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CSPI05G03360 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G03360
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiontranscription factor TRY
Genome locationChr5:3626802..3627844
RNA-Seq ExpressionCSPI05G03360
SyntenyCSPI05G03360
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016898876.1 PREDICTED: transcription factor TRY [Cucumis melo]1.1e-3997.56Show/hide
Query:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        MDNHRHQK AKISPL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

XP_022922339.1 transcription factor TRY-like [Cucurbita moschata]1.5e-3692.68Show/hide
Query:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        M NHR QK AK+ PLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFG RRRG
Subjt:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

XP_022973073.1 transcription factor TRY-like [Cucurbita maxima]1.4e-3793.9Show/hide
Query:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        M+NHR QK AK+ PLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

XP_031742154.1 transcription factor TRY [Cucumis sativus]6.0e-41100Show/hide
Query:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

XP_038875738.1 transcription factor TRY [Benincasa hispida]1.6e-3896.34Show/hide
Query:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        MDNHRHQK AKI+ LESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

TrEMBL top hitse value%identityAlignment
A0A1S4DSB1 transcription factor TRY5.4e-4097.56Show/hide
Query:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        MDNHRHQK AKISPL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

A0A5D3C2B2 Transcription factor TRY5.4e-4097.56Show/hide
Query:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        MDNHRHQK AKISPL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

A0A6J1E339 transcription factor TRY-like7.3e-3792.68Show/hide
Query:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        M NHR QK AK+ PLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFG RRRG
Subjt:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

A0A6J1IC17 transcription factor TRY-like6.6e-3893.9Show/hide
Query:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        M+NHR QK AK+ PLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

I6NF75 R3 MYB transcription factor2.9e-41100Show/hide
Query:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
        MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
Subjt:  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

SwissProt top hitse value%identityAlignment
B3H4X8 MYB-like transcription factor TCL21.8e-1954.55Show/hide
Query:  RHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        R +K +K +  ++ EV+S +W+FI MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++IERYWIM + +    +RR
Subjt:  RHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR

O22059 Transcription factor CPC9.3e-2159.74Show/hide
Query:  RHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        R ++ +K     SEEVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEIERYW+M H   F  RRR
Subjt:  RHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR

Q84RD1 MYB-like transcription factor ETC24.6e-2063.77Show/hide
Query:  SPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        S  +SEEVSS  W+FI+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM + + F  +RR
Subjt:  SPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR

Q8GV05 Transcription factor TRY1.3e-2566.25Show/hide
Query:  DNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        D  R +K  KI+  +SEEVSS  W+FI MT QEEDLI RM++L+GDRWDLIAGR+PGR+PEEIERYWIM + EGF  +RR
Subjt:  DNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR

Q9M157 MYB-like transcription factor ETC32.3e-1958.9Show/hide
Query:  MDNHRHQKPAKISPL---ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM
        MDNHR  K  K + +    SEEVSS  W+ + M+ +EEDL+ RMHKL+GDRW+LIAGRIPGR   EIER+W+M
Subjt:  MDNHRHQKPAKISPL---ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM

Arabidopsis top hitse value%identityAlignment
AT2G30420.1 Homeodomain-like superfamily protein3.3e-2163.77Show/hide
Query:  SPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        S  +SEEVSS  W+FI+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM + + F  +RR
Subjt:  SPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR

AT2G30424.1 Homeodomain-like superfamily protein1.2e-2054.55Show/hide
Query:  RHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        R +K +K +  ++ EV+S +W+FI MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++IERYWIM + +    +RR
Subjt:  RHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR

AT2G46410.1 Homeodomain-like superfamily protein6.6e-2259.74Show/hide
Query:  RHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        R ++ +K     SEEVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEIERYW+M H   F  RRR
Subjt:  RHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR

AT4G01060.3 CAPRICE-like MYB31.6e-2058.9Show/hide
Query:  MDNHRHQKPAKISPL---ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM
        MDNHR  K  K + +    SEEVSS  W+ + M+ +EEDL+ RMHKL+GDRW+LIAGRIPGR   EIER+W+M
Subjt:  MDNHRHQKPAKISPL---ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM

AT5G53200.1 Homeodomain-like superfamily protein8.9e-2766.25Show/hide
Query:  DNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR
        D  R +K  KI+  +SEEVSS  W+FI MT QEEDLI RM++L+GDRWDLIAGR+PGR+PEEIERYWIM + EGF  +RR
Subjt:  DNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAATCATCGTCACCAGAAACCGGCCAAAATCTCTCCACTAGAATCCGAAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCT
TATCCATAGAATGCACAAGCTGATTGGAGATAGGTGGGATCTCATAGCAGGCAGAATTCCGGGGCGAAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTG
AAGGGTTTGGAAAAAGAAGAAGAGGATGA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTCTCTCTCTTTCTCTCTCAAAGATTTCAATATTTTAATCTTGTCTTTTATCCCTGTAAGTTGTCAACTACAAGTCTACCAACCCAACAAGTCAACCAACAAA
CTTACTTCCTAAAGTTTGGTGGGAAGAAGAAACTACAGGCATGCACATAAACTTAAATTTGCCCCTGGATGTTTCAAATCTGTCTATCACAGTTTTTCCTAAAATTCTTT
CATTCCCAGTTCTTTAGCTTCTTGTTTTTGTGCTGCCTCTAATCTTTGAAGAAACATGGACAATCATCGTCACCAGAAACCGGCCAAAATCTCTCCACTAGAATCCGAAG
AAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCACAAGCTGATTGGAGATAGGTGGGATCTCATAGCAGGCAGA
ATTCCGGGGCGAAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGGAAAAAGAAGAAGAGGATGAGAGAGACAGAGAGATACAGGCAATGA
GGGTTCAGTCAATAAGTCCTCAAAGACTTCTGATGGGTTCTCTACTTCATCGTTTGTGGTCTCCCTGAAGATAACCATCTCCCTAATAGCTTTAGTGTATTACAAGTACC
CTTTCTAAGAACACATGGTATGGAACAGAGCTATCTTTTATCAATCAAATAACACAGTATAATTTATGATTCCAAATCAAAAACTAAAGCAAAGAGCAAAG
Protein sequenceShow/hide protein sequence
MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG