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CSPI05G08230 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G08230
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionycf20-like protein
Genome locationChr5:6996427..6997665
RNA-Seq ExpressionCSPI05G08230
SyntenyCSPI05G08230
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007572 - Uncharacterised protein family Ycf20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579671.1 hypothetical protein SDJN03_24119, partial [Cucurbita argyrosperma subsp. sororia]1.5e-7291.67Show/hide
Query:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
        MAQSASLV T LLNY FTP+ N SYWRYDM+KSRPS PRS  +KAVQDTGGPRRLVDIIRLVPE+SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_004143642.1 uncharacterized protein ycf20 [Cucumis sativus]3.8e-81100Show/hide
Query:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
        MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_008467245.1 PREDICTED: uncharacterized protein ycf20 isoform X1 [Cucumis melo]1.2e-7796.79Show/hide
Query:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
        MAQS SLVHT LLNYGF+ KMN SYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_022969949.1 uncharacterized protein ycf20 [Cucurbita maxima]1.9e-7291.67Show/hide
Query:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
        MAQSASLV T LLNY FTP+ N SYWRYD++KSRPS PRS  +KAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_038874767.1 uncharacterized protein ycf20 [Benincasa hispida]8.5e-7394.23Show/hide
Query:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
        MAQSASLVHTSLLNYGFTPK    YWRYDM KSRPS PRS R+KAVQDT GPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

TrEMBL top hitse value%identityAlignment
A0A0A0KPS1 Uncharacterized protein1.9e-81100Show/hide
Query:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
        MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A1S3CT33 uncharacterized protein ycf20 isoform X15.6e-7896.79Show/hide
Query:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
        MAQS SLVHT LLNYGF+ KMN SYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A5D3BMH1 Ycf20-like protein isoform X17.3e-70100Show/hide
Query:  MNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
        MNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
Subjt:  MNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT

Query:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        RFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A6J1ESY7 uncharacterized protein ycf201.2e-7291.67Show/hide
Query:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
        MAQSASLV T LLNY FTP+ N SYWRYD++KSRPS PRS  +KAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A6J1I440 uncharacterized protein ycf209.2e-7391.67Show/hide
Query:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
        MAQSASLV T LLNY FTP+ N SYWRYD++KSRPS PRS  +KAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

SwissProt top hitse value%identityAlignment
P51214 Uncharacterized protein ycf203.4e-0847.44Show/hide
Query:  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS-RPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        G ISLL GF+++  +S   G  G   +IAA + V   E V++  YS + K    I LLNN K+G TYGLF+DAFKL S
Subjt:  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS-RPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

P72983 Ycf20-like protein1.2e-0835.24Show/hide
Query:  RLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR--PKVTFPIALLNNFKMGFTYGLFIDA
        RL  I+ +  +    +FR+P RR     +S L GF+V   ++ + G     DV+ A   +L  E V R++Y R          +LN FKMG +Y LF++A
Subjt:  RLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR--PKVTFPIALLNNFKMGFTYGLFIDA

Query:  FKLAS
        FKL S
Subjt:  FKLAS

Q1XDS2 Uncharacterized protein ycf202.4e-0942.27Show/hide
Query:  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPK-VTFPIALLNNFKMGFTYGLFIDAFKLAS
        L+  L+   + S S     G ISLL GF+++  +S   G  G   +IAA + V  TE  ++  YS  K +   I L NNFK+G TYGLF+DAFKL S
Subjt:  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPK-VTFPIALLNNFKMGFTYGLFIDAFKLAS

Q9MUL5 Uncharacterized protein ycf201.8e-0437.8Show/hide
Query:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR----PKVTFPIALL-----NNFKMGFTYGLFIDAFKLAS
        LL GF++A  ++  FG  G  DV+ A + V + E +    YS+     K  F I+ L     N  K+G  +GLF+DAFKL S
Subjt:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR----PKVTFPIALL-----NNFKMGFTYGLFIDAFKLAS

Arabidopsis top hitse value%identityAlignment
AT1G65420.1 Protein of unknown function (DUF565)1.1e-0435Show/hide
Query:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP-------KVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LL GFY A  ++   G  G  DV+ A + V   E +    Y +P       K+   +  +N +K G   GLF+DAFKL S
Subjt:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP-------KVTFPIALLNNFKMGFTYGLFIDAFKLAS

AT5G43050.1 Protein of unknown function (DUF565)2.6e-5169.38Show/hide
Query:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSF--RVKAVQDTGG--PRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISL
        MA S S + T+L +         S+  +  V S     R F   ++A+Q+T G  PRRL+DIIR VPE+SRNYF+ PSRR LFGGISLLGGFYVAQTISL
Subjt:  MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSF--RVKAVQDTGG--PRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISL

Query:  SFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        SFGALGVNDVIAAV+CVLLTEYVTRFYYSR  VTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  SFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAATCTGCAAGTTTAGTCCATACTAGCCTCTTAAATTATGGATTTACTCCTAAAATGAATCCTTCATATTGGAGATATGATATGGTTAAGTCACGACCTTCCCC
TCCTCGTAGCTTTCGTGTCAAAGCTGTGCAAGATACCGGAGGTCCTCGTAGGTTAGTTGATATCATTAGACTCGTGCCTGAGCTCTCGAGAAATTACTTTCGAAGTCCTT
CAAGGAGGGCTCTTTTTGGAGGAATCTCATTGTTGGGTGGCTTTTATGTGGCACAGACTATCTCATTGTCATTTGGCGCTTTAGGAGTAAATGATGTTATAGCTGCTGTG
GTATGCGTTCTCCTTACCGAGTATGTTACTCGATTTTATTACAGTCGACCAAAGGTAACTTTCCCCATTGCTCTACTGAACAACTTCAAAATGGGATTCACTTATGGTCT
TTTCATTGATGCTTTCAAACTTGCTAGTTAA
mRNA sequenceShow/hide mRNA sequence
GTTTTCTCTTGCTCCTCACTCCCAAAGCGGAACCTGGGAACCGAATTCTAGGTTCTCAACATTTTATCCAGTTGTATAGGAAGTGAAACCTTGAATGGCACAATCTGCAA
GTTTAGTCCATACTAGCCTCTTAAATTATGGATTTACTCCTAAAATGAATCCTTCATATTGGAGATATGATATGGTTAAGTCACGACCTTCCCCTCCTCGTAGCTTTCGT
GTCAAAGCTGTGCAAGATACCGGAGGTCCTCGTAGGTTAGTTGATATCATTAGACTCGTGCCTGAGCTCTCGAGAAATTACTTTCGAAGTCCTTCAAGGAGGGCTCTTTT
TGGAGGAATCTCATTGTTGGGTGGCTTTTATGTGGCACAGACTATCTCATTGTCATTTGGCGCTTTAGGAGTAAATGATGTTATAGCTGCTGTGGTATGCGTTCTCCTTA
CCGAGTATGTTACTCGATTTTATTACAGTCGACCAAAGGTAACTTTCCCCATTGCTCTACTGAACAACTTCAAAATGGGATTCACTTATGGTCTTTTCATTGATGCTTTC
AAACTTGCTAGTTAACAGCACGTGATGAAACCGTTCTGGTGGTAGCTACAGCATTTACATTTGTAAAGTTCTTTGAGCAATAATTTTGGTTTCTCTATATCTTTACAGCT
TGTTCTAATTCTTTTATGAACTTTTTTCCCCTTCCCCTCTTTTTTCTTCTGTATATTTTCAACATACGGTTTACATTGAAGAATTAAATGTTCTATTCACCCTCAAATTG
AATATAGTAACATATTTGAATGTAATTGATGAGTTTTAAGAGTTT
Protein sequenceShow/hide protein sequence
MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAV
VCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS