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CSPI05G01710 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G01710
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAUX/IAA protein
Genome locationChr5:2342130..2342912
RNA-Seq ExpressionCSPI05G01710
SyntenyCSPI05G01710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054146.1 AUX/IAA protein [Cucumis melo var. makuwa]3.7e-6182.31Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQY
        MLKATKKKLKGLWSKM    KKKKPN+TQTN YQYCC CHCSSS+H H   QPSAPPLPPWLN+ PTFLPP TQSQFEHPD AD M    V NQWSYQQY
Subjt:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQY

Query:  LVAEPVYGVPIIVETESGRGQKWKRLIKLFECFCPCFGITQQLYYIP
        LVAEPVYGVPIIV+TES R QKWKRLIKLF+CFCPCFGITQQLYYIP
Subjt:  LVAEPVYGVPIIVETESGRGQKWKRLIKLFECFCPCFGITQQLYYIP

KAG6601672.1 hypothetical protein SDJN03_06905, partial [Cucurbita argyrosperma subsp. sororia]5.9e-1948Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQ--YCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQ
        MLKA KKKLK  WS+ KK+ K   PN+         +CC CHCSS+       QPSAPPLPPWL+D   F PP      EHP+ A E+  PLVA    YQ
Subjt:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQ--YCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQ

Query:  QYLVAEPVYGVPIIVETESGR-GQKWKRL----------IKLFECFCPCF
        QY+  +PVYGVPIIV+T+S R G + +R           I++  CFCPCF
Subjt:  QYLVAEPVYGVPIIVETESGR-GQKWKRL----------IKLFECFCPCF

KGN49708.1 hypothetical protein Csa_018344 [Cucumis sativus]4.0e-9296.47Show/hide
Query:  MNEWNSFPQFDVLLSPQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQF
        MNEWNSF QFDVLL PQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQH QQQPSAPPLP WLNDAPTFLPPSTQSQF
Subjt:  MNEWNSFPQFDVLLSPQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQF

Query:  EHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRLIKLFECFCPCFGITQQLYYIP
        EHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRLIKLFEC CPCFGITQQLYY+P
Subjt:  EHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRLIKLFECFCPCFGITQQLYYIP

XP_016749822.1 uncharacterized protein LOC107958521 [Gossypium hirsutum]9.2e-1237.28Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQ--------QPSAPPLPPWL------NDAPTFLPPSTQ--SQFEHPDTAD
        M KA  KKLK  WS+ K+K K   P  +        CICHCS ST  H  Q        QPSAPPLPPWL      ++ PT      +   +F HP    
Subjt:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQ--------QPSAPPLPPWL------NDAPTFLPPSTQ--SQFEHPDTAD

Query:  EMVE--PLV--ANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRL--------IKLFECFCPCFGITQ
        + +E  P++  A   SYQQY+V+ PVYG P++ +T  GR ++            ++L  CFCPC  I +
Subjt:  EMVE--PLV--ANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRL--------IKLFECFCPCFGITQ

XP_022933064.1 uncharacterized protein LOC111439771 [Cucurbita moschata]2.7e-1947.97Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQY
        MLKA KKKLK  WS+ KK+ K   PN+       +CC CHCSS+       QPSAPPLPPWL+D     PPS     EHP+ A E+  PLVA    YQ Y
Subjt:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQY

Query:  LVAEPVYGVPIIVETESGR-GQKWKRL----------IKLFECFCPCF
        +  +PVYGVPIIV+T+S R G + +R           I++  CFCPCF
Subjt:  LVAEPVYGVPIIVETESGR-GQKWKRL----------IKLFECFCPCF

TrEMBL top hitse value%identityAlignment
A0A0A0KJG0 Uncharacterized protein1.9e-9296.47Show/hide
Query:  MNEWNSFPQFDVLLSPQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQF
        MNEWNSF QFDVLL PQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQH QQQPSAPPLP WLNDAPTFLPPSTQSQF
Subjt:  MNEWNSFPQFDVLLSPQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQF

Query:  EHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRLIKLFECFCPCFGITQQLYYIP
        EHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRLIKLFEC CPCFGITQQLYY+P
Subjt:  EHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRLIKLFECFCPCFGITQQLYYIP

A0A1U8PF34 uncharacterized protein LOC1079585214.4e-1237.28Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQ--------QPSAPPLPPWL------NDAPTFLPPSTQ--SQFEHPDTAD
        M KA  KKLK  WS+ K+K K   P  +        CICHCS ST  H  Q        QPSAPPLPPWL      ++ PT      +   +F HP    
Subjt:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQ--------QPSAPPLPPWL------NDAPTFLPPSTQ--SQFEHPDTAD

Query:  EMVE--PLV--ANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRL--------IKLFECFCPCFGITQ
        + +E  P++  A   SYQQY+V+ PVYG P++ +T  GR ++            ++L  CFCPC  I +
Subjt:  EMVE--PLV--ANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRL--------IKLFECFCPCFGITQ

A0A5A7UIP5 AUX/IAA protein1.8e-6182.31Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQY
        MLKATKKKLKGLWSKM    KKKKPN+TQTN YQYCC CHCSSS+H H   QPSAPPLPPWLN+ PTFLPP TQSQFEHPD AD M    V NQWSYQQY
Subjt:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQY

Query:  LVAEPVYGVPIIVETESGRGQKWKRLIKLFECFCPCFGITQQLYYIP
        LVAEPVYGVPIIV+TES R QKWKRLIKLF+CFCPCFGITQQLYYIP
Subjt:  LVAEPVYGVPIIVETESGRGQKWKRLIKLFECFCPCFGITQQLYYIP

A0A5J5VM38 Uncharacterized protein4.4e-1237.28Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQ--------QPSAPPLPPWL------NDAPTFLPPSTQ--SQFEHPDTAD
        M KA  KKLK  WS+ K+K K   P  +        CICHCS ST  H  Q        QPSAPPLPPWL      ++ PT      +   +F HP    
Subjt:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQ--------QPSAPPLPPWL------NDAPTFLPPSTQ--SQFEHPDTAD

Query:  EMVE--PLV--ANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRL--------IKLFECFCPCFGITQ
        + +E  P++  A   SYQQY+V+ PVYG P++ +T  GR ++            ++L  CFCPC  I +
Subjt:  EMVE--PLV--ANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRL--------IKLFECFCPCFGITQ

A0A6J1EYP6 uncharacterized protein LOC1114397711.3e-1947.97Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQY
        MLKA KKKLK  WS+ KK+ K   PN+       +CC CHCSS+       QPSAPPLPPWL+D     PPS     EHP+ A E+  PLVA    YQ Y
Subjt:  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQY

Query:  LVAEPVYGVPIIVETESGR-GQKWKRL----------IKLFECFCPCF
        +  +PVYGVPIIV+T+S R G + +R           I++  CFCPCF
Subjt:  LVAEPVYGVPIIVETESGR-GQKWKRL----------IKLFECFCPCF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAATGGAATTCATTCCCCCAGTTTGATGTTCTTCTTTCACCACAGATTCAAAACCCCACCATAATGCTTAAAGCCACAAAGAAGAAACTCAAAGGATTATGGTC
CAAAATGAAGAAGAAGAATAAGAAGAAAAAACCAAACGAAACCCAAACAAATTCCTACCAATACTGCTGCATTTGCCATTGCTCCTCCTCAACCCATCAGCATCAGCAGC
AGCAGCCCTCAGCTCCCCCACTTCCGCCATGGCTCAACGATGCTCCCACCTTTCTGCCGCCTTCAACGCAATCGCAATTTGAACATCCAGACACAGCTGATGAAATGGTG
GAGCCGCTTGTGGCTAATCAGTGGTCTTACCAGCAATACTTGGTGGCAGAGCCGGTTTACGGGGTGCCGATCATCGTGGAAACTGAAAGTGGAAGAGGTCAGAAATGGAA
AAGGTTGATTAAGTTATTTGAGTGCTTCTGCCCCTGTTTTGGTATTACACAACAACTTTACTACATACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGAATGGAATTCATTCCCCCAGTTTGATGTTCTTCTTTCACCACAGATTCAAAACCCCACCATAATGCTTAAAGCCACAAAGAAGAAACTCAAAGGATTATGGTC
CAAAATGAAGAAGAAGAATAAGAAGAAAAAACCAAACGAAACCCAAACAAATTCCTACCAATACTGCTGCATTTGCCATTGCTCCTCCTCAACCCATCAGCATCAGCAGC
AGCAGCCCTCAGCTCCCCCACTTCCGCCATGGCTCAACGATGCTCCCACCTTTCTGCCGCCTTCAACGCAATCGCAATTTGAACATCCAGACACAGCTGATGAAATGGTG
GAGCCGCTTGTGGCTAATCAGTGGTCTTACCAGCAATACTTGGTGGCAGAGCCGGTTTACGGGGTGCCGATCATCGTGGAAACTGAAAGTGGAAGAGGTCAGAAATGGAA
AAGGTTGATTAAGTTATTTGAGTGCTTCTGCCCCTGTTTTGGTATTACACAACAACTTTACTACATACCATAGTAATTTCTACTAATGTGTTTTGTTTGTTTGTGATTGT
TATATTTAGAGGTGAACTTCTGGATTCCATGAAGTTACCGAAACAAACTACAAATATACACACAAGTATGAACGATTCTTTTGTGGGTGAGAGAGTCGGTTTACATTTCA
CGTTTGTAGAAAAGATATTGAAGAAATCCAAACAAGAAGTATTTTTAAATTTGTTATATGATCACTATTCATTAGGCAATCCAAACAAGAATAAAGGATACAACTCCTTT
TGATTTCCCCCCC
Protein sequenceShow/hide protein sequence
MNEWNSFPQFDVLLSPQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHQQQQPSAPPLPPWLNDAPTFLPPSTQSQFEHPDTADEMV
EPLVANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRLIKLFECFCPCFGITQQLYYIP