; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G08850 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G08850
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationChr5:7517188..7519693
RNA-Seq ExpressionCSPI05G08850
SyntenyCSPI05G08850
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034049.1 putative RNA-binding protein ARP1 isoform X1 [Cucumis melo var. makuwa]2.6e-13896.17Show/hide
Query:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTT   NS+TNAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSN GGPRTT+AATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  -AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG
         AMVG NTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG
Subjt:  -AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG

XP_004143608.1 probable RNA-binding protein ARP1 isoform X1 [Cucumis sativus]7.3e-14999.62Show/hide
Query:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTT NNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGGRG
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGGRG
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGGRG

XP_008445852.2 PREDICTED: probable RNA-binding protein ARP1 isoform X1 [Cucumis melo]3.0e-14296.63Show/hide
Query:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTT   NS+TNAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSN GGPRTT+AATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  -AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGGRG
         AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGGRG
Subjt:  -AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGGRG

XP_011654915.1 probable RNA-binding protein ARP1 isoform X2 [Cucumis sativus]8.3e-14599.61Show/hide
Query:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTT NNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP

XP_038891949.1 probable RNA-binding protein ARP1 isoform X1 [Benincasa hispida]1.8e-13994.7Show/hide
Query:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMM+TTT +NN+  NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSN GGPRTTSA   PGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGG
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPP+SIMSKP +VGPNPGTVGG
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGG

TrEMBL top hitse value%identityAlignment
A0A0A0KNL6 RRM domain-containing protein3.5e-14999.62Show/hide
Query:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTT NNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGGRG
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGGRG
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGGRG

A0A1S3BD62 probable RNA-binding protein ARP1 isoform X21.6e-13896.54Show/hide
Query:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTT   NS+TNAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSN GGPRTT+AATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  -AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP
         AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP
Subjt:  -AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP

A0A1S3BEI0 probable RNA-binding protein ARP1 isoform X11.4e-14296.63Show/hide
Query:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTT   NS+TNAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSN GGPRTT+AATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  -AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGGRG
         AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGGRG
Subjt:  -AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGGRG

A0A5A7SY01 Putative RNA-binding protein ARP1 isoform X11.3e-13896.17Show/hide
Query:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTT   NS+TNAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSN GGPRTT+AATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  -AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG
         AMVG NTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG
Subjt:  -AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG

A0A6J1FUE8 probable RNA-binding protein ARP1 isoform X11.7e-11988.54Show/hide
Query:  SSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRS
        S+ NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR GSRS
Subjt:  SSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRS

Query:  ASATPPQAPQ-PGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANTLMPM
        ASATPPQAPQ PGSN GGPRTTSA +  GNHVQWYYPAGT+PT F HQPHQ VPFYGYSPSPTYIATDISYNHK+GYMNGHY Q+YPGQAMVGANTLMPM
Subjt:  ASATPPQAPQ-PGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANTLMPM

Query:  YPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGG
        YPLYHYHQSHAMGMPAHI+PPSPT     AAVPP+SIMSKP +V P PG VGG
Subjt:  YPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGG

SwissProt top hitse value%identityAlignment
Q5ZJX4 RNA-binding protein 381.2e-2156.47Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +F  FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q5ZMA3 RNA-binding protein 244.6e-2150.49Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP
        DTT TK+FVGGL + T   ++R +F  FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+           P+  
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP

Query:  QPG
        QPG
Subjt:  QPG

Q6GQD3 RNA-binding protein 24-A4.6e-2150.49Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP
        DTT TK+FVGGL + T   ++R +F  FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+           P+  
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP

Query:  QPG
        QPG
Subjt:  QPG

Q9I8B3 RNA-binding protein 24-B4.6e-2150.49Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP
        DTT TK+FVGGL + T   ++R +F  FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+           P+  
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP

Query:  QPG
        QPG
Subjt:  QPG

Q9M1S3 Probable RNA-binding protein ARP18.9e-5750.88Show/hide
Query:  TTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR
        TT+NN +   G FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R 
Subjt:  TTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR

Query:  GGSRSASATPPQAPQPGSNAGGPRTTSAATAP--GNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP--
           +S + T PQ         GP+  + AT P  GNH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P  
Subjt:  GGSRSASATPPQAPQPGSNAGGPRTTSAATAP--GNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP--

Query:  ----------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGG
                        G+ MVG A+ ++P Y +Y YHQS A+G       P P+ + P +   P           P  GTVGG
Subjt:  ----------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGG

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-3541.39Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA
        GDTT TKVFVGGLAWET KE M+ HF +FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +R        + P  
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA

Query:  PQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMYP
        P  G   GG               +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P YP
Subjt:  PQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMYP

Query:  LYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGP
            H       P   F    ++  P    PPT  M +  T  P
Subjt:  LYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGP

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-3541.39Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA
        GDTT TKVFVGGLAWET KE M+ HF +FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +R        + P  
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA

Query:  PQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMYP
        P  G   GG               +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P YP
Subjt:  PQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMYP

Query:  LYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGP
            H       P   F    ++  P    PPT  M +   V P
Subjt:  LYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGP

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein6.8e-3641.7Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA
        GDTT TKVFVGGLAWET KE M+ HF +FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +R        + P  
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA

Query:  PQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY-
        P  G   GG               +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P Y 
Subjt:  PQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY-

Query:  --------------PLYHYHQSHAMGMPAHIFPPS
                      P YH+  S+    P H  PP+
Subjt:  --------------PLYHYHQSHAMGMPAHIFPPS

AT3G54770.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.3e-5850.88Show/hide
Query:  TTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR
        TT+NN +   G FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R 
Subjt:  TTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR

Query:  GGSRSASATPPQAPQPGSNAGGPRTTSAATAP--GNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP--
           +S + T PQ         GP+  + AT P  GNH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P  
Subjt:  GGSRSASATPPQAPQPGSNAGGPRTTSAATAP--GNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP--

Query:  ----------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGG
                        G+ MVG A+ ++P Y +Y YHQS A+G       P P+ + P +   P           P  GTVGG
Subjt:  ----------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGG

AT3G54770.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.8e-4446.56Show/hide
Query:  MRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGN
        M DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R        ATPP                     GN
Subjt:  MRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGN

Query:  HVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP------------------GQAMVG-ANTLMPMYPLYHY
        H QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P                  G+ MVG A+ ++P Y +Y Y
Subjt:  HVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP------------------GQAMVG-ANTLMPMYPLYHY

Query:  HQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGG
        HQS A+G       P P+ + P +   P           P  GTVGG
Subjt:  HQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGATGATGACCACCACCACCACCAACAACAACAGTAGTACCAATGCAGGTTTGTTCGGCGATACCACTTTGACGAAAGTCTTCGTTGGTGGGTTAGCTTGGGAAAC
ACCAAAGGAAGCCATGAGAGATCACTTCCACAAGTTCGGTGAAATTCTCGAAGCGGTTATCATCTCTGATAAACTCACCGGCAGATCCAAGGGATATGGATTCGTTACAT
TCAAAGACGCGGAATCCGCGAAGAAAGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGTCGAGCTAACTGTAATCTCGCTTCACTTGGAGCTCGGCGCGGCGGTTCT
AGGTCGGCTTCCGCTACTCCTCCTCAAGCTCCTCAACCAGGATCCAACGCTGGAGGACCGAGAACGACATCAGCAGCAACCGCACCGGGAAATCATGTGCAGTGGTATTA
CCCGGCGGGGACTCATCCAACGCCGTTTCATCATCAGCCTCATCAACCCGTCCCTTTTTATGGATATTCCCCAAGCCCCACATACATCGCAACCGATATCAGTTACAACC
ACAAATTGGGGTATATGAACGGGCACTACACACAAATGTATCCAGGGCAGGCTATGGTAGGAGCGAACACATTGATGCCAATGTACCCGCTGTATCATTACCATCAATCA
CACGCCATGGGGATGCCGGCCCACATCTTCCCTCCTAGTCCCACGACGGCGGGCCCATTTGCCGCTGTCCCACCCACTTCCATTATGTCCAAACCAACTACCGTTGGTCC
CAACCCAGGTACAGTTGGAGGCAGGGGATGA
mRNA sequenceShow/hide mRNA sequence
GATAGCCTTGAGCAATTGCCTATCTGTCAGCCTCTCTGTCTCTCTGTCTTCTTCCATTTCTTTATTTCCATACCACTCTGTTTCTTCACAACACTTCTCTTTATTTAACC
TTCTTCTTCTCTTCATCACCACCATTTTTCCTCCCATTTTAACTTAACTACTTCTAATTACTTCCTCATTAGCTGTTTTGTTCCATGACGATGATGACCACCACCACCAC
CAACAACAACAGTAGTACCAATGCAGGTTTGTTCGGCGATACCACTTTGACGAAAGTCTTCGTTGGTGGGTTAGCTTGGGAAACACCAAAGGAAGCCATGAGAGATCACT
TCCACAAGTTCGGTGAAATTCTCGAAGCGGTTATCATCTCTGATAAACTCACCGGCAGATCCAAGGGATATGGATTCGTTACATTCAAAGACGCGGAATCCGCGAAGAAA
GCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGTCGAGCTAACTGTAATCTCGCTTCACTTGGAGCTCGGCGCGGCGGTTCTAGGTCGGCTTCCGCTACTCCTCCTCA
AGCTCCTCAACCAGGATCCAACGCTGGAGGACCGAGAACGACATCAGCAGCAACCGCACCGGGAAATCATGTGCAGTGGTATTACCCGGCGGGGACTCATCCAACGCCGT
TTCATCATCAGCCTCATCAACCCGTCCCTTTTTATGGATATTCCCCAAGCCCCACATACATCGCAACCGATATCAGTTACAACCACAAATTGGGGTATATGAACGGGCAC
TACACACAAATGTATCCAGGGCAGGCTATGGTAGGAGCGAACACATTGATGCCAATGTACCCGCTGTATCATTACCATCAATCACACGCCATGGGGATGCCGGCCCACAT
CTTCCCTCCTAGTCCCACGACGGCGGGCCCATTTGCCGCTGTCCCACCCACTTCCATTATGTCCAAACCAACTACCGTTGGTCCCAACCCAGGTACAGTTGGAGGCAGGG
GATGAAGAAGATGCTGATGATGCATGGTAAAAGAAGAGCAGATAGAAGAATTTTAAGTATAAAAATGGGGAGAGGGCAGGCTAAGAGGGACTATTTTTTTTAATTTATTT
TTTTCTTTTTTAAATTTTTAATCAGAACATCTCATTCTCTTAGTACATGGCAGGCAAGAAAGAAAGAAGAACAAAAAAAAAAAGAAAAGAAAAATAACAGAGACAATGTG
AAGCTGGTTGGGGGGGCTGCTCAGAACTACATTATTTTTAGGCTGATCTGTTGTAGCTCTTTATTTATTTCTTTCTTCTTTTAATTATAAAAAACTAATTTTATTGTTTT
TTTCCCTCTCCATTCTTCTCCCCTATCATTTCCACAAACCAACACCTCTCTATATTACTTTCTATCTCGGTACTTTCGACCAC
Protein sequenceShow/hide protein sequence
MTMMTTTTTNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGS
RSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQS
HAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGTVGGRG