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CSPI05G02370 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G02370
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionC2H2-type domain-containing protein
Genome locationChr5:3050025..3050399
RNA-Seq ExpressionCSPI05G02370
SyntenyCSPI05G02370
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062869.1 putative transmembrane protein [Cucumis melo var. makuwa]2.5e-5991.94Show/hide
Query:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP
        MPQVDWRTGSSPFHIRLGHIA PHPLPSR FQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG NL PDW CIPKQPDSLTAPRGATGSERNGALTL GAP
Subjt:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP

Query:  FQGTCARSAAEDASPDYISNIDDA
        FQGTCARSAAEDASPDY S+++DA
Subjt:  FQGTCARSAAEDASPDYISNIDDA

KAE8637537.1 hypothetical protein CSA_017393 [Cucumis sativus]2.3e-6093.55Show/hide
Query:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP
        MPQVDWRTGSSPFHIRLGHIA PHPLPSR FQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG NL PDW CIPKQPDSLTAPRGATGSERNGALTL GAP
Subjt:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP

Query:  FQGTCARSAAEDASPDYISNIDDA
        FQGTCARSAAEDASPDY SN+DDA
Subjt:  FQGTCARSAAEDASPDYISNIDDA

XP_022933354.1 uncharacterized protein LOC111440692 [Cucurbita moschata]6.8e-5789.52Show/hide
Query:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP
        MPQVDWRTG  PFHIRLGHIA PHPLPSR FQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG NL PDW CIPKQPDSLTAPRGATGSERNGALTL GAP
Subjt:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP

Query:  FQGTCARSAAEDASPDYISNIDDA
        FQGTCARS AEDASPDY SN + A
Subjt:  FQGTCARSAAEDASPDYISNIDDA

XP_023520622.1 uncharacterized protein LOC111784033 [Cucurbita pepo subsp. pepo]1.5e-5689.52Show/hide
Query:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP
        MPQVDWRTG SPFHIRL HIA PHPLPSR FQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG NL PDW CIPKQPDSLTAPRGATGSERNGALTL GAP
Subjt:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP

Query:  FQGTCARSAAEDASPDYISNIDDA
        FQGTCARS AEDASPDY SN + A
Subjt:  FQGTCARSAAEDASPDYISNIDDA

XP_023552350.1 uncharacterized protein LOC111810043 [Cucurbita pepo subsp. pepo]1.5e-5689.52Show/hide
Query:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP
        MPQVDWRTG SPFHIRL HIA PHPLPSR FQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG NL PDW CIPKQPDSLTAPRGATGSERNGALTL GAP
Subjt:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP

Query:  FQGTCARSAAEDASPDYISNIDDA
        FQGTCARS AEDASPDY SN + A
Subjt:  FQGTCARSAAEDASPDYISNIDDA

TrEMBL top hitse value%identityAlignment
A0A0A0KEK9 Uncharacterized protein1.1e-6093.55Show/hide
Query:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP
        MPQVDWRTGSSPFHIRLGHIA PHPLPSR FQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG NL PDW CIPKQPDSLTAPRGATGSERNGALTL GAP
Subjt:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP

Query:  FQGTCARSAAEDASPDYISNIDDA
        FQGTCARSAAEDASPDY SN+DDA
Subjt:  FQGTCARSAAEDASPDYISNIDDA

A0A2N9IEW7 Uncharacterized protein1.0e-5087.39Show/hide
Query:  PQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAPF
        P+VD RTGSSPFHIR G IA PHPLPSR FQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG NL PDW CIPKQPDS TAPRGATGS  NGALTL GAPF
Subjt:  PQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAPF

Query:  QGTCARSAAEDASPDYISN
        QGT ARSAAEDASPDY SN
Subjt:  QGTCARSAAEDASPDYISN

A0A5A7VB87 Putative transmembrane protein1.2e-5991.94Show/hide
Query:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP
        MPQVDWRTGSSPFHIRLGHIA PHPLPSR FQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG NL PDW CIPKQPDSLTAPRGATGSERNGALTL GAP
Subjt:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP

Query:  FQGTCARSAAEDASPDYISNIDDA
        FQGTCARSAAEDASPDY S+++DA
Subjt:  FQGTCARSAAEDASPDYISNIDDA

A0A6J1EZI8 uncharacterized protein LOC1114406923.3e-5789.52Show/hide
Query:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP
        MPQVDWRTG  PFHIRLGHIA PHPLPSR FQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG NL PDW CIPKQPDSLTAPRGATGSERNGALTL GAP
Subjt:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP

Query:  FQGTCARSAAEDASPDYISNIDDA
        FQGTCARS AEDASPDY SN + A
Subjt:  FQGTCARSAAEDASPDYISNIDDA

A0A6J1IK28 uncharacterized protein LOC1114757691.8e-5587.9Show/hide
Query:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP
        MPQVDWRTG  PFHIRLGHI  PHPLPSR FQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG NL PDW  IPKQPDSLTAPRGATGSERNGALTL GAP
Subjt:  MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAP

Query:  FQGTCARSAAEDASPDYISNIDDA
        FQGTCARS AEDASPDY SN + A
Subjt:  FQGTCARSAAEDASPDYISNIDDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCAAGTCGATTGGCGGACCGGCTCGTCACCGTTCCACATCCGACTGGGGCACATCGCCGACCCCCATCCGCTTCCCTCCCGAATATTTCAAGCACTATTTGACTC
TCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACATAATTTACTGCCCGACTGGGCCTGCATTCCCA
AACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTTTGGCGCCCCCTTCCAGGGTACTTGTGCCCGATCCGCCGCT
GAGGACGCTTCTCCAGACTACATTTCGAACATCGACGACGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCCAAGTCGATTGGCGGACCGGCTCGTCACCGTTCCACATCCGACTGGGGCACATCGCCGACCCCCATCCGCTTCCCTCCCGAATATTTCAAGCACTATTTGACTC
TCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACATAATTTACTGCCCGACTGGGCCTGCATTCCCA
AACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTTTGGCGCCCCCTTCCAGGGTACTTGTGCCCGATCCGCCGCT
GAGGACGCTTCTCCAGACTACATTTCGAACATCGACGACGCCTGA
Protein sequenceShow/hide protein sequence
MPQVDWRTGSSPFHIRLGHIADPHPLPSRIFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGHNLLPDWACIPKQPDSLTAPRGATGSERNGALTLFGAPFQGTCARSAA
EDASPDYISNIDDA