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CSPI05G04090 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G04090
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMitochondrial import inner membrane translocase subunit
Genome locationChr5:4092558..4095471
RNA-Seq ExpressionCSPI05G04090
SyntenyCSPI05G04090
Gene Ontology termsGO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0042719 - mitochondrial intermembrane space protein transporter complex (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily
IPR039238 - Mitochondrial import inner membrane translocase subunit Tim8/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145880.1 mitochondrial import inner membrane translocase subunit Tim13 [Cucumis sativus]2.0e-39100Show/hide
Query:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
XP_022159838.1 mitochondrial import inner membrane translocase subunit Tim13 [Momordica charantia]1.2e-3694.25Show/hide
Query:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSG S QFSA+EF+DQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVS+ALFKTPH
Subjt:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
XP_022929052.1 mitochondrial import inner membrane translocase subunit TIM13-like isoform X6 [Cucurbita moschata]1.9e-3796.55Show/hide
Query:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSS QFS NEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
XP_023520535.1 mitochondrial import inner membrane translocase subunit Tim13 [Cucurbita pepo subsp. pepo]1.6e-3695.4Show/hide
Query:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSS QFS NEFRDQLKTQLAQAYAEEFLETLRVKCF KCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
XP_038906948.1 mitochondrial import inner membrane translocase subunit TIM13 [Benincasa hispida]1.7e-3898.85Show/hide
Query:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSS QFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
TrEMBL top hitse value%identityAlignment
A0A0A0KK66 Mitochondrial import inner membrane translocase subunit9.8e-40100Show/hide
Query:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
A0A1S3AUN2 Mitochondrial import inner membrane translocase subunit9.8e-40100Show/hide
Query:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
A0A6J1DZZ6 Mitochondrial import inner membrane translocase subunit6.0e-3794.25Show/hide
Query:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSG S QFSA+EF+DQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVS+ALFKTPH
Subjt:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
A0A6J1ELP2 Mitochondrial import inner membrane translocase subunit9.2e-3896.55Show/hide
Query:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSS QFS NEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
A0A6J1I4K9 Mitochondrial import inner membrane translocase subunit9.2e-3896.55Show/hide
Query:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        MDSFSSPSSGSS QFS NEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
SwissProt top hitse value%identityAlignment
Q6DGJ3 Mitochondrial import inner membrane translocase subunit Tim136.4e-1245.78Show/hide
Query:  MDSFSS--PSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRA
        M+ F S   S  SS +       +Q+K Q+A A A+E L+ +  KCF KCI KPGS+L  SE  CI+ CM+RY++A + VSRA
Subjt:  MDSFSS--PSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRA
Q8AVK1 Mitochondrial import inner membrane translocase subunit Tim13-B3.8e-1246.43Show/hide
Query:  MDSFSSPSS---GSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRA
        MD F S  S    SS +       +Q+K Q+A A A+E L+ +  KCF KCI KPG SL  SE  C++ CM+RY++A +IVSRA
Subjt:  MDSFSSPSS---GSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRA
Q9VTN3 Mitochondrial import inner membrane translocase subunit Tim133.2e-1150Show/hide
Query:  EFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSR
        E  +Q+K Q+A A A+E L  +  KCF KCI KPG SL  +E  CIS+CM+R+++A ++VSR
Subjt:  EFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSR
Q9XGY5 Mitochondrial import inner membrane translocase subunit Tim133.9e-2574.12Show/hide
Query:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKT
        MDSFSS SSGS P   A    DQ+K QLAQAYA+EFLET+  KCF KC+TKPGSSLSGSESSCISRC++RYIEAT IVSRALF +
Subjt:  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKT
Q9XH48 Mitochondrial import inner membrane translocase subunit TIM133.0e-2569.05Show/hide
Query:  MDSFSS-PSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF
        MDS+SS P  GS    S     + +KTQLAQAYAEE +ETLR KCFDKC+TKPGSSL GSESSCISRC+ERY+EAT+I+SR+LF
Subjt:  MDSFSS-PSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF
Arabidopsis top hitse value%identityAlignment
AT1G61570.1 translocase of the inner mitochondrial membrane 132.1e-2669.05Show/hide
Query:  MDSFSS-PSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF
        MDS+SS P  GS    S     + +KTQLAQAYAEE +ETLR KCFDKC+TKPGSSL GSESSCISRC+ERY+EAT+I+SR+LF
Subjt:  MDSFSS-PSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF
AT5G50810.1 translocase inner membrane subunit 84.1e-0634.67Show/hide
Query:  PSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITK-PGSSLSGSESSCISRCMERYIEATSIVSR
        PS  ++P     E    L  +  +A   E +  +   C+DKCIT  PGS  S SESSC++ C +RY++ + I+ +
Subjt:  PSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITK-PGSSLSGSESSCISRCMERYIEATSIVSR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCGTTTTCATCGCCTTCAAGCGGCTCTTCTCCCCAATTTTCTGCCAATGAATTCAGGGATCAGCTCAAGACTCAGCTTGCTCAGGCCTACGCCGAGGAGTTTCT
TGAGACCTTAAGAGTGAAGTGCTTTGACAAGTGTATCACAAAGCCAGGGTCAAGCTTAAGTGGAAGTGAGAGCAGTTGCATCTCTAGGTGCATGGAGCGTTATATTGAAG
CAACCAGCATCGTCAGTAGAGCCCTCTTTAAGACACCACACTAA
mRNA sequenceShow/hide mRNA sequence
ATTAATTATAAGAATTAGAAGGACAAAATTTCAATTAAGAGTTATAAATTAGTGTGAGTAATTAAGTTAATTTTGCTATTAAGGGTTTAGTCAAAGAAAATTTATTGACC
AAATGTGGATTGAAGAGTAAAGAAGGACACCAAAGGCGCGCTCGCCCTAATCGCATTGCCATAGACATCGCCGCCTGCCCTCGAACACAAGATCAGCTCTACGGCGCAGC
GCAAACGAATACACGAAGCGGCTGTGGTTTATAGGGTTTTACAACCACCGAACAAATGGATTCGTTTTCATCGCCTTCAAGCGGCTCTTCTCCCCAATTTTCTGCCAATG
AATTCAGGGATCAGCTCAAGACTCAGCTTGCTCAGGCCTACGCCGAGGAGTTTCTTGAGACCTTAAGAGTGAAGTGCTTTGACAAGTGTATCACAAAGCCAGGGTCAAGC
TTAAGTGGAAGTGAGAGCAGTTGCATCTCTAGGTGCATGGAGCGTTATATTGAAGCAACCAGCATCGTCAGTAGAGCCCTCTTTAAGACACCACACTAAAGGAACAGGTT
TTCCTGAGACATTATGAGGTCGAGGTATCTTCAGCAACCACCAACCTACATTATTTTTCTTGGTTAGATATTTGTTTTCCAGCTCTAAAATCTTTCTTGAGGAGACAAGT
TTTTGATCTGTGCCCCATAGATAATATCGGTATCACGTTCTTTATTTGCTTAACATGTGAACTTCGGGTCATTTAAACTCTCATTTCTTCTGATTTAACATGCTTCAATT
GGGTTTATTACCATTTGGGGGTTCATTGTTCATCTATTAATGCAAACTGCTCAACCTAGAATAAATAGTGTACTCTTCAAAATTTTGAAGTTGAGTTAATCTGTTGCCTT
GATTTTTATACACTTTTCCAGC
Protein sequenceShow/hide protein sequence
MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH