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CSPI05G01740 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G01740
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr5:2389437..2390299
RNA-Seq ExpressionCSPI05G01740
SyntenyCSPI05G01740
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054121.1 hypothetical protein E6C27_scaffold131G00330 [Cucumis melo var. makuwa]1.4e-7877.45Show/hide
Query:  MEEGKEGRKRSTGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDD
        MEE KE RK S GS KKKRRKSLFEWSKGEELNLLKKLVEFN+KNISREEFYPFLRNGSLAEVS+ QIF+KIQ+LK EYL+ KLELRKMRKRNVK+EDDD
Subjt:  MEEGKEGRKRSTGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDD

Query:  DYNNKRDEGFELSNQVWGKVDETERASISKVLEVCRRNYYEDFFESEELDVKLFNPSFQDAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPIT
        DYN+KRDEGFELSNQ+WG+VDETERAS SK LEVC RNYYE FFES  LDV+LF+PSF DA KKDID LFNLEH   L K+KL +++++LK D+IQA + 
Subjt:  DYNNKRDEGFELSNQVWGKVDETERASISKVLEVCRRNYYEDFFESEELDVKLFNPSFQDAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPIT

Query:  DPTH
        +PT+
Subjt:  DPTH

KAG6575378.1 hypothetical protein SDJN03_26017, partial [Cucurbita argyrosperma subsp. sororia]9.7e-0839.8Show/hide
Query:  KRDEGFELSNQVWGKVD-ETERASISKVLEVCRRNYYEDFFESEELDVKLFNPSFQDAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPITD
        ++DE FELS +  G+ + ET+  S S +LEV  +  +E   E   L + LF PS  DA KK++D LF L++Q  L K+ L ++L +LK+DI++   T+
Subjt:  KRDEGFELSNQVWGKVD-ETERASISKVLEVCRRNYYEDFFESEELDVKLFNPSFQDAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPITD

KAG6585881.1 hypothetical protein SDJN03_18614, partial [Cucurbita argyrosperma subsp. sororia]6.7e-3343.52Show/hide
Query:  SGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDDDYNNKRDEGFELS
        S ++K+ K+LF+WS+GEELNLL KLVEF+  N+  E+FYPFLR+GSLA+V + QIF+KIQ+LKR++L+      K+  R   +   DD  N+RDE FELS
Subjt:  SGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDDDYNNKRDEGFELS

Query:  NQVWGKVD---ETERASISKVLEVCRRNYYEDFFESEELDVKLFNPSFQDAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPITDPT
        N++WG+ +   ET+  S SK  +    + +E  FE   L +  F PSF  A KK++D L +L++   L K+ L ++L +LK+ + Q    + T
Subjt:  NQVWGKVD---ETERASISKVLEVCRRNYYEDFFESEELDVKLFNPSFQDAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPITDPT

KGN49711.1 hypothetical protein Csa_018385 [Cucumis sativus]1.3e-8486.34Show/hide
Query:  MEEGKEGRKRSTGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDD
        MEEGKEGRKRSTGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDD
Subjt:  MEEGKEGRKRSTGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDD

Query:  DYNNKRDEGFELSNQVWGKVDETERASISKVLEVCRRNYYEDFFESEELDVKLFNPSFQDAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPIT
        D+NNKRDEGFELSN+VWGKVDETERASISKVLE                          DAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPIT
Subjt:  DYNNKRDEGFELSNQVWGKVDETERASISKVLEVCRRNYYEDFFESEELDVKLFNPSFQDAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPIT

Query:  DPTHQ
        DPTHQ
Subjt:  DPTHQ

TrEMBL top hitse value%identityAlignment
A0A0A0KPQ5 Uncharacterized protein6.2e-8586.34Show/hide
Query:  MEEGKEGRKRSTGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDD
        MEEGKEGRKRSTGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDD
Subjt:  MEEGKEGRKRSTGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDD

Query:  DYNNKRDEGFELSNQVWGKVDETERASISKVLEVCRRNYYEDFFESEELDVKLFNPSFQDAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPIT
        D+NNKRDEGFELSN+VWGKVDETERASISKVLE                          DAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPIT
Subjt:  DYNNKRDEGFELSNQVWGKVDETERASISKVLEVCRRNYYEDFFESEELDVKLFNPSFQDAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPIT

Query:  DPTHQ
        DPTHQ
Subjt:  DPTHQ

A0A5A7UKP8 Uncharacterized protein6.6e-7977.45Show/hide
Query:  MEEGKEGRKRSTGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDD
        MEE KE RK S GS KKKRRKSLFEWSKGEELNLLKKLVEFN+KNISREEFYPFLRNGSLAEVS+ QIF+KIQ+LK EYL+ KLELRKMRKRNVK+EDDD
Subjt:  MEEGKEGRKRSTGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDD

Query:  DYNNKRDEGFELSNQVWGKVDETERASISKVLEVCRRNYYEDFFESEELDVKLFNPSFQDAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPIT
        DYN+KRDEGFELSNQ+WG+VDETERAS SK LEVC RNYYE FFES  LDV+LF+PSF DA KKDID LFNLEH   L K+KL +++++LK D+IQA + 
Subjt:  DYNNKRDEGFELSNQVWGKVDETERASISKVLEVCRRNYYEDFFESEELDVKLFNPSFQDAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPIT

Query:  DPTH
        +PT+
Subjt:  DPTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGGGGAAGGAGGGAAGAAAGAGGTCAACGGGATCAGGAAAGAAGAAAAGGAGGAAGAGTTTGTTTGAATGGAGTAAAGGGGAAGAGCTAAATCTACTGAAGAA
GCTGGTCGAGTTCAATACGAAGAACATTAGTCGGGAGGAATTTTATCCGTTCTTGAGAAATGGGTCATTGGCGGAGGTGTCCAGGACCCAAATATTTGAGAAGATTCAAG
AACTGAAAAGGGAATATTTGAAGCAGAAATTAGAGTTGAGAAAAATGAGAAAACGAAATGTGAAAATGGAGGATGATGATGATTATAATAACAAGAGAGACGAGGGTTTT
GAGTTATCAAATCAAGTTTGGGGTAAAGTTGATGAAACTGAAAGGGCTTCTATCTCTAAAGTGTTGGAGGTATGCAGAAGGAATTATTATGAAGATTTTTTTGAAAGTGA
AGAGCTTGATGTAAAACTATTTAACCCATCTTTTCAGGACGCAGCCAAGAAGGATATTGACCGTTTGTTCAATCTTGAACATCAGGCCTTCTTATTCAAATCTAAGTTGG
TGTCTAAACTTGTCAAACTAAAGAACGACATTATTCAAGCTCCAATCACGGATCCTACCCATCAATAA
mRNA sequenceShow/hide mRNA sequence
AAAAAGGCAATTTTAAGAGAGAATAAGCAATTTTCTATCTCCTAATGGACCTCAAAAGTAGACTATGGGTGATGTTGAAATATGTAACACACGCGCACACACACAAATAT
ATCAACGTTACTCAATGTCTTGATATTATGCAATTTATTGTGACTCGATGTTTAGAGATTTGAGTAGGGTGAGATTGACGATATGGAAGAGGGGAAGGAGGGAAGAAAGA
GGTCAACGGGATCAGGAAAGAAGAAAAGGAGGAAGAGTTTGTTTGAATGGAGTAAAGGGGAAGAGCTAAATCTACTGAAGAAGCTGGTCGAGTTCAATACGAAGAACATT
AGTCGGGAGGAATTTTATCCGTTCTTGAGAAATGGGTCATTGGCGGAGGTGTCCAGGACCCAAATATTTGAGAAGATTCAAGAACTGAAAAGGGAATATTTGAAGCAGAA
ATTAGAGTTGAGAAAAATGAGAAAACGAAATGTGAAAATGGAGGATGATGATGATTATAATAACAAGAGAGACGAGGGTTTTGAGTTATCAAATCAAGTTTGGGGTAAAG
TTGATGAAACTGAAAGGGCTTCTATCTCTAAAGTGTTGGAGGTATGCAGAAGGAATTATTATGAAGATTTTTTTGAAAGTGAAGAGCTTGATGTAAAACTATTTAACCCA
TCTTTTCAGGACGCAGCCAAGAAGGATATTGACCGTTTGTTCAATCTTGAACATCAGGCCTTCTTATTCAAATCTAAGTTGGTGTCTAAACTTGTCAAACTAAAGAACGA
CATTATTCAAGCTCCAATCACGGATCCTACCCATCAATAATCCACCTTGTTCACCTTTTTTTCTTTTTTATAATTCATTTTTCTTCACCGTTG
Protein sequenceShow/hide protein sequence
MEEGKEGRKRSTGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDDDYNNKRDEGF
ELSNQVWGKVDETERASISKVLEVCRRNYYEDFFESEELDVKLFNPSFQDAAKKDIDRLFNLEHQAFLFKSKLVSKLVKLKNDIIQAPITDPTHQ