; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G07590 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G07590
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionU6 snRNA phosphodiesterase
Genome locationChr5:6540957..6543568
RNA-Seq ExpressionCSPI05G07590
SyntenyCSPI05G07590
Gene Ontology termsGO:0034477 - U6 snRNA 3'-end processing (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:1990838 - poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends (molecular function)
InterPro domainsIPR027521 - U6 snRNA phosphodiesterase Usb1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143673.1 U6 snRNA phosphodiesterase [Cucumis sativus]9.0e-16199.65Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL
        MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL
Subjt:  MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL

Query:  FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
        FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQA AREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
Subjt:  FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL

Query:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE
        MEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE
Subjt:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE

XP_008467330.1 PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo]3.9e-15696.89Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL
        MDALRASYGGSSSDEEVDTVSP SASTS PQF DETV+ LPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL
Subjt:  MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL

Query:  FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
        FMKKISSLVPALHLVDIDIPLDVLCKDD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
Subjt:  FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL

Query:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE
        MEIRKQIQVVNEVYKLHNLPEFYKEARPHIS+AWALGDVSQ+SSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKF DE
Subjt:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE

XP_022969741.1 U6 snRNA phosphodiesterase [Cucurbita maxima]4.8e-13884.18Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPPSASTSA--------PQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPT
        M+AL ASYGGSSSDE+ DTVSP SAS SA        PQ  DET +FLPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYA+H+YIPVY+PT
Subjt:  MDALRASYGGSSSDEEVDTVSPPSASTSA--------PQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPT

Query:  NARKEVALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLS
        NARKEVALF+KK+S LVPALHLVDIDIPLD+LCKDD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLS
Subjt:  NARKEVALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLS

Query:  MEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE
        MEII GGLMEIRK+IQVVNEVYKLHNLPEFYKEARPHIS+AWALGD+S+L SQ+VH+E+K+S VKE  KRCIFT KFNGIECKIGKKM+KICKFPDE
Subjt:  MEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE

XP_023549871.1 U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo]1.3e-13885.32Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPPSASTSA----PQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARK
        M+AL ASYGGSSSDE+VDTVSP SAS SA    PQ  DET +FLPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYA+H+YIPVY+PTNARK
Subjt:  MDALRASYGGSSSDEEVDTVSPPSASTSA----PQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARK

Query:  EVALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEII
        EVALF+KK+S LVPALHLVDIDIPLD+LCKDD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EVALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE
         GGLMEIRK IQVVNEVYKLHNLPEFYKE RPHIS+AWALGD+S+L SQ+VH+E+K+S VKE  KRCIFT KFNGIECKIGKKM+KICKFPDE
Subjt:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE

XP_038875354.1 U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida]3.8e-14388.32Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPPSASTSA--PQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEV
        MDALRASYGGSSSDEE DTVSP SASTSA  PQ  DETV+FLPLPPP  SLL+FPNST +LDDLPIDQATRVRSFPHVQGNYALH+YIPVYVPTN RKEV
Subjt:  MDALRASYGGSSSDEEVDTVSPPSASTSA--PQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEV

Query:  ALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITG
        ALF+KK+SSLVPALHLVDID+PLDVLCKDD KLEQALAREFH+SLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEIITG
Subjt:  ALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITG

Query:  GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE
        GLMEIRKQIQ+VNEVYKLHNLPEFYKEARPHIS+AWA+GD+S+L SQAVHNE+K SAV +  KRCIFTTKF GIECKIGKK+YKICKFPDE
Subjt:  GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE

TrEMBL top hitse value%identityAlignment
A0A0A0KPH5 U6 snRNA phosphodiesterase4.4e-16199.65Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL
        MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL
Subjt:  MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL

Query:  FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
        FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQA AREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
Subjt:  FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL

Query:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE
        MEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE
Subjt:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE

A0A1S3CTB0 U6 snRNA phosphodiesterase1.9e-15696.89Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL
        MDALRASYGGSSSDEEVDTVSP SASTS PQF DETV+ LPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL
Subjt:  MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL

Query:  FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
        FMKKISSLVPALHLVDIDIPLDVLCKDD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
Subjt:  FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL

Query:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE
        MEIRKQIQVVNEVYKLHNLPEFYKEARPHIS+AWALGDVSQ+SSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKF DE
Subjt:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE

A0A6J1DNL4 U6 snRNA phosphodiesterase1.2e-11876.82Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL
        MDAL+ASY GSSSDEE D VS      +AP  L        LPPPPLSLL+FPNS   L DLPI Q TR RSFPHV+GNYALHVYIPVY+PT ++KEV L
Subjt:  MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL

Query:  FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
        F+KK+SSLVP+LHLVDID+PL  LCKD+ KLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ  RRYWIDFSKWETFVNDDLSRTFLSMEII GGL
Subjt:  FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL

Query:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE
        MEIRKQIQVVNEVYK HNLPEFYKE RPHIS+AWALGD+S+L S+ V +++KRS++  P KRCIFTTKF+GIECKIGKK YKICK PDE
Subjt:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE

A0A6J1EQH7 U6 snRNA phosphodiesterase2.0e-13785.57Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPPSASTSA--PQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEV
        M+AL ASYGGSSSDE+VDTVSP SAS SA  PQ  DET +FLPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYALH+YIPVY+ TNARKEV
Subjt:  MDALRASYGGSSSDEEVDTVSPPSASTSA--PQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEV

Query:  ALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITG
        ALF+KK+S LVPALHLVDIDIPLD+LCKDD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEII G
Subjt:  ALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITG

Query:  GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE
        GLMEIRK IQVVNEVYKLHNLPEFYKE RPHIS+AWALGD+S+L SQ+VH+E+K+S VKE  KR IFT KFNGIECKIGKKM+KICKFPDE
Subjt:  GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE

A0A6J1HYN3 U6 snRNA phosphodiesterase2.3e-13884.18Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPPSASTSA--------PQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPT
        M+AL ASYGGSSSDE+ DTVSP SAS SA        PQ  DET +FLPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYA+H+YIPVY+PT
Subjt:  MDALRASYGGSSSDEEVDTVSPPSASTSA--------PQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPT

Query:  NARKEVALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLS
        NARKEVALF+KK+S LVPALHLVDIDIPLD+LCKDD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLS
Subjt:  NARKEVALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLS

Query:  MEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE
        MEII GGLMEIRK+IQVVNEVYKLHNLPEFYKEARPHIS+AWALGD+S+L SQ+VH+E+K+S VKE  KRCIFT KFNGIECKIGKKM+KICKFPDE
Subjt:  MEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE

SwissProt top hitse value%identityAlignment
Q0II50 U6 snRNA phosphodiesterase6.3e-1628.12Show/hide
Query:  YGGSSSDEEVDT---VSPPSASTSAPQFLDETVTFLPLP----PPPLSLLNFPNSTCVLDDLPIDQAT----RVRSFPHVQGNYALHVYIPVYVPTNARK
        Y  S S++E +    V P +   S  Q         PLP    P P S+L+   ST   ++ P+D +     RVR+FPH +GN+A HVYIP      AR+
Subjt:  YGGSSSDEEVDT---VSPPSASTSAPQFLDETVTFLPLP----PPPLSLLNFPNSTCVLDDLPIDQAT----RVRSFPHVQGNYALHVYIPVYVPTNARK

Query:  EVALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALARE-FHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEI
        E              L L+D      +LC     + + +  E FH+SLS++V +R H I   V  L+ ++ S  R+     + + + N + +RTF+ +E 
Subjt:  EVALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALARE-FHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEI

Query:  ITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKI
        +T G       +  V+ V +  +L  FY++   HIS+AW +GD           EL+    +      +       I CK G K + +
Subjt:  ITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKI

Q5I0I5 U6 snRNA phosphodiesterase1.4e-1825.27Show/hide
Query:  YGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLP----PPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFM
        Y  S S++E + V   +A  S P          PLP    P P S+LN FP++    +D       R+R+FPH +GN+A H+YIP       +  + + +
Subjt:  YGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLP----PPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFM

Query:  KKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLME
         +     P L  ++                     EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ + + N + +RTF+ +E ++ G  +
Subjt:  KKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLME

Query:  IRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKI
            +  V+ V K  +L  FY++   H+S+AW +GD           EL+    +      +       + CK G K + +
Subjt:  IRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKI

Q6DEF6 U6 snRNA phosphodiesterase2.1e-1930.14Show/hide
Query:  SYGGSSSDEEVDTVSPPSA-----STSAPQFLD---------ETVTFLPLPPPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVP
        +Y  SSS+EE  + S PS       T   + LD         ++    P  P P S+   F +S  +  D   +   R+RSF H +GN+A +V+ P Y P
Subjt:  SYGGSSSDEEVDTVSPPSA-----STSAPQFLD---------ETVTFLPLPPPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVP

Query:  TNARKEVALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFL
          A      F++ ++ ++ A      DIPL V            + EFH+SLS+TV +R H I   V  +R  L   ++++    K + + N + +RTFL
Subjt:  TNARKEVALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFL

Query:  SMEIITG--GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMY
         ME+ TG   L+E+ K   +V+E  K  NL  FY++   HIS+AW +GD ++   +A   EL+                 N + CK G K++
Subjt:  SMEIITG--GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMY

Q91W78 U6 snRNA phosphodiesterase1.5e-2026.52Show/hide
Query:  YGGSSSDEEVDTVSP--PSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKI
        Y  S S++E + V+       T   +     V    LP P   L  FP++    +D       R+R+FPH +GN+A H+YIP     + R  +   + + 
Subjt:  YGGSSSDEEVDTVSP--PSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKI

Query:  SSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRK
           VP L L++                     EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ + + N + +RTF+ +E ++ G  +   
Subjt:  SSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRK

Query:  QIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVS-QLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKI
         +  V+   K  +L  FY++   HIS+AW +GD S QL  Q +  EL+    +      +     N + CK G K + +
Subjt:  QIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVS-QLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKI

Q9BQ65 U6 snRNA phosphodiesterase4.0e-1830.04Show/hide
Query:  PLP----PPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQAL
        PLP    P P S+LN FP +    +D       RVR+FPH +GN+A H    VYVP  A++E                   +D+ LDVL    Q     L
Subjt:  PLP----PPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQAL

Query:  AR--EFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVA
         R   FH+SLS++V +R H I   V  L+ ++ S  R++   ++ + + N + +RTF+ +E +T G  +    +  V+ V +  NL  FY++   H+S+A
Subjt:  AR--EFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVA

Query:  WALGDVS-QLSSQAVHNELKRSAVKEPFK--RCIFTTKFNGIECKIGKKMYKI
        W +GD   QL  Q +    +  A+ + F+    +       + CK G K + +
Subjt:  WALGDVS-QLSSQAVHNELKRSAVKEPFK--RCIFTTKFNGIECKIGKKMYKI

Arabidopsis top hitse value%identityAlignment
AT5G51170.1 unknown protein1.0e-9359.52Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL
        M+ALRASYG SSSD + D +SP S  T+     D     + LPPPPL+LL+   ST  LD    +   RVR+FPHV GNYALHVY+PV +P   +KE+  
Subjt:  MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL

Query:  FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
        F+KK++S+VP LHLV+ D+PL +LCKDDQK E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ  +RY IDF+KWE FVNDD +R+FLS+EI T GL
Subjt:  FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL

Query:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE
         EI KQI  VNEVYKLHNLPEFYK+ RPHIS+ WALGD+      AV  EL++       +  IFT+KF GIECKIG K +KICK PDE
Subjt:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE

AT5G51170.2 unknown protein2.7e-6256.67Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL
        M+ALRASYG SSSD + D +SP S  T+     D     + LPPPPL+LL+   ST  LD    +   RVR+FPHV GNYALHVY+PV +P   +KE+  
Subjt:  MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVAL

Query:  FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
        F+KK++S+VP LHLV+ D+PL +LCKDDQK E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ  +RY IDF+KWE FVNDD +R+FLS+EI T GL
Subjt:  FMKKISSLVPALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL

Query:  MEIRKQIQVV
         E+  ++ ++
Subjt:  MEIRKQIQVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTCTGAGGGCTTCCTATGGAGGAAGCTCGTCAGATGAAGAAGTGGATACAGTCTCCCCTCCATCAGCATCCACATCAGCACCACAATTCTTGGATGAGACTGT
GACCTTTTTACCTCTGCCTCCACCGCCTCTCTCACTTCTCAATTTTCCAAATTCCACCTGTGTTTTGGATGATTTGCCCATCGATCAGGCGACTAGGGTTCGAAGCTTTC
CTCACGTTCAAGGAAACTATGCCCTACACGTCTATATCCCAGTGTATGTACCAACTAATGCAAGGAAGGAGGTGGCCTTGTTTATGAAGAAAATTTCCTCACTTGTGCCA
GCTCTCCATCTGGTTGATATTGACATTCCATTGGACGTTTTATGTAAAGATGACCAAAAACTTGAGCAAGCGTTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGT
GCCAATCCGAGTGCACCAGATTGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCTCCAAGGCGTTATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACG
ATGATCTTTCTCGAACATTTTTGTCAATGGAAATTATTACTGGCGGGCTAATGGAGATCAGAAAACAAATCCAAGTTGTTAATGAGGTTTATAAGCTCCACAATCTTCCT
GAATTTTACAAGGAAGCAAGACCACATATATCTGTTGCCTGGGCATTAGGTGACGTTAGTCAGTTATCGAGTCAAGCGGTTCATAATGAATTAAAAAGGTCCGCAGTTAA
AGAACCATTTAAGAGATGTATTTTCACCACCAAATTCAATGGCATCGAATGTAAGATTGGTAAAAAAATGTATAAAATATGTAAATTTCCTGACGAATGA
mRNA sequenceShow/hide mRNA sequence
GAAAAAATAAAAATAAGTATAAAAAACTACGCATCAAATGAACGTTGAAAAGTGTTTAGTTTATAAAGTCGAGAATAGTTTTTGAGGTTTTCGGGGTTTTTGGAGGCACA
CAAGAGTGATGAATTGCTTGAGAACAATCTCTCACTTGCACCATCGTCATTGCTGCCATTGACAAAGCAGAGAATGGATGCTCTGAGGGCTTCCTATGGAGGAAGCTCGT
CAGATGAAGAAGTGGATACAGTCTCCCCTCCATCAGCATCCACATCAGCACCACAATTCTTGGATGAGACTGTGACCTTTTTACCTCTGCCTCCACCGCCTCTCTCACTT
CTCAATTTTCCAAATTCCACCTGTGTTTTGGATGATTTGCCCATCGATCAGGCGACTAGGGTTCGAAGCTTTCCTCACGTTCAAGGAAACTATGCCCTACACGTCTATAT
CCCAGTGTATGTACCAACTAATGCAAGGAAGGAGGTGGCCTTGTTTATGAAGAAAATTTCCTCACTTGTGCCAGCTCTCCATCTGGTTGATATTGACATTCCATTGGACG
TTTTATGTAAAGATGACCAAAAACTTGAGCAAGCGTTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGTGCCAATCCGAGTGCACCAGATTGACTCAATAGTGACA
ATGCTTCGCCAGAAGCTTCAGTCTCCAAGGCGTTATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGATCTTTCTCGAACATTTTTGTCAATGGAAATTAT
TACTGGCGGGCTAATGGAGATCAGAAAACAAATCCAAGTTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGAAGCAAGACCACATATATCTGTTG
CCTGGGCATTAGGTGACGTTAGTCAGTTATCGAGTCAAGCGGTTCATAATGAATTAAAAAGGTCCGCAGTTAAAGAACCATTTAAGAGATGTATTTTCACCACCAAATTC
AATGGCATCGAATGTAAGATTGGTAAAAAAATGTATAAAATATGTAAATTTCCTGACGAATGAAAAGATCATTGTGTGAGACATGTTCTACAGTCTATGCCCATTAAATT
CTTTTCATGTATTTCAACTTTAGTAATTAAATATCTTACTATAGATATTGCAATTTTTATTCTCTTT
Protein sequenceShow/hide protein sequence
MDALRASYGGSSSDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVP
ALHLVDIDIPLDVLCKDDQKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLP
EFYKEARPHISVAWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFPDE