNVL MKETE +DE +GKIS LASKFTTLGVAL+DSSLVKKLLD VP+KYL IV  IEQFQDLETM FEE +
Subjt:  VKMARVQTLKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL

TrEMBL top hitse value%identityAlignment
A0A5N6M0J0 Integrase catalytic domain-containing protein5.9e-5055.11Show/hide
Query:  KENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQT
        KE   +T+  PMLT  NYT W IK EA++DAQG+W+A+EP  G  +D KK K   A+I Q IPE++LLQ+AKKKTA+E+W+SLK RYLG++RV+ A + T
Subjt:  KENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQT

Query:  LKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL
        LKSEF  L MKETET+DE +GK+SR+ S+ ++LG  LED+ LV+KL D VP+++L +V  +EQ+ D++TM FEE +
Subjt:  LKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL

A0A5N6MA89 Uncharacterized protein6.9e-5159.77Show/hide
Query:  KENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQT
        KE G +++  P LT  NYT W+IK EAI+DAQG+WE+IE  +G  VD KK K   A++ Q IPEDVLLQ+AKKKTAKE+W+SLK RYLG++RV+ AR+ T
Subjt:  KENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQT

Query:  LKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEE
        LKSEF+ L M+ETE++DE +GK+S + SK ++LG  LEDS +V+KLLD VP+KYL +V  IEQ  DL+TM FEE
Subjt:  LKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEE

A0A5N6NYJ8 CCHC-type domain-containing protein2.6e-5054.35Show/hide
Query:  MTSISQQTKENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSER
        + + S   K+   +++  P LT  NYT W IK EA++DAQG+WE+IEP  GA VD KK+K   A+I Q IPEDVLLQ+AKKKTAKEIWDSLK RY+G++R
Subjt:  MTSISQQTKENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSER

Query:  VKMARVQTLKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL
        V+ AR+ TLK+EF +L MKE E+VDE +GK++ + +K+ +LG  ++D  LV+KLLD VP+KYL +V  IEQ+ D++TM F+E +
Subjt:  VKMARVQTLKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL

Q0JH75 Os01g0879800 protein3.4e-5056.11Show/hide
Query:  SQQTKENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMA
        + ++   G +++ YP+LT  NY+ W IK EA ++AQG+W+AIEPA    VD+KKDK+  A +   +PEDVL QIAKKKTAKE+W+SLKTR+LG ERVK A
Subjt:  SQQTKENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMA

Query:  RVQTLKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL
        RVQTLKS+F  L MK+TE++DE +GKIS LA+K + LGV ++D   VKKLLD VP+K+L ++  IEQF DL++M F+E +
Subjt:  RVQTLKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL

Q2QUP7 Laccase3.4e-5056.11Show/hide
Query:  SQQTKENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMA
        + ++   G +++ YP+LT  NY+ W IK EA ++AQG+W+AIEPA    VD+KKDK+  A +   +PEDVL QIAKKKTAKE+W+SLKTR+LG ERVK A
Subjt:  SQQTKENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMA

Query:  RVQTLKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL
        RVQTLKS+F  L MK+TE++DE +GKIS LA+K + LGV ++D   VKKLLD VP+K+L ++  IEQF DL++M F+E +
Subjt:  RVQTLKSEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48720.1 unknown protein2.8e-0430.12Show/hide
Query:  PMLTPHNYTMWTIKAEAILDAQGVWEAIEPA---------------KGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKE
        P+LT  NY  W+++ +AIL A  VWE +E                  G     K+DKK    I Q + ED   ++ +  +AK+
Subjt:  PMLTPHNYTMWTIKAEAILDAQGVWEAIEPA---------------KGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGCATCTCGCAACAAACAAAGGAGAATGGCGGAATGACGATTTTCTACCCGATGTTAACTCCACACAACTACACGATGTGGACGATAAAAGCAGAAGCAATCCT
CGATGCCCAAGGAGTTTGGGAAGCAATAGAGCCAGCGAAAGGAGCCGAAGTGGATGTGAAGAAAGACAAGAAGGTGCATGCATACATTCTCCAATGCATCCCGGAAGACG
TGCTTCTACAAATCGCAAAGAAGAAGACCGCAAAGGAAATATGGGATAGTCTCAAGACAAGGTACTTGGGCAGTGAGCGGGTGAAGATGGCGAGAGTTCAAACCTTGAAG
AGTGAGTTTAATGTTCTTTGGATGAAGGAAACCGAGACGGTCGATGAGGTCTCTGGAAAAATCAGCAGATTAGCAAGCAAGTTCACCACCCTTGGAGTTGCACTTGAGGA
TTCATCATTGGTCAAGAAGCTCCTCGATTTCGTCCCTAACAAATATCTTCTCATTGTCACCGAAATCGAGCAATTCCAAGATCTCGAAACCATGTCGTTTGAAGAAGAAT
TGCACGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGCATCTCGCAACAAACAAAGGAGAATGGCGGAATGACGATTTTCTACCCGATGTTAACTCCACACAACTACACGATGTGGACGATAAAAGCAGAAGCAATCCT
CGATGCCCAAGGAGTTTGGGAAGCAATAGAGCCAGCGAAAGGAGCCGAAGTGGATGTGAAGAAAGACAAGAAGGTGCATGCATACATTCTCCAATGCATCCCGGAAGACG
TGCTTCTACAAATCGCAAAGAAGAAGACCGCAAAGGAAATATGGGATAGTCTCAAGACAAGGTACTTGGGCAGTGAGCGGGTGAAGATGGCGAGAGTTCAAACCTTGAAG
AGTGAGTTTAATGTTCTTTGGATGAAGGAAACCGAGACGGTCGATGAGGTCTCTGGAAAAATCAGCAGATTAGCAAGCAAGTTCACCACCCTTGGAGTTGCACTTGAGGA
TTCATCATTGGTCAAGAAGCTCCTCGATTTCGTCCCTAACAAATATCTTCTCATTGTCACCGAAATCGAGCAATTCCAAGATCTCGAAACCATGTCGTTTGAAGAAGAAT
TGCACGGATGA
Protein sequenceShow/hide protein sequence
MTSISQQTKENGGMTIFYPMLTPHNYTMWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLK
SEFNVLWMKETETVDEVSGKISRLASKFTTLGVALEDSSLVKKLLDFVPNKYLLIVTEIEQFQDLETMSFEEELHG