; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G03600 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G03600
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA-binding protein pno1-like
Genome locationChr5:3752406..3754509
RNA-Seq ExpressionCSPI05G03600
SyntenyCSPI05G03600
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR036612 - K Homology domain, type 1 superfamily
IPR039912 - Pre-rRNA-processing protein PNO1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042585.1 RNA-binding protein pno1-like [Cucumis melo var. makuwa]3.6e-11797.77Show/hide
Query:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS
        MQSTEVPVSMEVETVSSKTVTE+GT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRA+TPD+S
Subjt:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_004145908.1 RNA-binding protein pno1 [Cucumis sativus]1.5e-118100Show/hide
Query:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS
        MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS
Subjt:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_008437547.1 PREDICTED: RNA-binding protein pno1-like [Cucumis melo]3.6e-11797.77Show/hide
Query:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS
        MQSTEVPVSMEVETVSSKTVTE+GT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRA+TPD+S
Subjt:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_022157181.1 RNA-binding protein pno1-like [Momordica charantia]4.9e-11494.2Show/hide
Query:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS
        MQSTE P SMEVE +S+K +TE+GTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTP+Y+QMKIDIRMNLKARKVELKTR DTPD+S
Subjt:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_038874451.1 RNA-binding protein pno1-like [Benincasa hispida]1.4e-11696.88Show/hide
Query:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS
        MQSTEVP+SMEVE VSSKT TE+GTLPPKP+FDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKID+RMNLKARKVELKTRADTPD+S
Subjt:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

TrEMBL top hitse value%identityAlignment
A0A0A0KQC5 KH domain-containing protein7.1e-119100Show/hide
Query:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS
        MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS
Subjt:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A1S3AUA6 RNA-binding protein pno1-like1.8e-11797.77Show/hide
Query:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS
        MQSTEVPVSMEVETVSSKTVTE+GT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRA+TPD+S
Subjt:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A5D3C450 RNA-binding protein pno1-like1.8e-11797.77Show/hide
Query:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS
        MQSTEVPVSMEVETVSSKTVTE+GT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRA+TPD+S
Subjt:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1DX80 RNA-binding protein pno1-like2.4e-11494.2Show/hide
Query:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS
        MQSTE P SMEVE +S+K +TE+GTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTP+Y+QMKIDIRMNLKARKVELKTR DTPD+S
Subjt:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1K1S8 RNA-binding protein pno1-like3.1e-11494.64Show/hide
Query:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS
        MQSTEVP+SMEVE V SK++TE+G LPPKP F+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRADTPD+S
Subjt:  MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

SwissProt top hitse value%identityAlignment
A7RP64 RNA-binding protein pno12.6e-6556.54Show/hide
Query:  EVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFVH
        E++TV S+          +P F P+K  ++  G+ + RK+ VP HRY+PLK+ WM+I+TP+ + +K+ IR NL +R VE++   +T D+  +QK ADFV 
Subjt:  EVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFVH

Query:  AFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVY
        AF+LGF+V DA+AL+R+D+L++ESFEI DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+A+TKIHILGSF NIKIAR ++C+LILGSP  KVY
Subjt:  AFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVY

Query:  SKLRAVTARLAERF
          +RAV +R AERF
Subjt:  SKLRAVTARLAERF

Q29IG6 RNA-binding protein pno14.4e-6566.29Show/hide
Query:  QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG
        + RKVSVPPHRYS LK+ WM+I+TP+ + MK+ IR N+KAR+VEL+   +TPD++NLQK ADFV AF+ GF+V DA+ALLR+++L+VE+FEIKDVKTLRG
Subjt:  QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG

Query:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        +H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LR+V +RL+ER
Subjt:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Q5F414 RNA-binding protein PNO18.3e-6457.62Show/hide
Query:  SSKTVTEIGTLPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFVHAFML
        ++++    G  P K P F PL    +  G+ + RKV VP +RY+PLK+ WM+I+TPI + +++ IR NLK R VE+KT ++T D+S L K ADFV AF+L
Subjt:  SSKTVTEIGTLPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFVHAFML

Query:  GFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLR
        GF V DA+AL+R+D+L++ESFE+ DVK L+G+HLSRAIGR++GK GKTKF IEN T+TRIV+AD+KIHILGSF NIK+AR ++C+LILGSP  KVY  +R
Subjt:  GFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLR

Query:  AVTARLAERF
        AV +R AERF
Subjt:  AVTARLAERF

Q8AVH4 RNA-binding protein PNO18.3e-6457.35Show/hide
Query:  EIGTLPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFVHAFMLGFDVID
        ++G  P K P F P+   ++   + + RK+ VP HRY+PLK+ WM+I+TPI + +++ +R NLK+R VE+KT  +T DV  L K ADFV AF+LGF V D
Subjt:  EIGTLPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFVHAFMLGFDVID

Query:  AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARL
        A+AL+R+D+L++ESFE+ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+AD+KIHI+GSF NIK+AR ++C+LILGSP  KVY  +RAV +R 
Subjt:  AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARL

Query:  AERF
        A+RF
Subjt:  AERF

Q9VR89 RNA-binding protein pno14.0e-6664.71Show/hide
Query:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFE
        P +    R + RKVSVPPHRYS LK+ WM+I+TP+ + MK+ IR N+KAR+VEL+   +TPD++NLQ+ ADFV AF+ GF+V DA+ALLR+++L+VESFE
Subjt:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFE

Query:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        IKDVKTLRG+H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LRAV +RL+ER
Subjt:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Arabidopsis top hitse value%identityAlignment
AT3G13230.1 RNA-binding KH domain-containing protein7.6e-9782.16Show/hide
Query:  MEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFV
        MEVET +  TV     LPPKP F PLK HEM+DG+VQFRK++VPP+RYSPLKKAW++IYTPIYDQMK+DIRMNLKARKVELKTRADTPD+SNLQK ADFV
Subjt:  MEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFV

Query:  HAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKV
        HAFMLGFD+ DAI+LLR+DELYVESFEIKDVKTL+GEHLSRAIGRLSGK GKTKFAIEN+TKTRIVIADT+IHILG+F+NIK+AR SLCSLI+GSPAGKV
Subjt:  HAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKV

Query:  YSKLRAVTARLAE
        YSKLR+V+ARL E
Subjt:  YSKLRAVTARLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTACTGAAGTTCCCGTTTCCATGGAAGTGGAAACAGTTTCAAGCAAAACAGTAACTGAAATTGGGACCTTGCCGCCAAAACCGCAGTTTGATCCTCTAAAGCC
TCATGAGATGAACGATGGCCGAGTTCAGTTCCGAAAGGTATCTGTTCCTCCACATCGATATTCTCCTCTCAAGAAAGCATGGATGGAAATCTACACCCCAATATATGATC
AGATGAAAATTGACATCCGTATGAACCTCAAGGCTCGTAAAGTTGAACTGAAAACAAGAGCAGACACACCCGACGTTAGTAACTTGCAAAAGTGTGCAGATTTTGTTCAT
GCTTTCATGCTTGGTTTTGATGTAATCGATGCCATTGCACTCTTACGAGTGGATGAGCTCTATGTAGAATCTTTTGAGATCAAAGATGTTAAGACGCTTCGAGGTGAGCA
CTTGTCCCGTGCCATTGGCAGATTGTCTGGTAAAGCTGGTAAAACAAAGTTTGCCATTGAAAACGCTACAAAGACAAGGATAGTTATTGCAGACACCAAGATTCACATAT
TAGGATCCTTTGCCAACATAAAAATTGCTAGAGATTCTCTTTGCAGCCTCATTTTAGGTTCTCCGGCTGGAAAAGTTTATTCAAAACTTAGAGCAGTTACAGCCAGATTG
GCAGAAAGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
CACAATCAGAGTTTGCCCTAATTTATGACTTTGATTTCATTCTTCTCCTTCCTCTTCTCTTTGAGATTCAATCTTCACTTCACCTCCTCGGCTCTGATTCATACTACCTC
CACTGCTCCGCCAGCTACTCTCTGCGACTAAATTTTCCGTCCTCACTGAGCGGTGGCTCTCCCATTCAAGCTTTAGCCGATACCTTACTGTGACGCTCCCGTTCTTCTCT
CAACTTCTCATCCGCCCTCGTCTCTCACCGTCGCAGGGTGGAACTCAGCAAAATTTCATAATGCAGTCTACTGAAGTTCCCGTTTCCATGGAAGTGGAAACAGTTTCAAG
CAAAACAGTAACTGAAATTGGGACCTTGCCGCCAAAACCGCAGTTTGATCCTCTAAAGCCTCATGAGATGAACGATGGCCGAGTTCAGTTCCGAAAGGTATCTGTTCCTC
CACATCGATATTCTCCTCTCAAGAAAGCATGGATGGAAATCTACACCCCAATATATGATCAGATGAAAATTGACATCCGTATGAACCTCAAGGCTCGTAAAGTTGAACTG
AAAACAAGAGCAGACACACCCGACGTTAGTAACTTGCAAAAGTGTGCAGATTTTGTTCATGCTTTCATGCTTGGTTTTGATGTAATCGATGCCATTGCACTCTTACGAGT
GGATGAGCTCTATGTAGAATCTTTTGAGATCAAAGATGTTAAGACGCTTCGAGGTGAGCACTTGTCCCGTGCCATTGGCAGATTGTCTGGTAAAGCTGGTAAAACAAAGT
TTGCCATTGAAAACGCTACAAAGACAAGGATAGTTATTGCAGACACCAAGATTCACATATTAGGATCCTTTGCCAACATAAAAATTGCTAGAGATTCTCTTTGCAGCCTC
ATTTTAGGTTCTCCGGCTGGAAAAGTTTATTCAAAACTTAGAGCAGTTACAGCCAGATTGGCAGAAAGGTTTTGATCTTTTATGATTTTTGCATACCTAGTTATTTGAGG
AATAGTGTAACTTTATTTAAATGCTTATGCATTAAAGTTTTGTCCTAGATACCAATTATTAATCAATACACATCGTCACTAAATGAGTATAAGGTGATTGGTATTTAGAT
TGGTGTGCTGATTGAAGTTACTTGATATCTGTTCTGTTTAAAGCCGGTTAAATAGTGTGTTTATCATTTTGCTTCAATTTATTAGCTTTGCTCAATATCAAGTAGGTTTC
CATTTAGATTTTTCTTTAGGTGGGCTTTGTTGCTTGAAATTCAAAACTGCACATGCATGGGTAATACCTCGG
Protein sequenceShow/hide protein sequence
MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFVH
AFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARL
AERF