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CSPI05G02440 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G02440
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionribonuclease P protein subunit p38 isoform X5
Genome locationChr5:3097187..3098715
RNA-Seq ExpressionCSPI05G02440
SyntenyCSPI05G02440
Gene Ontology termsGO:0043232 - intracellular non-membrane-bounded organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050271.1 ribonuclease P protein subunit p38 isoform X5 [Cucumis melo var. makuwa]1.4e-3986.73Show/hide
Query:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
        MGKNPKSS++PVA LQSKP +D SYEGERLDELLLSIQREIKT R LNAESLPEK WLKKQ+AIGVNEVTR LERMTPCGDSARLMNPNYK C VKLQ
Subjt:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
XP_008466254.1 PREDICTED: uncharacterized protein LOC103503720 isoform X1 [Cucumis melo]1.3e-4088.78Show/hide
Query:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
        MGKNPKSS++PVA LQSKP +D SYEGERLDELLLSIQREIKT R LNAESLPEKFWLKKQFAIGVNEVTR LERMTPCGDSARLMNPNYK C VKLQ
Subjt:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
XP_008466280.1 PREDICTED: ribonuclease P protein subunit p38 isoform X5 [Cucumis melo]1.3e-4088.78Show/hide
Query:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
        MGKNPKSS++PVA LQSKP +D SYEGERLDELLLSIQREIKT R LNAESLPEKFWLKKQFAIGVNEVTR LERMTPCGDSARLMNPNYK C VKLQ
Subjt:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
XP_011654557.1 ribonuclease P protein subunit p38 [Cucumis sativus]5.4e-4798.98Show/hide
Query:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
        MGKNPKSSS+PVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
Subjt:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
XP_016903668.1 PREDICTED: uncharacterized protein LOC103503720 isoform X4 [Cucumis melo]1.3e-4088.78Show/hide
Query:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
        MGKNPKSS++PVA LQSKP +D SYEGERLDELLLSIQREIKT R LNAESLPEKFWLKKQFAIGVNEVTR LERMTPCGDSARLMNPNYK C VKLQ
Subjt:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
TrEMBL top hitse value%identityAlignment
A0A0A0KJ77 Uncharacterized protein2.6e-4798.98Show/hide
Query:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
        MGKNPKSSS+PVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
Subjt:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
A0A1S3CQV2 ribonuclease P protein subunit p38 isoform X56.2e-4188.78Show/hide
Query:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
        MGKNPKSS++PVA LQSKP +D SYEGERLDELLLSIQREIKT R LNAESLPEKFWLKKQFAIGVNEVTR LERMTPCGDSARLMNPNYK C VKLQ
Subjt:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
A0A1S3CS60 uncharacterized protein LOC103503720 isoform X16.2e-4188.78Show/hide
Query:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
        MGKNPKSS++PVA LQSKP +D SYEGERLDELLLSIQREIKT R LNAESLPEKFWLKKQFAIGVNEVTR LERMTPCGDSARLMNPNYK C VKLQ
Subjt:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
A0A1S4E613 uncharacterized protein LOC103503720 isoform X46.2e-4188.78Show/hide
Query:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
        MGKNPKSS++PVA LQSKP +D SYEGERLDELLLSIQREIKT R LNAESLPEKFWLKKQFAIGVNEVTR LERMTPCGDSARLMNPNYK C VKLQ
Subjt:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
A0A5A7U9R8 Ribonuclease P protein subunit p38 isoform X56.9e-4086.73Show/hide
Query:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
        MGKNPKSS++PVA LQSKP +D SYEGERLDELLLSIQREIKT R LNAESLPEK WLKKQ+AIGVNEVTR LERMTPCGDSARLMNPNYK C VKLQ
Subjt:  MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G01790.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.4e-1647.96Show/hide
Query:  KNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQNC
        K  ++ SNPV        +   YEGERL  LL  IQR I+T++  N  SLPEK WLKKQ AIG+NEVTRVLERM P   S +  NP      + + +C
Subjt:  KNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQNC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAACCCTAAATCTTCTTCTAATCCTGTTGCACCCCTTCAATCCAAACCTAACCAAGACATTTCCTACGAAGGTGAACGTCTCGATGAGTTGCTACTGTCGAT
TCAGAGAGAGATAAAGACAACAAGAGATTTGAATGCGGAATCCTTGCCGGAAAAATTTTGGCTTAAGAAACAATTTGCAATTGGGGTTAATGAGGTTACTAGAGTTCTTG
AACGGATGACACCATGTGGGGATTCTGCTCGCTTAATGAACCCTAATTATAAGACGTGTACGGTCAAGCTTCAGAATTGCTGCGAGTTCCATCAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGAACCCTAAATCTTCTTCTAATCCTGTTGCACCCCTTCAATCCAAACCTAACCAAGACATTTCCTACGAAGGTGAACGTCTCGATGAGTTGCTACTGTCGAT
TCAGAGAGAGATAAAGACAACAAGAGATTTGAATGCGGAATCCTTGCCGGAAAAATTTTGGCTTAAGAAACAATTTGCAATTGGGGTTAATGAGGTTACTAGAGTTCTTG
AACGGATGACACCATGTGGGGATTCTGCTCGCTTAATGAACCCTAATTATAAGACGTGTACGGTCAAGCTTCAGAATTGCTGCGAGTTCCATCAG
Protein sequenceShow/hide protein sequence
MGKNPKSSSNPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKKQFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQNCCEFHQ