CuGenDBv2

Gene ID	CSPI05G02430
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ribosomal_L7Ae domain-containing protein
Genome location	Chr5:3096189..3096500
RNA-Seq Expression	CSPI05G02430
Synteny	CSPI05G02430
Gene Ontology terms	GO:0005840 - ribosome (cellular component)
InterPro domains	IPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45 IPR029064 - 50S ribosomal protein L30e-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008466263.1 PREDICTED: uncharacterized protein LOC103503720 isoform X2 [Cucumis melo]

3.5e-29

94.44

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Query:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRT
        AILLTANCNPRWLTNHVP LAMSRKVPLILVKDKEGSLRLGELV+LKTAIAIGIK+NGSP+NQLIDEILQRT
Subjt:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRT

XP_008466271.1 PREDICTED: uncharacterized protein LOC103503720 isoform X3 [Cucumis melo]

3.5e-29

94.44

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Query:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRT
        AILLTANCNPRWLTNHVP LAMSRKVPLILVKDKEGSLRLGELV+LKTAIAIGIK+NGSP+NQLIDEILQRT
Subjt:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRT

XP_008466280.1 PREDICTED: ribonuclease P protein subunit p38 isoform X5 [Cucumis melo]

3.5e-29

94.44

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Query:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRT
        AILLTANCNPRWLTNHVP LAMSRKVPLILVKDKEGSLRLGELV+LKTAIAIGIK+NGSP+NQLIDEILQRT
Subjt:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRT

XP_011654557.1 ribonuclease P protein subunit p38 [Cucumis sativus]

2.9e-31

100

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Query:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRTT
        AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRTT
Subjt:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRTT

XP_038875290.1 ribonuclease P protein subunit p38 [Benincasa hispida]

1.6e-29

93.15

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Query:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRTT
        A+LLTANCNPRWLTNHVP+LAMSRKVPLILVKDKEGSLRLGELV+LKTAIAIGIKANGSP+NQLIDEILQR T
Subjt:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRTT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLN6 Ribosomal_L7Ae domain-containing protein

1.4e-31

100

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Query:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRTT
        AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRTT
Subjt:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRTT

A0A1S3CQU5 uncharacterized protein LOC103503720 isoform X2

1.7e-29

94.44

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Query:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRT
        AILLTANCNPRWLTNHVP LAMSRKVPLILVKDKEGSLRLGELV+LKTAIAIGIK+NGSP+NQLIDEILQRT
Subjt:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRT

A0A1S3CR39 ribonuclease P protein subunit p38 isoform X6

1.7e-29

94.44

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Query:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRT
        AILLTANCNPRWLTNHVP LAMSRKVPLILVKDKEGSLRLGELV+LKTAIAIGIK+NGSP+NQLIDEILQRT
Subjt:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRT

A0A1S3CS60 uncharacterized protein LOC103503720 isoform X1

1.7e-29

94.44

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Query:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRT
        AILLTANCNPRWLTNHVP LAMSRKVPLILVKDKEGSLRLGELV+LKTAIAIGIK+NGSP+NQLIDEILQRT
Subjt:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRT

A0A1S3CS63 uncharacterized protein LOC103503720 isoform X3

1.7e-29

94.44

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Query:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRT
        AILLTANCNPRWLTNHVP LAMSRKVPLILVKDKEGSLRLGELV+LKTAIAIGIK+NGSP+NQLIDEILQRT
Subjt:  AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G01790.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

1.9e-17

59.15

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Query:  ILLTANCNPRWLTNHVPTLAMSRKVPLILVKD-KEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQR
        ++L A+C PR LT H+P LA SR VP++ V+D K  SLRLGELV LKTA+AIGIKA G+ +N L+ +IL R
Subjt:  ILLTANCNPRWLTNHVPTLAMSRKVPLILVKD-KEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQR

Sequences

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CDS sequence

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GCTATACTGTTAACAGCCAATTGCAACCCCCGATGGCTTACAAACCATGTGCCAACCTTGGCCATGTCTAGGAAGGTACCATTGATACTCGTGAAAGATAAAGAAGGATC
ATTAAGGTTAGGTGAACTCGTTAGCCTTAAAACAGCAATTGCAATTGGAATAAAGGCGAATGGGAGCCCTATTAATCAACTCATTGATGAAATCCTTCAAAGAACAACA

mRNA sequence

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Protein sequence

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AILLTANCNPRWLTNHVPTLAMSRKVPLILVKDKEGSLRLGELVSLKTAIAIGIKANGSPINQLIDEILQRTT

CSPI05G02430 (gene) of Cucumber (PI 183967) v1 genome