; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G02640 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G02640
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationChr5:3237459..3238173
RNA-Seq ExpressionCSPI05G02640
SyntenyCSPI05G02640
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]4.5e-3257.14Show/hide
Query:  MSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQ-SPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHN
        M+   SFI  I++RN  +       N LP+ I MQ+ SP  ++ +   +GK IL L+FQAVLALFI+S P S PPLL H FAAAV ISFAVSFA +FL N
Subjt:  MSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQ-SPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHN

Query:  SFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK
         FPR A LFEKIGAL +A GVC +AS LL+HQNFAWI W+A  FS++ F LSF+
Subjt:  SFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK

KAG6579132.1 hypothetical protein SDJN03_23580, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2654.62Show/hide
Query:  TPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFEKIGALFSAFGVCF
        TP +CLP++   +Q  +     S  +GK I+ L+ QA+LA+FISS P+S PPLL   F A +FISF +SFA +FL N+FP+ A LFEK+GALF+A GV  
Subjt:  TPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFEKIGALFSAFGVCF

Query:  IASFLLVHQNFAWICWVACTFSIIVFALSF
        IASFLL+H+N+AWI  +AC FS+IVF LS+
Subjt:  IASFLLVHQNFAWICWVACTFSIIVFALSF

KAG6579137.1 hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2550.3Show/hide
Query:  MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQ---KLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFI
        M ST    S+DM+ F      I   + GL     P+  +P        P    DSSQ    LGKI+  L+FQAVLALFI SPPTS PPLL+H FAAA+ I
Subjt:  MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQ---KLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFI

Query:  SFAVSFAALFLHNSFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK
        SFA+S AALFL  ++PR A    KIGAL +A G C I S LL HQ+F+WI W+AC F+++ F LSFK
Subjt:  SFAVSFAALFLHNSFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]1.0e-3154.55Show/hide
Query:  MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQ-QSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISF
        M S+S Q S+DM+   S I +I++RN  +       N LP+ I MQ  SP  ++ +   +G  IL L+FQAVLALFI+S  TS PPLL H F AAV ISF
Subjt:  MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQ-QSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISF

Query:  AVSFAALFLHNSFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK
        AVSF  +FL + FPR A LFEKIGAL +A GVC +AS LL+HQNFAWI W+AC FS++ F LSF+
Subjt:  AVSFAALFLHNSFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]1.9e-8399.39Show/hide
Query:  MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFA
        MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFA
Subjt:  MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFA

Query:  VSFAALFLHNSFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK
        VSFAALFLHNSFPRTAHLFEK+GALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK
Subjt:  VSFAALFLHNSFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein4.9e-3254.55Show/hide
Query:  MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQ-QSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISF
        M S+S Q S+DM+   S I +I++RN  +       N LP+ I MQ  SP  ++ +   +G  IL L+FQAVLALFI+S  TS PPLL H F AAV ISF
Subjt:  MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQ-QSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISF

Query:  AVSFAALFLHNSFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK
        AVSF  +FL + FPR A LFEKIGAL +A GVC +AS LL+HQNFAWI W+AC FS++ F LSF+
Subjt:  AVSFAALFLHNSFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK

A0A0A0KJP2 Uncharacterized protein9.3e-8499.39Show/hide
Query:  MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFA
        MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFA
Subjt:  MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFA

Query:  VSFAALFLHNSFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK
        VSFAALFLHNSFPRTAHLFEK+GALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK
Subjt:  VSFAALFLHNSFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK

A0A0A0KQ03 Uncharacterized protein3.2e-2341.67Show/hide
Query:  MAST-SHQTSLDMSAFSSFIRTISQRNYGLGCCC---TPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVF
        MA T  H+ SLDM+  +S I  ++ RN G+  C      S+CLP++I+MQ+       +S + G   LSL+FQA++ LF+S  P+S  PL    FAA + 
Subjt:  MAST-SHQTSLDMSAFSSFIRTISQRNYGLGCCC---TPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVF

Query:  ISFAVSFAALFLHNSFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK
         SF  S+  + L   FP+TA L +  GALF+A G C I S LL++ NF WICW+A    +  F +SFK
Subjt:  ISFAVSFAALFLHNSFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter2.2e-3257.14Show/hide
Query:  MSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQ-SPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHN
        M+   SFI  I++RN  +       N LP+ I MQ+ SP  ++ +   +GK IL L+FQAVLALFI+S P S PPLL H FAAAV ISFAVSFA +FL N
Subjt:  MSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQ-SPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHN

Query:  SFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK
         FPR A LFEKIGAL +A GVC +AS LL+HQNFAWI W+A  FS++ F LSF+
Subjt:  SFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK

A0A6J1CY58 uncharacterized protein LOC1110156581.3e-2460.63Show/hide
Query:  MASTSHQTSLDMSAFSSFIRTISQRNYGL------GCCCTPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAA
        MAST  QTS+DM+A SSFI  I++RN G+      G   TPS+CLP+ IRMQ+ P   A SSQ LGK IL L+FQAVLALFIS  P+SPP L    F AA
Subjt:  MASTSHQTSLDMSAFSSFIRTISQRNYGL------GCCCTPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAA

Query:  VFISFAVSFAALFLHNSFPRTAHLFEK
        V ISFAVSFA LFL  ++PR A LFEK
Subjt:  VFISFAVSFAALFLHNSFPRTAHLFEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAACTTCACACCAAACCTCTTTAGATATGAGTGCATTTTCTTCTTTTATCCGAACAATCAGCCAAAGAAACTATGGACTTGGCTGTTGCTGCACACCATCAAA
CTGCTTACCAGTTTTCATTAGAATGCAACAAAGCCCTCAAGCAACAGCCGATAGCTCTCAAAAACTTGGCAAGATAATTCTTAGCCTTAGTTTTCAAGCAGTTTTAGCCT
TGTTCATTAGCTCACCACCAACTTCCCCTCCTCCACTTTTGATACACTTTTTTGCTGCTGCTGTTTTCATTAGCTTTGCTGTTTCATTTGCTGCTCTTTTCCTTCATAAC
TCCTTCCCGAGAACCGCCCATTTATTCGAGAAGATTGGTGCGCTTTTTTCTGCATTTGGTGTGTGTTTCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGAT
TTGTTGGGTGGCATGTACCTTCTCCATCATTGTCTTTGCTTTATCATTTAAGTGA
mRNA sequenceShow/hide mRNA sequence
GGGAACCCCCTTGAGAGTGTATTGAAAAAACTATCATTTTCTTTTCTTTTTTTAGCTTTCTTTTCCAATGGCTTCAACTTCACACCAAACCTCTTTAGATATGAGTGCAT
TTTCTTCTTTTATCCGAACAATCAGCCAAAGAAACTATGGACTTGGCTGTTGCTGCACACCATCAAACTGCTTACCAGTTTTCATTAGAATGCAACAAAGCCCTCAAGCA
ACAGCCGATAGCTCTCAAAAACTTGGCAAGATAATTCTTAGCCTTAGTTTTCAAGCAGTTTTAGCCTTGTTCATTAGCTCACCACCAACTTCCCCTCCTCCACTTTTGAT
ACACTTTTTTGCTGCTGCTGTTTTCATTAGCTTTGCTGTTTCATTTGCTGCTCTTTTCCTTCATAACTCCTTCCCGAGAACCGCCCATTTATTCGAGAAGATTGGTGCGC
TTTTTTCTGCATTTGGTGTGTGTTTCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGATTTGTTGGGTGGCATGTACCTTCTCCATCATTGTCTTTGCTTTA
TCATTTAAGTGACATTTTTTAGACATAAAATGGCCATTTCTTTACCCATCCATTAGGCATTTTGTTTGACCTTCTTCCATGGCTCCATCAAGAATAATGAGCTCTCTCTG
TATGGATTTTTTTTCCCAGTTGAGATAATATTATTGAAGAAAAAGTTGTTCCCAC
Protein sequenceShow/hide protein sequence
MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHN
SFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK