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CSPI05G10130 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G10130
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTubby-like F-box protein
Genome locationChr5:8606178..8608156
RNA-Seq ExpressionCSPI05G10130
SyntenyCSPI05G10130
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009620 - response to fungus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0009536 - plastid (cellular component)
InterPro domainsIPR000007 - Tubby, C-terminal
IPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like
IPR025659 - Tubby-like, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3000907.1 tubby-like F-box 8 [Olea europaea subsp. europaea]4.5e-1184.78Show/hide
Query:  RALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR
        RALL+ENGKFLLSAK TRRTT TEY+ISMGA+NI RSSS+YIGKLR
Subjt:  RALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR

KAE8648008.1 hypothetical protein Csa_021407 [Cucumis sativus]6.1e-32100Show/hide
Query:  MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAMVTFV
        MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAMVTFV
Subjt:  MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAMVTFV

KAG0496935.1 hypothetical protein HPP92_001626 [Vanilla planifolia]4.5e-1175Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAMVTFV
        RW+IEV GA GTL ANETYQLQVDFPEHYPME PQVI F    LCI+I IAMV  V
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAMVTFV

XP_022922930.1 tubby-like F-box protein 8 [Cucurbita moschata]4.5e-1191.11Show/hide
Query:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR
        ALL+ENGKFLLSAK TRRTTSTEYIISM AENI RSSSSYIGKLR
Subjt:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR

XP_031741252.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial-like [Cucumis sativus]2.5e-4699Show/hide
Query:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAMVTFV
        ALLIENGKFLLS KPTRRTTSTEYIISMGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAMVTFV
Subjt:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAMVTFV

TrEMBL top hitse value%identityAlignment
A0A0A0KLZ5 UBC core domain-containing protein5.5e-5595.16Show/hide
Query:  LKRVLRLSAPPLFTAIRYLELRIRALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPME
        L  VLRLSAPPLFTAIR LELRIRALLIENGKFLLS KPTRRTTSTEYIISMGAENILRSSSSYIGKLRWVIEVNGA GTL ANETYQLQVDFPEHYPME
Subjt:  LKRVLRLSAPPLFTAIRYLELRIRALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPME

Query:  TPQVIYFCIQLLCIIISIAMVTFV
        TPQVIYFCIQLLCIIISIAMVTFV
Subjt:  TPQVIYFCIQLLCIIISIAMVTFV

A0A0A0L6H9 Tubby-like F-box protein2.2e-1191.11Show/hide
Query:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR
        ALL+ENGKFLLSAK TRRTTSTEYIISM AENI RSSSSYIGKLR
Subjt:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR

A0A5A7TCI5 Tubby-like F-box protein2.2e-1191.11Show/hide
Query:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR
        ALL+ENGKFLLSAK TRRTTSTEYIISM AENI RSSSSYIGKLR
Subjt:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR

A0A6J1E5G8 Tubby-like F-box protein2.2e-1191.11Show/hide
Query:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR
        ALL+ENGKFLLSAK TRRTTSTEYIISM AENI RSSSSYIGKLR
Subjt:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR

A0A6J1J9K7 Tubby-like F-box protein2.2e-1191.11Show/hide
Query:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR
        ALL+ENGKFLLSAK TRRTTSTEYIISM AENI RSSSSYIGKLR
Subjt:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR

SwissProt top hitse value%identityAlignment
O23239 Probable ubiquitin-conjugating enzyme E2 171.6e-1178.95Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        RW+IEV+G  GTL ANETYQLQV+FPEHYPME PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

P42743 Ubiquitin-conjugating enzyme 151.0e-1073.68Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        +W I+V GA GTL ANETYQLQV+FPEHYPME PQV++
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

Q9FMM0 Probable ubiquitin-conjugating enzyme E2 181.0e-1076.32Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        +WVIEV GA GTL ANETY LQV+FP+HYPME PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

Q9FRH7 Tubby-like F-box protein 101.9e-1282.22Show/hide
Query:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR
        ALL+ENGKFLLSAK TRRTT TEYIISM A+NI RSS+SY+GKLR
Subjt:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR

Q9FWT2 Probable ubiquitin-conjugating enzyme E2 169.5e-1281.58Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        RW+IEV GA GTL AN+TYQLQVDFPEHYPME+PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

Arabidopsis top hitse value%identityAlignment
AT1G25280.1 tubby like protein 101.4e-1382.22Show/hide
Query:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR
        ALL+ENGKFLLSAK TRRTT TEYIISM A+NI RSS+SY+GKLR
Subjt:  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR

AT1G45050.1 Ubiquitin-conjugating enzyme family protein7.4e-1273.68Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        +W I+V GA GTL ANETYQLQV+FPEHYPME PQV++
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

AT1G75440.1 ubiquitin-conjugating enzyme 166.7e-1381.58Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        RW+IEV GA GTL AN+TYQLQVDFPEHYPME+PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

AT4G36410.1 ubiquitin-conjugating enzyme 171.1e-1278.95Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        RW+IEV+G  GTL ANETYQLQV+FPEHYPME PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

AT5G42990.1 ubiquitin-conjugating enzyme 187.4e-1276.32Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        +WVIEV GA GTL ANETY LQV+FP+HYPME PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTGGATTATACTCGAGGTTCGATCTCGGAGAAGTTGTACTCAGGGAAATGCTACAACTACATCGAAATGAAGCTTGCTATTATGGGCTCTTATATAACCTTTAT
GCTTCAAATGGAAAATGGGGTGAAGTTAAAAAGGGTTCTTCGTCTATCAGCTCCTCCTCTCTTTACTGCTATTAGATACTTGGAGCTAAGGATTCGAGCTCTGCTGATTG
AAAATGGGAAGTTTCTTCTTTCAGCAAAGCCTACACGAAGAACTACTAGCACGGAGTATATTATCTCAATGGGTGCCGAAAACATTTTGAGATCAAGTAGCTCTTACATT
GGAAAACTGAGGTGGGTGATTGAAGTCAACGGTGCCCTGGGAACTCTCTGTGCTAATGAAACCTATCAGCTTCAGGTCGACTTTCCTGAGCATTACCCAATGGAAACCCC
ACAGGTTATATATTTCTGCATCCAGCTCCTCTGCATCATCATATCTATAGCAATGGTCACATTTGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGTGGATTATACTCGAGGTTCGATCTCGGAGAAGTTGTACTCAGGGAAATGCTACAACTACATCGAAATGAAGCTTGCTATTATGGGCTCTTATATAACCTTTAT
GCTTCAAATGGAAAATGGGGTGAAGTTAAAAAGGGTTCTTCGTCTATCAGCTCCTCCTCTCTTTACTGCTATTAGATACTTGGAGCTAAGGATTCGAGCTCTGCTGATTG
AAAATGGGAAGTTTCTTCTTTCAGCAAAGCCTACACGAAGAACTACTAGCACGGAGTATATTATCTCAATGGGTGCCGAAAACATTTTGAGATCAAGTAGCTCTTACATT
GGAAAACTGAGGTGGGTGATTGAAGTCAACGGTGCCCTGGGAACTCTCTGTGCTAATGAAACCTATCAGCTTCAGGTCGACTTTCCTGAGCATTACCCAATGGAAACCCC
ACAGGTTATATATTTCTGCATCCAGCTCCTCTGCATCATCATATCTATAGCAATGGTCACATTTGTCTAG
Protein sequenceShow/hide protein sequence
MDVDYTRGSISEKLYSGKCYNYIEMKLAIMGSYITFMLQMENGVKLKRVLRLSAPPLFTAIRYLELRIRALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYI
GKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAMVTFV