; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G10100 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G10100
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr5:8565955..8568503
RNA-Seq ExpressionCSPI05G10100
SyntenyCSPI05G10100
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464896.1 PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucumis melo]5.3e-14795.56Show/hide
Query:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLV HG+STGFDALVPKIDCIYYHNK  F P+SVICVHNQAAQP TSFTTPERRVVKKVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
Subjt:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
        KIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQE+NRKMVYKRYSCQWKYIHFKGERVRVR+DGWDED Q
Subjt:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ

XP_011654973.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucumis sativus]7.2e-15298.89Show/hide
Query:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLVFHGTSTGFDAL+PKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
Subjt:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
        KIIEIFADMEELGVKPDEDTVRRV  AFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
Subjt:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ

XP_022139301.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia]4.1e-13186.94Show/hide
Query:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        M V+ GTS GFD LVPK DCI   NK TF  +S  C HNQA QP TS  T ERR+VKKVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG L
Subjt:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRSISK++FSRMISLY+HHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDED
        K+IEIFADMEELGVKPDEDTVRRV RAFQKLGQE+NRKMV+KRY C+WKYIHFKGERVRV+RDGWDED
Subjt:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDED

XP_031740922.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Cucumis sativus]1.3e-14897.78Show/hide
Query:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLVFHGTSTGFDAL+PKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNL   VSQCPNEKEAVYGEL
Subjt:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
        KIIEIFADMEELGVKPDEDTVRRV  AFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
Subjt:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ

XP_038892676.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Benincasa hispida]5.2e-13489.55Show/hide
Query:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLV+HG+STGFDALVPKIDCIY++NK TF  +SV CVH QA          ERR+VKKVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
Subjt:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWK VIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKR+FSRMISLYEHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDED
        KIIEIFADMEELGVKPDEDTVRRVGRAF KLGQE+N+KMVYKRY CQWKYIHFKGERVRVRRDGWDED
Subjt:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDED

TrEMBL top hitse value%identityAlignment
A0A0A0KSA5 Uncharacterized protein3.5e-15298.89Show/hide
Query:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLVFHGTSTGFDAL+PKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
Subjt:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
        KIIEIFADMEELGVKPDEDTVRRV  AFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
Subjt:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ

A0A1S3CP50 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X12.6e-14795.56Show/hide
Query:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLV HG+STGFDALVPKIDCIYYHNK  F P+SVICVHNQAAQP TSFTTPERRVVKKVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
Subjt:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
        KIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQE+NRKMVYKRYSCQWKYIHFKGERVRVR+DGWDED Q
Subjt:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ

A0A5A7UD21 Pentatricopeptide repeat-containing protein2.6e-14795.56Show/hide
Query:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLV HG+STGFDALVPKIDCIYYHNK  F P+SVICVHNQAAQP TSFTTPERRVVKKVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
Subjt:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
        KIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQE+NRKMVYKRYSCQWKYIHFKGERVRVR+DGWDED Q
Subjt:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ

A0A6J1CC95 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X12.0e-13186.94Show/hide
Query:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        M V+ GTS GFD LVPK DCI   NK TF  +S  C HNQA QP TS  T ERR+VKKVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG L
Subjt:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRSISK++FSRMISLY+HHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDED
        K+IEIFADMEELGVKPDEDTVRRV RAFQKLGQE+NRKMV+KRY C+WKYIHFKGERVRV+RDGWDED
Subjt:  KIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDED

A0A6J1FWG3 pentatricopeptide repeat-containing protein At4g18975, chloroplastic2.6e-13187.36Show/hide
Query:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVV-KKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        ML + G+STGFDALVPK  CIY +NK  F  +SV CVH QAAQ LT  TT ERR+V KKVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVV-KKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKR+FSRMISLY+HHDLQ
Subjt:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQ

Query:  DKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDED
        DKIIEIFADMEELGV+PDEDTVRRV  AF+KLGQE+N KMVYKRY C+WKYIHFKGERVRVRRDGWDED
Subjt:  DKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDED

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic3.9e-9275.59Show/hide
Query:  TPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF++L QE+NRK++ +RY  ++K
Subjt:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWK

Query:  YIHFKGERVRVRR
        YI+F GERVRV+R
Subjt:  YIHFKGERVRVRR

Q8LG95 Pentatricopeptide repeat-containing protein At4g211901.1e-4647.21Show/hide
Query:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE
        +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+   KAL IL    +WK++IQV KWMLSKGQG TMGTY +LL A   D R+DE
Subjt:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE

Query:  AESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRY-SCQWKYIHFKGERVRVR
        AE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  VG+ F KL  +D  + + K+Y   QW++ + KG RV+V+
Subjt:  AESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRY-SCQWKYIHFKGERVRVR

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein2.8e-9375.59Show/hide
Query:  TPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF++L QE+NRK++ +RY  ++K
Subjt:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWK

Query:  YIHFKGERVRVRR
        YI+F GERVRV+R
Subjt:  YIHFKGERVRVRR

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein2.8e-9375.59Show/hide
Query:  TPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF++L QE+NRK++ +RY  ++K
Subjt:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWK

Query:  YIHFKGERVRVRR
        YI+F GERVRV+R
Subjt:  YIHFKGERVRVRR

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein2.8e-9375.59Show/hide
Query:  TPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF++L QE+NRK++ +RY  ++K
Subjt:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWK

Query:  YIHFKGERVRVRR
        YI+F GERVRV+R
Subjt:  YIHFKGERVRVRR

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein2.8e-9375.59Show/hide
Query:  TPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF++L QE+NRK++ +RY  ++K
Subjt:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRYSCQWK

Query:  YIHFKGERVRVRR
        YI+F GERVRV+R
Subjt:  YIHFKGERVRVRR

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein7.9e-4847.21Show/hide
Query:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE
        +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+   KAL IL    +WK++IQV KWMLSKGQG TMGTY +LL A   D R+DE
Subjt:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE

Query:  AESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRY-SCQWKYIHFKGERVRVR
        AE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  VG+ F KL  +D  + + K+Y   QW++ + KG RV+V+
Subjt:  AESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEDNRKMVYKRY-SCQWKYIHFKGERVRVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTTTTCCATGGAACCTCAACTGGCTTCGATGCCCTCGTGCCAAAGATAGATTGCATTTACTATCACAACAAGTTCACATTTACACCTTCCAGCGTCATTTGTGT
TCACAACCAAGCTGCACAGCCCCTTACTAGTTTCACCACACCTGAGAGACGTGTTGTTAAGAAGGTTGGGAAGGAGACACACCATTTATGGAAGAAAAGAGATTCTGCTG
GCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTT
CCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGCGTGTCATTCAAGTGGCAAAGTGGATGTTAAGCAAGGGCCAAGGAGCCACAAT
GGGAACATACGACACCCTTCTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTGTGGAACATGATATTGCATACACATACACGTTCCATCTCTAAGC
GAGTATTTTCTAGGATGATCTCTTTGTACGAACATCATGACTTGCAAGATAAGATTATTGAGATATTTGCAGACATGGAAGAATTGGGTGTAAAACCAGATGAAGATACC
GTAAGAAGAGTCGGTCGTGCCTTTCAAAAACTAGGTCAAGAAGATAACCGGAAAATGGTCTATAAAAGATACAGCTGCCAATGGAAATACATACACTTCAAGGGTGAGAG
GGTTAGAGTGAGAAGAGATGGATGGGATGAAGATTATCAATGA
mRNA sequenceShow/hide mRNA sequence
CCAATTTACTAAAACATCATGTATATAGTTAAATAAATGAAGGCAAACTACTATAATCCACTCGTTGCCCCCAAACGTCCTTATATATTTTCTTGACTTTCTCAGTTCAC
GATTAGATTTGCCTGCGCCGCTGGATACCTTCCCCTGACCAAAGCTCTAGCTTCTTACTCCACGACCACCAACCCATGTTTGTTTCATAAACAGAATGCCAAGTTTCATT
AAACTCGATACCCATTACATAGAGCGCTGAAATTTCAATTTTTCTGATGTTGGTTTTCCATGGAACCTCAACTGGCTTCGATGCCCTCGTGCCAAAGATAGATTGCATTT
ACTATCACAACAAGTTCACATTTACACCTTCCAGCGTCATTTGTGTTCACAACCAAGCTGCACAGCCCCTTACTAGTTTCACCACACCTGAGAGACGTGTTGTTAAGAAG
GTTGGGAAGGAGACACACCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGC
TGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTTCCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGCGTGTCA
TTCAAGTGGCAAAGTGGATGTTAAGCAAGGGCCAAGGAGCCACAATGGGAACATACGACACCCTTCTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCCGAATCC
TTGTGGAACATGATATTGCATACACATACACGTTCCATCTCTAAGCGAGTATTTTCTAGGATGATCTCTTTGTACGAACATCATGACTTGCAAGATAAGATTATTGAGAT
ATTTGCAGACATGGAAGAATTGGGTGTAAAACCAGATGAAGATACCGTAAGAAGAGTCGGTCGTGCCTTTCAAAAACTAGGTCAAGAAGATAACCGGAAAATGGTCTATA
AAAGATACAGCTGCCAATGGAAATACATACACTTCAAGGGTGAGAGGGTTAGAGTGAGAAGAGATGGATGGGATGAAGATTATCAATGATAGATACATTAACATGAACAA
GTTCATAAGGTATCTGTCTACTGATCCCCATTAATTATATGCGCTTAAGCACACTGAAACAGAGATTTGCAGTCTATTTTGTCCCTTTGCTCTGAATATTTAGAACAACT
ACTAACAGAGAAAATGTAAAGATTGTAAGTTCTGAAGAAAAATAGTGTATATATTAACCAAAAGACGTCATCTATAACGTTTGCAGTAAGCTGTTCCAGATTTTCTTTTA
GGCTTGGATTATTTTCATCGGGAC
Protein sequenceShow/hide protein sequence
MLVFHGTSTGFDALVPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEF
PLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDT
VRRVGRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ