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CSPI05G05690 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G05690
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionF-box/LRR-repeat protein
Genome locationChr5:5219097..5219543
RNA-Seq ExpressionCSPI05G05690
SyntenyCSPI05G05690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042782.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]2.5e-2985.39Show/hide
Query:  MASQNSIPPNSLFLCLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQNS PP SLFL LF+ILL TTTPLHAARR P SAPQPEND  SL PPTT+TFSF QPPAAV+DQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSIPPNSLFLCLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN

KAG6579492.1 hypothetical protein SDJN03_23940, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1865.17Show/hide
Query:  MASQNSIPPNSLFLCLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQN  P  SL L LF+ILLTTT PL A RR  T+   PENDSL   PP T++FSF QPP  VE+Q  S+NY VS RKVPAGPNPLHN
Subjt:  MASQNSIPPNSLFLCLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN

KAG6606114.1 Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0855.95Show/hide
Query:  MASQNSIPPNSLFLCLFMI-LLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAG
        MAS N   PNS FL LF++ +L TT  L AA      A QP ND  SL PPT+STFS  + P AVED I  +N+ VSLRKVPAG
Subjt:  MASQNSIPPNSLFLCLFMI-LLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAG

KGN50125.1 hypothetical protein Csa_000058 [Cucumis sativus]8.4e-4198.88Show/hide
Query:  MASQNSIPPNSLFLCLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQNSIPPNSLFL LFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSIPPNSLFLCLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KKA9 Uncharacterized protein4.1e-4198.88Show/hide
Query:  MASQNSIPPNSLFLCLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQNSIPPNSLFL LFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSIPPNSLFLCLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN

A0A5A7THA6 F-box/LRR-repeat protein1.2e-2985.39Show/hide
Query:  MASQNSIPPNSLFLCLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQNS PP SLFL LF+ILL TTTPLHAARR P SAPQPEND  SL PPTT+TFSF QPPAAV+DQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSIPPNSLFLCLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCAAAACTCCATTCCTCCTAATTCTCTCTTCCTCTGCCTCTTCATGATTCTCCTCACCACCACCACCCCTCTCCACGCCGCCCGCCGTCCACCCACCTCCGC
CCCACAACCGGAAAACGATTCTCTCAGTCTCCACCCACCCACCACCTCAACATTTTCATTCACGCAGCCGCCGGCCGCCGTGGAAGACCAAATCACTTCCCGAAACTACG
GCGTTTCACTCCGCAAAGTCCCCGCCGGTCCCAACCCACTTCATAACTAA
mRNA sequenceShow/hide mRNA sequence
CCTTAATAAAATGACACTTCCCACAATTCTCCATTTTCCCATTTTCCCATTTTCAATTCCTTCACTTCTTCTTCTAATTCACTCTCAAAAACCTCTCTCTCTCCTCCATT
GAAAAACCTTAATTAGAAACACCTCTCTCAAATAAAAATGGCTTCTCAAAACTCCATTCCTCCTAATTCTCTCTTCCTCTGCCTCTTCATGATTCTCCTCACCACCACCA
CCCCTCTCCACGCCGCCCGCCGTCCACCCACCTCCGCCCCACAACCGGAAAACGATTCTCTCAGTCTCCACCCACCCACCACCTCAACATTTTCATTCACGCAGCCGCCG
GCCGCCGTGGAAGACCAAATCACTTCCCGAAACTACGGCGTTTCACTCCGCAAAGTCCCCGCCGGTCCCAACCCACTTCATAACTAATCGCATCAACCTCCGAAGATCTT
AAGGGAA
Protein sequenceShow/hide protein sequence
MASQNSIPPNSLFLCLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN