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CSPI05G03710 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G03710
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr5:3809553..3810057
RNA-Seq ExpressionCSPI05G03710
SyntenyCSPI05G03710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042594.1 hypothetical protein E6C27_scaffold44G00900 [Cucumis melo var. makuwa]1.3e-2477.11Show/hide
Query:  RSHGQSQEVKAATLLHKAMEYDTNSRWRFQTGAINIDYNFFVTLTPVIYEHNAFAPYLSKVVIAATLLHKATEYETTHNGERP
        RSHGQSQEVKAATLLHKAMEYDTN+R RFQ GAI+IDYN+FVTLTP            SKV IAATLLHKATEYETTHNGE P
Subjt:  RSHGQSQEVKAATLLHKAMEYDTNSRWRFQTGAINIDYNFFVTLTPVIYEHNAFAPYLSKVVIAATLLHKATEYETTHNGERP

KAE8647814.1 hypothetical protein Csa_023512, partial [Cucumis sativus]2.8e-4890.99Show/hide
Query:  KRSLRLSDLTARLEKPFSPERWYLVNRYHHQQITKTLRIKCRSHGQSQEVKAATLLHKAMEYDTNSRWRFQTGAINIDYNFFVTLTPVIYEHNAFAPYLS
        KRSLRLSDLTARLEKPFSPERWY VNRYHHQQITKTLRIKCRSHGQSQEVKAATLLHKAMEYDTNSRWRFQTGAINID NFFVTLTPVIYEHNAFAPYL 
Subjt:  KRSLRLSDLTARLEKPFSPERWYLVNRYHHQQITKTLRIKCRSHGQSQEVKAATLLHKAMEYDTNSRWRFQTGAINIDYNFFVTLTPVIYEHNAFAPYLS

Query:  KVVIAATLLHK
        K  I     HK
Subjt:  KVVIAATLLHK

KGN49050.1 hypothetical protein Csa_004114 [Cucumis sativus]1.0e-1855.45Show/hide
Query:  YLVNRYHHQQITKTLRIKC-RSHGQSQEVKAATLLHKAMEYDTNSRWRFQTGAINIDYNFFVTLTPVIYEHNAFAPYLSKVVIAATLLHKATEYETTHNG
        +L   + +    +++  +C +S   SQEVKAATLLHKAMEYDTNSRWRFQTGAI+ID N FVTLTP IYEHN FAPYL K  I     HK  +    +  
Subjt:  YLVNRYHHQQITKTLRIKC-RSHGQSQEVKAATLLHKAMEYDTNSRWRFQTGAINIDYNFFVTLTPVIYEHNAFAPYLSKVVIAATLLHKATEYETTHNG

Query:  E
        E
Subjt:  E

TKY50335.1 hypothetical protein E2542_SST27795 [Spatholobus suberectus]7.1e-0445Show/hide
Query:  IKCRSHGQSQEVKAATLLHKAMEYDTNSRWRFQTGAINIDYNFFVTLTPVIYEHNAFA-PYLSKVVIAATLLHKATEYET
        ++C SHGQSQ+VKAAT LHKAMEY+T                    + PV       A  Y S++V+A T LHKA EYET
Subjt:  IKCRSHGQSQEVKAATLLHKAMEYDTNSRWRFQTGAINIDYNFFVTLTPVIYEHNAFA-PYLSKVVIAATLLHKATEYET

TrEMBL top hitse value%identityAlignment
A0A0A0KH71 Uncharacterized protein5.0e-1955.45Show/hide
Query:  YLVNRYHHQQITKTLRIKC-RSHGQSQEVKAATLLHKAMEYDTNSRWRFQTGAINIDYNFFVTLTPVIYEHNAFAPYLSKVVIAATLLHKATEYETTHNG
        +L   + +    +++  +C +S   SQEVKAATLLHKAMEYDTNSRWRFQTGAI+ID N FVTLTP IYEHN FAPYL K  I     HK  +    +  
Subjt:  YLVNRYHHQQITKTLRIKC-RSHGQSQEVKAATLLHKAMEYDTNSRWRFQTGAINIDYNFFVTLTPVIYEHNAFAPYLSKVVIAATLLHKATEYETTHNG

Query:  E
        E
Subjt:  E

A0A5D3C2D4 Uncharacterized protein6.1e-2577.11Show/hide
Query:  RSHGQSQEVKAATLLHKAMEYDTNSRWRFQTGAINIDYNFFVTLTPVIYEHNAFAPYLSKVVIAATLLHKATEYETTHNGERP
        RSHGQSQEVKAATLLHKAMEYDTN+R RFQ GAI+IDYN+FVTLTP            SKV IAATLLHKATEYETTHNGE P
Subjt:  RSHGQSQEVKAATLLHKAMEYDTNSRWRFQTGAINIDYNFFVTLTPVIYEHNAFAPYLSKVVIAATLLHKATEYETTHNGERP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAGAAAGCAAATACACAAAAGAGAAGCCTCAGATTATCGGATTTGACAGCAAGGCTTGAGAAGCCATTCAGTCCCGAAAGATGGTATTTAGTTAACCGATATCA
TCATCAGCAGATTACTAAAACATTAAGAATAAAATGTAGGTCTCATGGCCAGTCCCAAGAAGTAAAGGCAGCAACGCTGCTCCACAAGGCAATGGAATATGATACCAACA
GTCGATGGAGATTCCAAACAGGAGCCATCAACATCGACTATAATTTCTTTGTGACGTTAACTCCGGTAATATACGAACATAACGCGTTCGCTCCATATCTATCCAAAGTG
GTAATTGCAGCGACGCTGCTCCACAAGGCGACGGAATATGAGACCACCCACAACGGAGAACGTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACAGAAAGCAAATACACAAAAGAGAAGCCTCAGATTATCGGATTTGACAGCAAGGCTTGAGAAGCCATTCAGTCCCGAAAGATGGTATTTAGTTAACCGATATCA
TCATCAGCAGATTACTAAAACATTAAGAATAAAATGTAGGTCTCATGGCCAGTCCCAAGAAGTAAAGGCAGCAACGCTGCTCCACAAGGCAATGGAATATGATACCAACA
GTCGATGGAGATTCCAAACAGGAGCCATCAACATCGACTATAATTTCTTTGTGACGTTAACTCCGGTAATATACGAACATAACGCGTTCGCTCCATATCTATCCAAAGTG
GTAATTGCAGCGACGCTGCTCCACAAGGCGACGGAATATGAGACCACCCACAACGGAGAACGTCCTTAA
Protein sequenceShow/hide protein sequence
MKQKANTQKRSLRLSDLTARLEKPFSPERWYLVNRYHHQQITKTLRIKCRSHGQSQEVKAATLLHKAMEYDTNSRWRFQTGAINIDYNFFVTLTPVIYEHNAFAPYLSKV
VIAATLLHKATEYETTHNGERP