; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G04010 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G04010
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTumor necrosis factor receptor family protein
Genome locationChr5:4018413..4022429
RNA-Seq ExpressionCSPI05G04010
SyntenyCSPI05G04010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145885.1 uncharacterized protein LOC101211684 [Cucumis sativus]4.9e-81100Show/hide
Query:  MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR
        MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR
Subjt:  MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR

Query:  KMLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
        KMLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
Subjt:  KMLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK

XP_008437479.1 PREDICTED: uncharacterized protein LOC103482888 [Cucumis melo]1.1e-7794.81Show/hide
Query:  MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR
        MWFRSIQRIGN DGGGG  GLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV+QQHGPLT+SNAWIKAQESGVNGLNSKTHMKLLLKWMRGR
Subjt:  MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR

Query:  KMLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
        +MLNLFCHYVGSNKKFLLCTPDDPRAEELKN SE+GPQRKKRAKSPTKRRKTSK
Subjt:  KMLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK

XP_022159821.1 uncharacterized protein LOC111026127 [Momordica charantia]3.9e-6280.65Show/hide
Query:  MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR
        MW R  QRIG+ADGGGG AGLVF+TFAR+FSRKRAENLRKINPKLTPQEASLVAQDLYGVV+QHGPL+ISNAWIKAQE GV+GLNSKTHMKL+LKWMRGR
Subjt:  MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR

Query:  KMLNLFCHYVGSNKKFLLCT-PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
        KML L C+ VGSNKKFLL T PDDP+A++LK+SSE G QR+KR K P +RRK SK
Subjt:  KMLNLFCHYVGSNKKFLLCT-PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK

XP_022958708.1 uncharacterized protein LOC111459852 [Cucurbita moschata]8.8e-6281.05Show/hide
Query:  WFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRK
        W R IQ I NADGGGG AGLVF+TF R+FSR RAENLRKINPKLTPQEASLVAQDLYGVV+QHGPLT+SNAWIKAQESGV GLNSKTHMKLLLKWMRGRK
Subjt:  WFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRK

Query:  MLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
        ML LFC+ VGSNKKFLL TPDDPRAEELK++SE   QR+K+ K+  +RRK SK
Subjt:  MLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK

XP_038876162.1 uncharacterized protein LOC120068455 [Benincasa hispida]2.5e-7290.91Show/hide
Query:  MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR
        MW RSIQRIGNADGGGG AGLVF+TFAR+FSRKRAENLRKINPKLTPQEASLVAQDLYGVV+QHGPLT+SNAWIKAQESGVNGLNSKTHMKLLLKWMRGR
Subjt:  MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR

Query:  KMLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
        KMLNLFC+ VGSNKKFLLCTPDDPRAE+LK+SSE+G QRKKRAKSP KRRK SK
Subjt:  KMLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK

TrEMBL top hitse value%identityAlignment
A0A0A0KK52 Uncharacterized protein2.4e-81100Show/hide
Query:  MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR
        MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR
Subjt:  MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR

Query:  KMLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
        KMLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
Subjt:  KMLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK

A0A1S3ATS9 uncharacterized protein LOC1034828885.5e-7894.81Show/hide
Query:  MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR
        MWFRSIQRIGN DGGGG  GLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV+QQHGPLT+SNAWIKAQESGVNGLNSKTHMKLLLKWMRGR
Subjt:  MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR

Query:  KMLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
        +MLNLFCHYVGSNKKFLLCTPDDPRAEELKN SE+GPQRKKRAKSPTKRRKTSK
Subjt:  KMLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK

A0A6J1E538 uncharacterized protein LOC1110261271.9e-6280.65Show/hide
Query:  MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR
        MW R  QRIG+ADGGGG AGLVF+TFAR+FSRKRAENLRKINPKLTPQEASLVAQDLYGVV+QHGPL+ISNAWIKAQE GV+GLNSKTHMKL+LKWMRGR
Subjt:  MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGR

Query:  KMLNLFCHYVGSNKKFLLCT-PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
        KML L C+ VGSNKKFLL T PDDP+A++LK+SSE G QR+KR K P +RRK SK
Subjt:  KMLNLFCHYVGSNKKFLLCT-PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK

A0A6J1H3U5 uncharacterized protein LOC1114598524.2e-6281.05Show/hide
Query:  WFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRK
        W R IQ I NADGGGG AGLVF+TF R+FSR RAENLRKINPKLTPQEASLVAQDLYGVV+QHGPLT+SNAWIKAQESGV GLNSKTHMKLLLKWMRGRK
Subjt:  WFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRK

Query:  MLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
        ML LFC+ VGSNKKFLL TPDDPRAEELK++SE   QR+K+ K+  +RRK SK
Subjt:  MLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK

A0A6J1K817 uncharacterized protein LOC1114914951.6e-6180.39Show/hide
Query:  WFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRK
        W R IQ I NADGGGG AGLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGVV+QHGPLT+SNAWIKAQESGV GLNSKTHMKLLLKWMRGRK
Subjt:  WFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRK

Query:  MLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
        ML LFC+ VGSNKKFLL TP+DPRAEELK++SE   QR+K+ K+  +R+K SK
Subjt:  MLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73940.1 unknown protein5.0e-3147.2Show/hide
Query:  MWFRSIQRIGNADGGGGF-----AGLVFNT-------FARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKT
        MWF        A GGGG      A  +F+          R+ SR+RA N+RKINPK+  QEA  ++  LY + + HGPL++ N W++AQE+GV+GLNSKT
Subjt:  MWFRSIQRIGNADGGGGF-----AGLVFNT-------FARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKT

Query:  HMKLLLKWMRGRKMLNLFCHYVGSNKKFL-LCTPDDPRAEE----LKNSSEAGPQRKKRAK
        HMKLLLKWMRG+KML L C+ VGS+KKF     P+DP  E+    ++N  +A   +KKR+K
Subjt:  HMKLLLKWMRGRKMLNLFCHYVGSNKKFL-LCTPDDPRAEE----LKNSSEAGPQRKKRAK

AT5G49410.1 unknown protein2.2e-1837.37Show/hide
Query:  VFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT
        V     RHF+ K    ++ I     P++   + + ++ +++ HGPLTI+  W + +E G+ GL SK HMK++L+WMR R+ L L C++VG +K+FL  T
Subjt:  VFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT

AT5G49410.2 unknown protein2.2e-1837.37Show/hide
Query:  VFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT
        V     RHF+ K    ++ I     P++   + + ++ +++ HGPLTI+  W + +E G+ GL SK HMK++L+WMR R+ L L C++VG +K+FL  T
Subjt:  VFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGAGGTTTTGCTGGCCTCGTGTTCAACACATTTGCGAGGCATTTCTCGAGGAAGCGAGCAGAAAA
TCTTAGGAAGATTAATCCCAAGTTGACTCCTCAGGAAGCTTCGTTGGTTGCTCAAGATCTCTATGGTGTTGTCCAGCAGCACGGCCCTCTCACCATTTCCAATGCTTGGA
TTAAAGCTCAGGAATCTGGCGTGAATGGATTGAACAGCAAAACACACATGAAGCTACTGCTGAAATGGATGAGGGGAAGGAAGATGCTGAACCTTTTCTGCCACTACGTT
GGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGATGATCCTCGGGCAGAAGAGTTGAAGAATTCTTCAGAAGCGGGACCCCAGAGAAAGAAGAGAGCGAAGTCACCAAC
AAAGAGAAGAAAGACATCAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATCGCAACACAAACTGAAGTCTCACAGAAAAAACCCTGCGTGGCTAAATTCTTCTGGCTCGTAGTCGTCTCTCTCGGAACTTCAGAGCCTTGGCGGCGGCGCGCAGTAGT
AGTTATTGAAGGACAGCGGTAGCGCTTTGAGTCGGGACATAGCGCGGTAGATTGGATTAGATATGTGGTTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGA
GGTTTTGCTGGCCTCGTGTTCAACACATTTGCGAGGCATTTCTCGAGGAAGCGAGCAGAAAATCTTAGGAAGATTAATCCCAAGTTGACTCCTCAGGAAGCTTCGTTGGT
TGCTCAAGATCTCTATGGTGTTGTCCAGCAGCACGGCCCTCTCACCATTTCCAATGCTTGGATTAAAGCTCAGGAATCTGGCGTGAATGGATTGAACAGCAAAACACACA
TGAAGCTACTGCTGAAATGGATGAGGGGAAGGAAGATGCTGAACCTTTTCTGCCACTACGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGATGATCCTCGGGCA
GAAGAGTTGAAGAATTCTTCAGAAGCGGGACCCCAGAGAAAGAAGAGAGCGAAGTCACCAACAAAGAGAAGAAAGACATCAAAATAGACTTTTGCTAACGTCTGTTATTT
TAGCATGCAGTGGGCTGGCTATCCTCCTTTGAGTTTGTAATGATGCGGGTTCAGGACGCATGGTGAATTTGTGAGTCCCTCCACCCTTTTCTTGCCCCCATTTCAGCTCA
TTTTGGTCACATGCAAGGTTTTTTTTTGAATATTTTACATTGACTTGTTTCCATGTAATTGACTGATAAAGCATGTATTTAAATTCATCTTCGATAAAGCATGGATCACG
ATGCGCTCATTGGTTGAATAGCTAGACTAAACCACTATTGATTGGCCTAATAGGAGCCATCTAAATAAAAGGCTTACAGAGTTTTAAATCATGTTGGCCATGTACTTTGA
CTTGAGATTCTATGGATTACTTTGGCTACCAGATGTAGTAGGGTGATGGTGACTGTCTAGTTTAGTTTCAATTCAAGTGCCATCGGCTACTTTGAAATTTTATGTTTTAC
CGATGAAACTTCGAATATACATTAAGTATGAAATTGATCCTTTTTTCCC
Protein sequenceShow/hide protein sequence
MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYV
GSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK