; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G02740 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G02740
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionserine/arginine-rich splicing factor SR34A
Genome locationChr5:3308069..3318805
RNA-Seq ExpressionCSPI05G02740
SyntenyCSPI05G02740
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035774.1 Serine/arginine-rich splicing factor SR34A [Cucurbita argyrosperma subsp. argyrosperma]5.9e-12290.44Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGG-GG
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSSSD RS+YGG GG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGG-GG

Query:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRS
        GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKKY+GSPTR RSR+
Subjt:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRS

Query:  RSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGS
        RSRSRS SRSRSRSRSRS      ARRNRSKSAE +SVSRSVSRSRS SP+KSSR RSKSRSGSPR+AREGS
Subjt:  RSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGS

XP_011654574.2 serine/arginine-rich splicing factor SR34A [Cucumis sativus]2.3e-13489.77Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGG-
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGG-

Query:  ------------------------------GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKL
                                      GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKL
Subjt:  ------------------------------GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKL

Query:  DDTEFRNPWARAYIRVKKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQARE
        DDTEFRNPWARAYIRVKKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQARE
Subjt:  DDTEFRNPWARAYIRVKKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQARE

Query:  GSE
        GSE
Subjt:  GSE

XP_022137780.1 serine/arginine-rich splicing factor SR34A [Momordica charantia]2.1e-12789.82Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----

Query:  --------GGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKK
                GGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD+EGTFGIVDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKK
Subjt:  --------GGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKK

Query:  YDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGSE
        YDGSPTRSRSRSRSRSRSRSRS+SRSRS        ARRNRSKS E RSVSRSVSRSRSPSP+KSSRPRSKSRSGSPR+ REGSE
Subjt:  YDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGSE

XP_022996414.1 serine/arginine-rich splicing factor SR34A-like [Cucurbita maxima]5.4e-12391.18Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGG-GG
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSSSD RS+YGG GG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGG-GG

Query:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRS
        GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKKY+GSPTR RSR+
Subjt:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRS

Query:  RSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGS
        RSRSRSRSRSRSRSRSRSRS    A+RNRSKSAE +SVSRSVSRSRS SP+KSSR RSKSRSGSPR+AREGS
Subjt:  RSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGS

XP_038907230.1 serine/arginine-rich splicing factor SR34A [Benincasa hispida]1.3e-13295.02Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGG-
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGG-

Query:  ------GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPT
              GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA+RKLDDTEFRNPWARAYIRVKKYDGSPT
Subjt:  ------GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPT

Query:  RSRSRSRSRSRSRSRSRSRSRSRSRSRSRT--ARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGSE
        RSRSRSRSRSRSRSRSRSRSRSRSRSRSR+  ARRNRSKSAE RSVSRSVSRSRSPSP+KSSRPRSKSRSGSPRQAREGSE
Subjt:  RSRSRSRSRSRSRSRSRSRSRSRSRSRSRT--ARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGSE

TrEMBL top hitse value%identityAlignment
A0A0A0KLR9 Uncharacterized protein3.1e-13292.36Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----

Query:  -----------GGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
                   GGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
Subjt:  -----------GGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGSE
        VKKYDGSPT      RSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGSE
Subjt:  VKKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGSE

A0A6J1C7M8 serine/arginine-rich splicing factor SR34A1.0e-12789.82Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----

Query:  --------GGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKK
                GGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD+EGTFGIVDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKK
Subjt:  --------GGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKK

Query:  YDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGSE
        YDGSPTRSRSRSRSRSRSRSRS+SRSRS        ARRNRSKS E RSVSRSVSRSRSPSP+KSSRPRSKSRSGSPR+ REGSE
Subjt:  YDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGSE

A0A6J1H330 serine/arginine-rich splicing factor SR34A-like7.1e-12188.97Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGG-GG
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSSSD RS+YGG GG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGG-GG

Query:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRS
        GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKKY+GSPTR RSR+
Subjt:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRS

Query:  RSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGS
        RSRSRSRSRSRSRS           RRNRSKSAE +SVSRSVSRSRS SP+KSSR RSKSRSGSPR+AREGS
Subjt:  RSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGS

A0A6J1IHC8 serine/arginine-rich splicing factor SR34A-like isoform X41.5e-11886.43Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----

Query:  GGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRS
        GGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNYDDMKYAIRKLDDTEFRNPWAR YIRVKKYDGSPTRS
Subjt:  GGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRS

Query:  RSRSRS-----------------------RSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKS
        RSRSRS                       RSRSR+RS+SRSRSRSRSRSR+AR NRSKSAE RSVSRSVSRSRSPSP+KS
Subjt:  RSRSRS-----------------------RSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKS

A0A6J1K1U7 serine/arginine-rich splicing factor SR34A-like2.6e-12391.18Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGG-GG
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSSSD RS+YGG GG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGG-GG

Query:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRS
        GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKKY+GSPTR RSR+
Subjt:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRS

Query:  RSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGS
        RSRSRSRSRSRSRSRSRSRS    A+RNRSKSAE +SVSRSVSRSRS SP+KSSR RSKSRSGSPR+AREGS
Subjt:  RSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGS

SwissProt top hitse value%identityAlignment
A2RVS6 Serine/arginine-rich splicing factor SR34A4.8e-10672.91Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRR-------S
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR       S
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRR-------S

Query:  SYGGGGGGG---RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG
         YGGGGGGG   RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRVKKY+ 
Subjt:  SYGGGGGGG---RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG

Query:  SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRS-----KSAERRSVSRSVSRSRSPSPIKS-------------SRPRSKSRSGSPRQAREGS
        S +RSRS SRSRSRSRSRSRSR R RS SRSR+  R++S       + RRS+SRS+S+SRSPSP K              SR RS+S S SP + REGS
Subjt:  SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRS-----KSAERRSVSRSVSRSRSPSPIKS-------------SRPRSKSRSGSPRQAREGS

F4JHI7 Serine/arginine-rich splicing factor SR34B3.0e-7664.96Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----
        MSSR SRTIYVGNLP DI+E E+EDLF KYG ++ I+LKIPPRPP Y FVEFE  RDA+DAI  RDGY+FDG  LRVELAHGGR  SS D R SY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----

Query:  ---GGGGGGGR-FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGS
           GGG GGGR  G S+RSEYRV+V GLPSSASWQDLKDHMRK G+VCF++V RD  GT GIVDYT+Y+DMKYA   LDDTEFRN ++  Y+RV++YD  
Subjt:  ---GGGGGGGR-FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGS

Query:  PTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPR
         +R  SRS SR RS S+SRSR RS SRSRSR+  R++S+S + +S+ RS ++S S SP   SR RSKSRS SPR
Subjt:  PTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPR

O22315 Serine/arginine-rich-splicing factor SR346.9e-8162.72Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF+  RDAEDAI  RDGY+FDG RLRVELAHGGR  S   R S  GGG G
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGR-------FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG---
        GGR        G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+RV++YD    
Subjt:  GGR-------FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG---

Query:  --SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSV---SRSRSPSPIKSSRPRSKSRSGSPRQAREGSE
          SP+R RS S+SRSRSR RS SRSRSRSRSRSR+ +   S+ +  +S SRS    S+SRSPSP    R RS+SRS  P   +EGS+
Subjt:  --SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSV---SRSRSPSPIKSSRPRSKSRSGSPRQAREGSE

Q7SXP4 Serine/arginine-rich splicing factor 1A7.2e-5458.3Show/hide
Query:  IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGGG-------
        IYVGNLP DI+  ++ED+FYKYG I DI+LK     P + FVEFE  RDAEDA+ ARDGY++DG RLRVE    GRG          GGGGGG       
Subjt:  IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGGG-------

Query:  --GRFG-VSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFR-NPWARAYIRVKKYDGSPTRSRS
          GR+G  S+RSEYRVIV GLP S SWQDLKDHMR+AGDVC+A+V RD  GT G+V++   +DM YA+RKLD+T+FR +    AYIRV K DG   RS S
Subjt:  --GRFG-VSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFR-NPWARAYIRVKKYDGSPTRSRS

Query:  RSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRS
          RSRSRSRSRSRSRSRS +RSRS + RR+R         SRS SRS
Subjt:  RSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRS

Q9XFR5 Serine/arginine-rich splicing factor SR302.1e-6962.83Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGR--GPSSSDRRSSYGGG
        MSSR++RTIYVGNLP DI++ E+EDLFYKYG I+DI+LKIPPRPP Y FVEFE  RDA+DAI  RDGY+FDGCRLRVE+AHGGR   PS     SSY   
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGR--GPSSSDRRSSYGGG

Query:  GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSR
                S+RS+YRV+V GLP SASWQDLKDHMRKAGDVCF+EV  D +G  G+VDY+NYDDMKYAIRKLD TEFRN ++ AYIRV++Y+   +RS SR
Subjt:  GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSR

Query:  SRSRSRS-RSRSRSRSRSRS-RSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKS-SRPRSKSRSGSP
        S   S+S RSRSRSR  S S  S+SR+    RS S   R +SRS S   S S  +S S+ RS+SRS SP
Subjt:  SRSRSRS-RSRSRSRSRSRS-RSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKS-SRPRSKSRSGSP

Arabidopsis top hitse value%identityAlignment
AT1G02840.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.9e-8262.72Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF+  RDAEDAI  RDGY+FDG RLRVELAHGGR  S   R S  GGG G
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGR-------FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG---
        GGR        G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+RV++YD    
Subjt:  GGR-------FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG---

Query:  --SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSV---SRSRSPSPIKSSRPRSKSRSGSPRQAREGSE
          SP+R RS S+SRSRSR RS SRSRSRSRSRSR+ +   S+ +  +S SRS    S+SRSPSP    R RS+SRS  P   +EGS+
Subjt:  --SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSV---SRSRSPSPIKSSRPRSKSRSGSPRQAREGSE

AT1G02840.3 RNA-binding (RRM/RBD/RNP motifs) family protein4.9e-8262.72Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF+  RDAEDAI  RDGY+FDG RLRVELAHGGR  S   R S  GGG G
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGR-------FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG---
        GGR        G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+RV++YD    
Subjt:  GGR-------FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG---

Query:  --SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSV---SRSRSPSPIKSSRPRSKSRSGSPRQAREGSE
          SP+R RS S+SRSRSR RS SRSRSRSRSRSR+ +   S+ +  +S SRS    S+SRSPSP    R RS+SRS  P   +EGS+
Subjt:  --SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSV---SRSRSPSPIKSSRPRSKSRSGSPRQAREGSE

AT3G49430.1 SER/ARG-rich protein 34A3.4e-10772.91Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRR-------S
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR       S
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRR-------S

Query:  SYGGGGGGG---RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG
         YGGGGGGG   RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRVKKY+ 
Subjt:  SYGGGGGGG---RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG

Query:  SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRS-----KSAERRSVSRSVSRSRSPSPIKS-------------SRPRSKSRSGSPRQAREGS
        S +RSRS SRSRSRSRSRSRSR R RS SRSR+  R++S       + RRS+SRS+S+SRSPSP K              SR RS+S S SP + REGS
Subjt:  SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRS-----KSAERRSVSRSVSRSRSPSPIKS-------------SRPRSKSRSGSPRQAREGS

AT3G49430.2 SER/ARG-rich protein 34A6.4e-10676.67Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRR-------S
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR       S
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRR-------S

Query:  SYGGGGGGG---RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG
         YGGGGGGG   RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRVKKY+ 
Subjt:  SYGGGGGGG---RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG

Query:  SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRS-----KSAERRSVSRSVSRSRSPSPIKSSRP
        S +RSRS SRSRSRSRSRSRSR R RS SRSR+  R++S       + RRS+SRS+S+SRSPSP K   P
Subjt:  SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRS-----KSAERRSVSRSVSRSRSPSPIKSSRP

AT3G49430.3 SER/ARG-rich protein 34A3.4e-10772.91Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRR-------S
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR       S
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRR-------S

Query:  SYGGGGGGG---RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG
         YGGGGGGG   RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRVKKY+ 
Subjt:  SYGGGGGGG---RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG

Query:  SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRS-----KSAERRSVSRSVSRSRSPSPIKS-------------SRPRSKSRSGSPRQAREGS
        S +RSRS SRSRSRSRSRSRSR R RS SRSR+  R++S       + RRS+SRS+S+SRSPSP K              SR RS+S S SP + REGS
Subjt:  SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRS-----KSAERRSVSRSVSRSRSPSPIKS-------------SRPRSKSRSGSPRQAREGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTCGTTTTTCTCGCACAATATATGTTGGAAACTTGCCCTCAGACATAAAAGAGTATGAAATTGAAGATTTGTTCTACAAGTATGGCCGAATTTTGGATATTGA
ATTGAAGATTCCACCACGCCCTCCATGTTATTGTTTTGTGGAGTTTGAGAGTGTTAGGGATGCAGAAGATGCAATCAGAGCTCGTGATGGATATAATTTTGATGGTTGTC
GTTTAAGGGTTGAGCTTGCACATGGTGGTAGGGGCCCTTCATCTAGTGATCGTCGTAGTAGTTATGGTGGTGGTGGTGGGGGAGGACGTTTTGGTGTTTCAAAACGATCA
GAATATCGAGTTATTGTACGTGGTCTTCCGTCTTCTGCTTCTTGGCAGGATTTGAAGGATCATATGCGCAAGGCAGGGGATGTGTGTTTTGCTGAAGTTTCACGTGATAG
CGAAGGGACGTTTGGGATCGTTGATTATACTAACTACGACGACATGAAATATGCTATACGAAAACTTGATGATACTGAATTCAGAAATCCTTGGGCGAGAGCATACATTC
GGGTGAAGAAGTATGATGGAAGTCCCACTAGGAGCAGGAGCAGGAGCAGGAGTAGAAGCCGTAGCCGTAGCCGTAGCCGTAGCCGTAGCCGAAGCCGAAGCCGAAGCCGA
AGCCGGACTGCTAGACGAAATAGGAGCAAATCAGCAGAACGACGATCTGTTTCTAGATCAGTTTCAAGATCAAGATCTCCATCTCCTATTAAATCTTCAAGGCCACGGTC
AAAATCAAGATCTGGATCACCACGTCAGGCACGAGAAGGAAGCGAGTGA
mRNA sequenceShow/hide mRNA sequence
CTGTGGTATATTATCTTCTGTTACGACCTAACCCTAAGCCCTTCGTCATCCCGTCCGGTCGCTGCGAAGAAAGCAGAGAAGGATCCCCAAGTCATCAACTCCTCTTTCAC
CCCTTGCTGAGCCGCAGAGCCGTCATTTTCGCTTTTCACTTTCTCGTGTGATATCAAAATTAGCTTCATATCCCTGCTGAGGAATTTCATTACTCAGACTGCTCCGTTTT
CGAGTGTTTCACGGTGGGTCGGACGTTGGAAATCTTGGATTTTCATTTTGCTCTGTCAGCTCCCTCGTTTTCTGGAATAGGGTGCGGTATTTAGTTGGTTTAAGGAATAA
TATTCAAACTTCCTCGGAGTAATTTGTTGCCTTGAAGATGAGTAGTCGTTTTTCTCGCACAATATATGTTGGAAACTTGCCCTCAGACATAAAAGAGTATGAAATTGAAG
ATTTGTTCTACAAGTATGGCCGAATTTTGGATATTGAATTGAAGATTCCACCACGCCCTCCATGTTATTGTTTTGTGGAGTTTGAGAGTGTTAGGGATGCAGAAGATGCA
ATCAGAGCTCGTGATGGATATAATTTTGATGGTTGTCGTTTAAGGGTTGAGCTTGCACATGGTGGTAGGGGCCCTTCATCTAGTGATCGTCGTAGTAGTTATGGTGGTGG
TGGTGGGGGAGGACGTTTTGGTGTTTCAAAACGATCAGAATATCGAGTTATTGTACGTGGTCTTCCGTCTTCTGCTTCTTGGCAGGATTTGAAGGATCATATGCGCAAGG
CAGGGGATGTGTGTTTTGCTGAAGTTTCACGTGATAGCGAAGGGACGTTTGGGATCGTTGATTATACTAACTACGACGACATGAAATATGCTATACGAAAACTTGATGAT
ACTGAATTCAGAAATCCTTGGGCGAGAGCATACATTCGGGTGAAGAAGTATGATGGAAGTCCCACTAGGAGCAGGAGCAGGAGCAGGAGTAGAAGCCGTAGCCGTAGCCG
TAGCCGTAGCCGTAGCCGAAGCCGAAGCCGAAGCCGAAGCCGGACTGCTAGACGAAATAGGAGCAAATCAGCAGAACGACGATCTGTTTCTAGATCAGTTTCAAGATCAA
GATCTCCATCTCCTATTAAATCTTCAAGGCCACGGTCAAAATCAAGATCTGGATCACCACGTCAGGCACGAGAAGGAAGCGAGTGATGCAAAGCTATGATTATATGTATG
GTTGTTATAATATTCAGGATGTGACATTGCCTTGGGATTCGTTTTAGTGTAGGACCTATGCAGTGCAGACTCCATATGAGGGGTTGAGTTGGAAAGTGGCATGAGTTGTA
TGGATATTCTTTTGAATCCTTCCTACATCACTTTGTTAGGAGAGATTTTTAGGTATCTGCATTCTCAAGATACTTGCACACTGGTTTCCCTGCTGATAACTATTCAGATT
TTGTTTGAAAGTTGAAAATGAAATTGTTAGTAAATGGGATTTTAGACGTTGTAATTATTAATTTTAGACGTTGG
Protein sequenceShow/hide protein sequence
MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGGGGRFGVSKRS
EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSR
SRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQAREGSE