; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G02380 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G02380
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionrRNA intron-encoded homing endonuclease
Genome locationChr5:3050618..3051717
RNA-Seq ExpressionCSPI05G02380
SyntenyCSPI05G02380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3026779.1 Hypothetical predicted protein [Olea europaea subsp. europaea]3.2e-6060.96Show/hide
Query:  VCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRSYRLNGPVKCSDRGDVGG----EPAEGSLSMPK-
        VCDALRCSGPHARYTDVFNE IALADR GSLQLLVFNEEFLVSASHQLALTTSLP V    HTARRSYRLNGPVKCSDRGDVGG       E    +P+ 
Subjt:  VCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRSYRLNGPVKCSDRGDVGG----EPAEGSLSMPK-

Query:  TSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPARLKQNPGVGRAKELEMNSPAPRSGLGGAGGGAFWSYYSQRLSATDILGLASMKNVAKCDTWCELQ
           D    ++  P A     RRA          P+    NPG    KE         +       G   +  S+RLSATDI  LASMKN AKCDTWCELQ
Subjt:  TSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPARLKQNPGVGRAKELEMNSPAPRSGLGGAGGGAFWSYYSQRLSATDILGLASMKNVAKCDTWCELQ

Query:  DPVNHRVFEHKLRSEPSGRGHVCLGVTH
        +PVNHRVFE KLR  PS RGHVCLGVTH
Subjt:  DPVNHRVFEHKLRSEPSGRGHVCLGVTH

KAF1856293.1 hypothetical protein Lal_00046678 [Lupinus albus]4.7e-6757.14Show/hide
Query:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRS
        MGGGAWPFLVGGAICLVNSVNERDLSLLTSY EVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLP V    HTARRS
Subjt:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRS

Query:  YRLNGPVKCSDRGDVG-----------------GEPAEGSLSMPKTSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPARLKQNPGVGRAKELEMNSPA
        YRLNGPVKCSD GDVG                 GEPAEGSLS P    DP        +A   +G    C ++   S P      P   R  +   + P+
Subjt:  YRLNGPVKCSDRGDVG-----------------GEPAEGSLSMPKTSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPARLKQNPGVGRAKELEMNSPA

Query:  PRSGLGGAGGGAFWSYYSQRLSATDILGLASMKNVAKC--DTWCELQ--DPVNHRVFEHKLRSEPSGRGHVCLGVTHRCP
         R                 R   T IL       +  C  +   E++  +PVNHRVFE KLR +P GRGH CLGV HRCP
Subjt:  PRSGLGGAGGGAFWSYYSQRLSATDILGLASMKNVAKC--DTWCELQ--DPVNHRVFEHKLRSEPSGRGHVCLGVTHRCP

KAF9662358.1 hypothetical protein SADUNF_Sadunf18G0044900 [Salix dunnii]6.3e-5653.08Show/hide
Query:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRS
        MGGGAW FLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPG                                   RRS
Subjt:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRS

Query:  YRLNGPVKCSDRGDVG-GEPAEGSLSMPKTSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPARLKQNPGVGRAKELEMNSPAPRSGLGGAGGGAFWSY
                   R  V  GEPAEGSLS P  +  P     +K  + G    RA   +   +        NPG   AKE+E    A  + + G         
Subjt:  YRLNGPVKCSDRGDVG-GEPAEGSLSMPKTSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPARLKQNPGVGRAKELEMNSPAPRSGLGGAGGGAFWSY

Query:  YSQRLSATDILGLASMKNVAKCDTWCELQDPVNHRVFEHKLRSEPSGRGHVCLGVTHRCP
          +RLSATDI  LASMKNVAKCDTWCELQ+PVNHRVFE KLR  P GRGHVCLGV HR P
Subjt:  YSQRLSATDILGLASMKNVAKCDTWCELQDPVNHRVFEHKLRSEPSGRGHVCLGVTHRCP

KAG5568993.1 hypothetical protein H5410_064037 [Solanum commersonii]5.5e-8463.11Show/hide
Query:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRS
        MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNE IALADRPGSLQLLVFNEEFLVSASHQLALTTSLP V    HTARRS
Subjt:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRS

Query:  YRLNGPVKCSDRGDVGGEPAEGSLSMPKTS----------------NDPRTRLQNKPTASGATGRRACCFLAFLLSLPARLKQNPGVGRAKELEMNSPAP
        YRLN PVKCSDRGDVGG       S+P TS                NDPRTR +         GRRA         L ARL   P   RA+     +  P
Subjt:  YRLNGPVKCSDRGDVGGEPAEGSLSMPKTS----------------NDPRTRLQNKPTASGATGRRACCFLAFLLSLPARLKQNPGVGRAKELEMNSPAP

Query:  RSG-----LGGAG---GGAFWSYYSQRLSATDILGLASMKNVAKCDTWCELQDPVNHRVFEHKLRSEPSGRGHVCLGVTHRCPHPHNFPAHRVGSLCGRG
        R G     L  A    GG    +  +RLSATDI  LASMKNVAKCDTWCELQ+PVNHRVFE KLR +P GRGHVCLGVTHR        A R      RG
Subjt:  RSG-----LGGAG---GGAFWSYYSQRLSATDILGLASMKNVAKCDTWCELQDPVNHRVFEHKLRSEPSGRGHVCLGVTHRCPHPHNFPAHRVGSLCGRG

Query:  HTLAYRAHR
          LA RA R
Subjt:  HTLAYRAHR

XP_022720746.1 uncharacterized protein LOC111278348 [Durio zibethinus]2.6e-4949.43Show/hide
Query:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRS
        MGGGAWPFLVG  ICLVNS+NERDL+LLTSYAEVCDALRCSGPHARYTDVFNESIA ADR GSL                                 R +
Subjt:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRS

Query:  YRLNGPVKCSDRGDVGGEPAEGSLSMPKTSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPA-RLKQNPGVGRAKELEMNSPA-----PRSGLGGAGGG
         R  G V  + RG   G P        +   D R      P   G   RR           PA R ++ PG  RAKE +    A     P +        
Subjt:  YRLNGPVKCSDRGDVGGEPAEGSLSMPKTSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPA-RLKQNPGVGRAKELEMNSPA-----PRSGLGGAGGG

Query:  AFWSYYSQRLSATDILGLASMKNVAKCDTWCELQDPVNHRVFEHKLRSEPSGRGHVCLGVTHRCP
        +F    ++RLSATDI  LASMKNVAKCDTWCELQ+PVNHRVFE KLR +P GRGH CLGV HR P
Subjt:  AFWSYYSQRLSATDILGLASMKNVAKCDTWCELQDPVNHRVFEHKLRSEPSGRGHVCLGVTHRCP

TrEMBL top hitse value%identityAlignment
A0A0A0LPG1 Uncharacterized protein1.3e-3857.51Show/hide
Query:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTAR-R
        MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAE+                    IA+    G  + +    E      +  AL T  PS+     +    
Subjt:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTAR-R

Query:  SYRLNGPVKCSDRGDVGGEPAEGSLSMPKTSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPARLKQNPGVGRAKELEMNSPAPRS-GLGGA
          R  G  + S      GEPAEGSLSMPKTSNDPRTRLQNKPTASGA GRRA   LAFLL LPARLKQN GVGRAKELEMNSPAP S G+ GA
Subjt:  SYRLNGPVKCSDRGDVGGEPAEGSLSMPKTSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPARLKQNPGVGRAKELEMNSPAPRS-GLGGA

A0A5N6LBT3 Uncharacterized protein6.0e-4482.5Show/hide
Query:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPG-----------SLQLLVFNEEFLVSASHQLALTTSLPS
        MGGGAWPFLVGGAICLVNSVNERDLSLLTSY E CDALRCSGPHARYTDVFNE IALADRPG           SLQLLV NEEFLVSASHQLALTTSLP 
Subjt:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPG-----------SLQLLVFNEEFLVSASHQLALTTSLPS

Query:  VHTAHHTARRSYRLNGPVKC
        V    HTA RSYRLNGPVKC
Subjt:  VHTAHHTARRSYRLNGPVKC

A0A5N6NFM9 Uncharacterized protein1.2e-4483.33Show/hide
Query:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPG-----------SLQLLVFNEEFLVSASHQLALTTSLPS
        MGGGAWPFLVGGAICLVNSVNE+DLSLLTSYAEVCDALRCSGPHARYTDVFNE IALADRPG           SLQLLV NEEFLVS SHQLALTTSLP 
Subjt:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPG-----------SLQLLVFNEEFLVSASHQLALTTSLPS

Query:  VHTAHHTARRSYRLNGPVKC
        V    HTARRSYRLNGPVKC
Subjt:  VHTAHHTARRSYRLNGPVKC

A0A6A5L9L7 Uncharacterized protein2.3e-6757.14Show/hide
Query:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRS
        MGGGAWPFLVGGAICLVNSVNERDLSLLTSY EVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLP V    HTARRS
Subjt:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRS

Query:  YRLNGPVKCSDRGDVG-----------------GEPAEGSLSMPKTSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPARLKQNPGVGRAKELEMNSPA
        YRLNGPVKCSD GDVG                 GEPAEGSLS P    DP        +A   +G    C ++   S P      P   R  +   + P+
Subjt:  YRLNGPVKCSDRGDVG-----------------GEPAEGSLSMPKTSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPARLKQNPGVGRAKELEMNSPA

Query:  PRSGLGGAGGGAFWSYYSQRLSATDILGLASMKNVAKC--DTWCELQ--DPVNHRVFEHKLRSEPSGRGHVCLGVTHRCP
         R                 R   T IL       +  C  +   E++  +PVNHRVFE KLR +P GRGH CLGV HRCP
Subjt:  PRSGLGGAGGGAFWSYYSQRLSATDILGLASMKNVAKC--DTWCELQ--DPVNHRVFEHKLRSEPSGRGHVCLGVTHRCP

A0A6P5WYZ9 uncharacterized protein LOC1112783481.2e-4949.43Show/hide
Query:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRS
        MGGGAWPFLVG  ICLVNS+NERDL+LLTSYAEVCDALRCSGPHARYTDVFNESIA ADR GSL                                 R +
Subjt:  MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRS

Query:  YRLNGPVKCSDRGDVGGEPAEGSLSMPKTSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPA-RLKQNPGVGRAKELEMNSPA-----PRSGLGGAGGG
         R  G V  + RG   G P        +   D R      P   G   RR           PA R ++ PG  RAKE +    A     P +        
Subjt:  YRLNGPVKCSDRGDVGGEPAEGSLSMPKTSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPA-RLKQNPGVGRAKELEMNSPA-----PRSGLGGAGGG

Query:  AFWSYYSQRLSATDILGLASMKNVAKCDTWCELQDPVNHRVFEHKLRSEPSGRGHVCLGVTHRCP
        +F    ++RLSATDI  LASMKNVAKCDTWCELQ+PVNHRVFE KLR +P GRGH CLGV HR P
Subjt:  AFWSYYSQRLSATDILGLASMKNVAKCDTWCELQDPVNHRVFEHKLRSEPSGRGHVCLGVTHRCP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTCTGTGATGC
CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTATAGCCTTGGCCGACAGGCCCGGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCC
TAGTAAGCGCGAGTCATCAACTCGCGTTGACTACGTCCCTGCCCTCTGTACACACTGCCCATCACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCG
GATCGCGGCGACGTGGGCGGTGAACCTGCGGAAGGATCATTGTCGATGCCTAAAACATCAAACGACCCGCGAACGCGTTTACAAAACAAACCGACCGCGTCGGGGGCGAC
TGGGAGGCGAGCATGCTGTTTTCTTGCCTTCCTCCTCTCCCTCCCAGCGCGTCTAAAACAAAACCCCGGCGTAGGTCGGGCCAAGGAACTTGAAATGAATTCGCCCGCCC
CTCGTTCTGGCCTCGGTGGTGCAGGGGGCGGAGCATTCTGGTCGTATTACTCACAACGACTCTCGGCAACGGATATCTTGGGTCTCGCATCGATGAAGAACGTAGCGAAA
TGCGATACTTGGTGTGAATTGCAGGATCCCGTGAACCACCGAGTATTTGAACACAAGTTGCGCTCGGAGCCTTCTGGCCGAGGGCATGTCTGCCTGGGCGTCACGCATCG
TTGTCCTCACCCACACAACTTCCCCGCCCACCGTGTCGGCTCGTTGTGCGGGCGAGGGCACACACTGGCCTACCGTGCGCATCGTCGTGCGGATGGCTTAAATTTGAGTC
CTCGACGCTCGTTGTCGCGACACTACGGTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTCTGTGATGC
CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTATAGCCTTGGCCGACAGGCCCGGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCC
TAGTAAGCGCGAGTCATCAACTCGCGTTGACTACGTCCCTGCCCTCTGTACACACTGCCCATCACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCG
GATCGCGGCGACGTGGGCGGTGAACCTGCGGAAGGATCATTGTCGATGCCTAAAACATCAAACGACCCGCGAACGCGTTTACAAAACAAACCGACCGCGTCGGGGGCGAC
TGGGAGGCGAGCATGCTGTTTTCTTGCCTTCCTCCTCTCCCTCCCAGCGCGTCTAAAACAAAACCCCGGCGTAGGTCGGGCCAAGGAACTTGAAATGAATTCGCCCGCCC
CTCGTTCTGGCCTCGGTGGTGCAGGGGGCGGAGCATTCTGGTCGTATTACTCACAACGACTCTCGGCAACGGATATCTTGGGTCTCGCATCGATGAAGAACGTAGCGAAA
TGCGATACTTGGTGTGAATTGCAGGATCCCGTGAACCACCGAGTATTTGAACACAAGTTGCGCTCGGAGCCTTCTGGCCGAGGGCATGTCTGCCTGGGCGTCACGCATCG
TTGTCCTCACCCACACAACTTCCCCGCCCACCGTGTCGGCTCGTTGTGCGGGCGAGGGCACACACTGGCCTACCGTGCGCATCGTCGTGCGGATGGCTTAAATTTGAGTC
CTCGACGCTCGTTGTCGCGACACTACGGTGGTTGA
Protein sequenceShow/hide protein sequence
MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNESIALADRPGSLQLLVFNEEFLVSASHQLALTTSLPSVHTAHHTARRSYRLNGPVKCS
DRGDVGGEPAEGSLSMPKTSNDPRTRLQNKPTASGATGRRACCFLAFLLSLPARLKQNPGVGRAKELEMNSPAPRSGLGGAGGGAFWSYYSQRLSATDILGLASMKNVAK
CDTWCELQDPVNHRVFEHKLRSEPSGRGHVCLGVTHRCPHPHNFPAHRVGSLCGRGHTLAYRAHRRADGLNLSPRRSLSRHYGG