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CSPI05G07740 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G07740
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionlate embryogenesis abundant protein At5g17165-like
Genome locationChr5:6637979..6639696
RNA-Seq ExpressionCSPI05G07740
SyntenyCSPI05G07740
Gene Ontology termsNA
InterPro domainsIPR039291 - Late embryogenesis abundant protein At5g17165-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055104.1 uncharacterized protein E6C27_scaffold231G00300 [Cucumis melo var. makuwa]1.8e-5280.62Show/hide
Query:  MACSSKIIVAAA--AASPRLSLLLPHT-HLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSA
        MACSSKIIV A+  AA+PRLSLL+ H+ HLFPF N GFR+SHWSAYEKNQED IWPTMVPN +I  +LS++YWVPHP+TGVFGPPKAHH+SST+PNDTSA
Subjt:  MACSSKIIVAAA--AASPRLSLLLPHT-HLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSA

Query:  GGNE-GSVLNLKAWFRHNGLEDLEKPHTL
        GGNE GSVLNLKAWFRHNGLEDLEKPH+L
Subjt:  GGNE-GSVLNLKAWFRHNGLEDLEKPHTL

KAE8647930.1 hypothetical protein Csa_000491 [Cucumis sativus]8.1e-6695.38Show/hide
Query:  MACSSKIIVAAAAASPRLSLLLPHTHLFPFPNFG-----FRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDT
        MACSSKIIVAAAAASPRLSLLLPHT+LFPFPNFG     FRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDT
Subjt:  MACSSKIIVAAAAASPRLSLLLPHTHLFPFPNFG-----FRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDT

Query:  SAGGNEGSVLNLKAWFRHNGLEDLEKPHTL
        SAGGNEGSVLNLKAWFRHNGLEDLEKPHTL
Subjt:  SAGGNEGSVLNLKAWFRHNGLEDLEKPHTL

XP_004143665.1 late embryogenesis abundant protein At5g17165 [Cucumis sativus]1.1e-6799.2Show/hide
Query:  MACSSKIIVAAAAASPRLSLLLPHTHLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGN
        MACSSKIIVAAAAASPRLSLLLPHT+LFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGN
Subjt:  MACSSKIIVAAAAASPRLSLLLPHTHLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGN

Query:  EGSVLNLKAWFRHNGLEDLEKPHTL
        EGSVLNLKAWFRHNGLEDLEKPHTL
Subjt:  EGSVLNLKAWFRHNGLEDLEKPHTL

XP_016903720.1 PREDICTED: uncharacterized protein LOC103504694 [Cucumis melo]3.9e-5280.8Show/hide
Query:  SSKIIVAA--AAASPRLSLLLPHT-HLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGN
        +SKIIV A   AA+PRLSLL+ H+ HLFPF N GFR+SHWSAYEKNQED IWPTMVPN +I  +LS++YWVPHP+TGVFGPPKAHHNSST+PNDTSAGGN
Subjt:  SSKIIVAA--AAASPRLSLLLPHT-HLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGN

Query:  EGSVLNLKAWFRHNGLEDLEKPHTL
        EGSVLNLKAWFRHNGLEDLEKPH+L
Subjt:  EGSVLNLKAWFRHNGLEDLEKPHTL

XP_038875585.1 late embryogenesis abundant protein At5g17165-like [Benincasa hispida]1.7e-3965.35Show/hide
Query:  MACSSKIIVAAAAASPRLSLLLP-----HTHLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDT
        MA S +II+    ASPR  L  P     H+HLFP   F  R+SHWSAYEKN E+QIWPT+VP+H+I  ++SE+YW PHPETGVFGPP AH ++S VPNDT
Subjt:  MACSSKIIVAAAAASPRLSLLLP-----HTHLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDT

Query:  SAGGNEGSVLNLKAWFRHNGLEDLEKP
        SAGG E SVL++KAWFRHNGLEDLEKP
Subjt:  SAGGNEGSVLNLKAWFRHNGLEDLEKP

TrEMBL top hitse value%identityAlignment
A0A0A0KRJ5 Uncharacterized protein5.5e-6899.2Show/hide
Query:  MACSSKIIVAAAAASPRLSLLLPHTHLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGN
        MACSSKIIVAAAAASPRLSLLLPHT+LFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGN
Subjt:  MACSSKIIVAAAAASPRLSLLLPHTHLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGN

Query:  EGSVLNLKAWFRHNGLEDLEKPHTL
        EGSVLNLKAWFRHNGLEDLEKPHTL
Subjt:  EGSVLNLKAWFRHNGLEDLEKPHTL

A0A1S4E6U6 uncharacterized protein LOC1035046941.9e-5280.8Show/hide
Query:  SSKIIVAA--AAASPRLSLLLPHT-HLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGN
        +SKIIV A   AA+PRLSLL+ H+ HLFPF N GFR+SHWSAYEKNQED IWPTMVPN +I  +LS++YWVPHP+TGVFGPPKAHHNSST+PNDTSAGGN
Subjt:  SSKIIVAA--AAASPRLSLLLPHT-HLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGN

Query:  EGSVLNLKAWFRHNGLEDLEKPHTL
        EGSVLNLKAWFRHNGLEDLEKPH+L
Subjt:  EGSVLNLKAWFRHNGLEDLEKPHTL

A0A5A7UIY1 Uncharacterized protein8.5e-5380.62Show/hide
Query:  MACSSKIIVAAA--AASPRLSLLLPHT-HLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSA
        MACSSKIIV A+  AA+PRLSLL+ H+ HLFPF N GFR+SHWSAYEKNQED IWPTMVPN +I  +LS++YWVPHP+TGVFGPPKAHH+SST+PNDTSA
Subjt:  MACSSKIIVAAA--AASPRLSLLLPHT-HLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSA

Query:  GGNE-GSVLNLKAWFRHNGLEDLEKPHTL
        GGNE GSVLNLKAWFRHNGLEDLEKPH+L
Subjt:  GGNE-GSVLNLKAWFRHNGLEDLEKPHTL

A0A6J1H0D3 late embryogenesis abundant protein At5g17165-like2.2e-2455.93Show/hide
Query:  MACSSKIIVAAAAASPRLSLLLPHTHLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGG-
        MA +S +I+   AA PRL+ L           F  R+ HWSAYEKN E+++ PT+VP+H+I   LSEDYW PHP+TGVFGPP   HN   VP+DTSAGG 
Subjt:  MACSSKIIVAAAAASPRLSLLLPHTHLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGG-

Query:  NEGSVLNLKAWFRHNGLE
         EGSVL LK WFRH  LE
Subjt:  NEGSVLNLKAWFRHNGLE

A0A6J1K564 late embryogenesis abundant protein At5g17165-like3.3e-2856.35Show/hide
Query:  MACSSKIIVAAAAASPRLSLLLPHTHLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGG-
        MA +S +I+   AA PRL+ L           F  R+ HWSAYEKN E+++ PT+VP+H+I   +SEDYW PHP+TGVFGPP + HN   VP+DTSAGG 
Subjt:  MACSSKIIVAAAAASPRLSLLLPHTHLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGG-

Query:  NEGSVLNLKAWFRHNGLEDLEKPHTL
         EGSVL LK WFRH  LED EKPH L
Subjt:  NEGSVLNLKAWFRHNGLEDLEKPHTL

SwissProt top hitse value%identityAlignment
F4KFM8 Late embryogenesis abundant protein At5g171652.9e-1850.55Show/hide
Query:  FGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGNEGSVLNLKAWFRHNGLEDLEKPH
        F  R+ H SAY+KN E+++ P+ VP+ +I  D S+ YW PHP+TGVFGP     +SST   D   GG E SV+  KAWFR   LEDL+K H
Subjt:  FGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGNEGSVLNLKAWFRHNGLEDLEKPH

Arabidopsis top hitse value%identityAlignment
AT3G03150.1 unknown protein9.1e-1544.94Show/hide
Query:  RSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGNEG-SVLNLKAWFRHNGLEDLEKPH
        RS H SAY+KN ED++  + VP+ +I  D S+ YW PHP+TGVFGP    H++      T+ G ++  +VL   AWFR   LED +K H
Subjt:  RSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGNEG-SVLNLKAWFRHNGLEDLEKPH

AT5G17165.1 unknown protein2.1e-1950.55Show/hide
Query:  FGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGNEGSVLNLKAWFRHNGLEDLEKPH
        F  R+ H SAY+KN E+++ P+ VP+ +I  D S+ YW PHP+TGVFGP     +SST   D   GG E SV+  KAWFR   LEDL+K H
Subjt:  FGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGNEGSVLNLKAWFRHNGLEDLEKPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGCAGTTCGAAGATTATCGTTGCTGCTGCTGCTGCTAGTCCACGACTCTCATTATTACTTCCTCACACTCATCTCTTTCCCTTCCCTAATTTTGGCTTCCGGTC
AAGTCATTGGTCAGCGTACGAGAAGAACCAAGAGGACCAAATATGGCCTACAATGGTACCCAATCACCTGATCTCTCGTGATCTATCCGAAGATTATTGGGTTCCCCATC
CTGAAACCGGAGTTTTTGGGCCTCCAAAAGCCCACCACAATTCTTCAACTGTTCCCAACGACACGTCGGCTGGTGGTAACGAGGGTTCCGTTCTAAACCTCAAGGCTTGG
TTCCGACATAACGGCCTCGAAGACCTCGAGAAACCACACACTCTCTAA
mRNA sequenceShow/hide mRNA sequence
TTTCATAATCACAAAGAATATATAAATAAGAGCAGAGAAAAGGCATATTTTCATTTTGTGTGTGTTTCTCTTTCTATTCCCCCAACCATTGGCATTGGCTTGGCATCAAA
ACTAATATTTGTAGCTAAAGTACTTAACTTGTGTGTGTTTGATTTGCATGGCCTGCAGTTCGAAGATTATCGTTGCTGCTGCTGCTGCTAGTCCACGACTCTCATTATTA
CTTCCTCACACTCATCTCTTTCCCTTCCCTAATTTTGGCTTCCGGTCAAGTCATTGGTCAGCGTACGAGAAGAACCAAGAGGACCAAATATGGCCTACAATGGTACCCAA
TCACCTGATCTCTCGTGATCTATCCGAAGATTATTGGGTTCCCCATCCTGAAACCGGAGTTTTTGGGCCTCCAAAAGCCCACCACAATTCTTCAACTGTTCCCAACGACA
CGTCGGCTGGTGGTAACGAGGGTTCCGTTCTAAACCTCAAGGCTTGGTTCCGACATAACGGCCTCGAAGACCTCGAGAAACCACACACTCTCTAATTTGGACCCTTGCGA
TCATATGATAAGAAGATAATAAATAGTATTTTGTCACACATTAATAACATAGTTGATTAAGTTGTTTGCATACTTTATATCAATATTTTTATTTTATGAATAATATGTCA
ATATGTTGTATGTTTGGATTGAGGGTCGTGCTTTTAATATCAAGTGTGATGAATTACATAAATTTAGTGTTATAAATGTTGAAATTTTGAGTATTAGAGTGTACTTCTAT
ATCCCTT
Protein sequenceShow/hide protein sequence
MACSSKIIVAAAAASPRLSLLLPHTHLFPFPNFGFRSSHWSAYEKNQEDQIWPTMVPNHLISRDLSEDYWVPHPETGVFGPPKAHHNSSTVPNDTSAGGNEGSVLNLKAW
FRHNGLEDLEKPHTL