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CSPI05G08250 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G08250
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome locationChr5:7007114..7013282
RNA-Seq ExpressionCSPI05G08250
SyntenyCSPI05G08250
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143640.2 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis sativus]3.2e-9199.37Show/hide
Query:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGILKSIKDKGIGTFWRE+KEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_008467243.1 PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis melo]1.7e-8997.47Show/hide
Query:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGILKSIKDKGIGTFWRE+KEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKYYQ+VDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_022958111.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita moschata]7.8e-9097.47Show/hide
Query:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGI+KSIKDKGIGTFWRE+KEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_022996140.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita maxima]3.9e-8996.84Show/hide
Query:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGI+KSIKDKGIGTFWRE+KEEGYLKCLPDGNLLQTKIH IGATLVGVDKFGNKYYQK+DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_038875755.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Benincasa hispida]2.1e-9098.1Show/hide
Query:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGILKSIKDKGIGTFWRE+KEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ+VDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

TrEMBL top hitse value%identityAlignment
A0A0A0KNC9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.5e-9199.37Show/hide
Query:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGILKSIKDKGIGTFWRE+KEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A1S3CUD4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 128.4e-9097.47Show/hide
Query:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGILKSIKDKGIGTFWRE+KEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKYYQ+VDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A5A7ULJ6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 128.4e-9097.47Show/hide
Query:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGILKSIKDKGIGTFWRE+KEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKYYQ+VDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A6J1H155 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 123.8e-9097.47Show/hide
Query:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGI+KSIKDKGIGTFWRE+KEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A6J1K5W7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.9e-8996.84Show/hide
Query:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGI+KSIKDKGIGTFWRE+KEEGYLKCLPDGNLLQTKIH IGATLVGVDKFGNKYYQK+DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

SwissProt top hitse value%identityAlignment
Q0MQ85 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.5e-1141.49Show/hide
Query:  TLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS
        TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH ITD       +         HK N +G  E+ + +S
Subjt:  TLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS

Q0MQ86 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.6e-1140.43Show/hide
Query:  TLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS
        TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH +TD       +         HK N +G  E+ + +S
Subjt:  TLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS

Q54MV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.1e-1344.87Show/hide
Query:  TLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSG
        TLVGVDK GN+YY+  + +  YGRHRWVEY +    + + +PPE+H W+HH++D    E+L   P+ Y   H  N +G
Subjt:  TLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSG

Q9M9M9 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 123.4e-7276.28Show/hide
Query:  SVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD
        +V +  L++I++KG+G F R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+  +TQYGRHRWVEYA K RYNASQVP EWHGWLH ITD
Subjt:  SVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

Q9N2W7 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 123.8e-1539.73Show/hide
Query:  IGTFWREVKEEGYLKCLPDGNLLQ--TKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKG--RYNASQVPPEWHGWLHHITDHTGDELLMLK
        I  F + VKE G +K +     L   T++     TLVG D FGN+YY+  +      R+RWVE+ +K    Y+A+QVPPEWH WLHHIT    D+   +K
Subjt:  IGTFWREVKEEGYLKCLPDGNLLQ--TKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKG--RYNASQVPPEWHGWLHHITDHTGDELLMLK

Query:  P---SRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQP
        P     + +EHKEN S      IY  K +   P     T+ Q WQP
Subjt:  P---SRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQP

Arabidopsis top hitse value%identityAlignment
AT3G03100.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit2.4e-7376.28Show/hide
Query:  SVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD
        +V +  L++I++KG+G F R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+  +TQYGRHRWVEYA K RYNASQVP EWHGWLH ITD
Subjt:  SVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

AT3G03100.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit1.2e-7275.64Show/hide
Query:  SVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD
        +V +  L++I++KG+G F R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+  +TQYG HRWVEYA K RYNASQVP EWHGWLH ITD
Subjt:  SVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGGTGGTGCGGGGGATTCTGAAATCGATCAAAGACAAAGGGATCGGCACTTTCTGGCGAGAGGTCAAGGAAGAAGGCTACTTGAAATGCTTACCCGATGGAAA
TCTATTGCAAACAAAGATCCACAACATTGGTGCGACACTTGTGGGTGTTGATAAGTTTGGTAATAAATATTACCAGAAGGTTGATGAAGAGACTCAATATGGTAGGCACA
GGTGGGTTGAATATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCCGAATGGCATGGCTGGCTCCACCACATAACTGATCATACAGGAGACGAGCTTCTGATG
CTGAAACCAAGCAGATATGGAATTGAACATAAGGAGAACTTTTCCGGGGAAGGTGAAGAACTTATCTACCATTCCAAGGGACATGCTCTTAATCCTGGACAGAGAGATTG
GACTCGATACCAATCATGGCAACCAACCAAATCATAA
mRNA sequenceShow/hide mRNA sequence
AATTTTTTTGAGGGATAAACATTTGGTGAAAGATTGTATTTTTGACAAAGTTTCTATTTGTTATTATTTGTTTGATAAGTTTTTCCCTTATTTTTCATCTAAAGTCCCCA
ATAAGACGATTTTACCCTCACCATCCCGACGGCAGCTGCTTAAACTGAAAAGAAAACAACCAATCTGATTTATTACTCGTGTGAGCAAACAACACCGATCGGAGAAATGG
CGTCGGTGGTGCGGGGGATTCTGAAATCGATCAAAGACAAAGGGATCGGCACTTTCTGGCGAGAGGTCAAGGAAGAAGGCTACTTGAAATGCTTACCCGATGGAAATCTA
TTGCAAACAAAGATCCACAACATTGGTGCGACACTTGTGGGTGTTGATAAGTTTGGTAATAAATATTACCAGAAGGTTGATGAAGAGACTCAATATGGTAGGCACAGGTG
GGTTGAATATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCCGAATGGCATGGCTGGCTCCACCACATAACTGATCATACAGGAGACGAGCTTCTGATGCTGA
AACCAAGCAGATATGGAATTGAACATAAGGAGAACTTTTCCGGGGAAGGTGAAGAACTTATCTACCATTCCAAGGGACATGCTCTTAATCCTGGACAGAGAGATTGGACT
CGATACCAATCATGGCAACCAACCAAATCATAAGTAATTTGTCTTTCAACAATCCCTTTGTTCAATTTGGAAATCCTTGGGATATTGGTTTGTCTTTTTTCCTTTCTTCT
GAATAAGAGACTTGTTGTCTATACAAGCTGTGAATTATTTTTCATTATGCTTTACTGCACAACAGATGGAGGAATTTTCAGCATGGTACTGATTTTCTAAGTTTTAACAA
ATTCATTGTTGTGCTAATCTCCTGTCAAATTCTGTTCTTTTGGTGCCATGTAAAATGTTATATCTTGTTAGCAGCTACTATGATAGAATGATATATCATTTCAGTGTGTT
TTAGATGTAATCAGCTTTGGTCTTCGGCCATTCCTATAATGAAAGCTAAGTAATATTTTGTGT
Protein sequenceShow/hide protein sequence
MASVVRGILKSIKDKGIGTFWREVKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLM
LKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS