; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G10320 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G10320
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description60S ribosomal protein L35a-1
Genome locationChr5:8754942..8757278
RNA-Seq ExpressionCSPI05G10320
SyntenyCSPI05G10320
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015031 - protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001780 - Ribosomal protein L35A
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR018266 - Ribosomal protein L35Ae, conserved site
IPR038661 - Ribosomal protein L35A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463199.1 PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo]7.3e-58100Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

XP_022139205.1 60S ribosomal protein L35a-1-like [Momordica charantia]2.3e-5696.43Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGR+GERVRLY RGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

XP_022156899.1 60S ribosomal protein L35a-1 [Momordica charantia]1.8e-5697.32Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGR+GERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

XP_022957040.1 60S ribosomal protein L35a-1 [Cucurbita moschata]3.6e-5799.11Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

XP_038891868.1 60S ribosomal protein L35a-1 [Benincasa hispida]2.1e-5799.11Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKV RPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

TrEMBL top hitse value%identityAlignment
A0A0A0KM11 Uncharacterized protein3.5e-58100Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

A0A1S3CIN8 60S ribosomal protein L35a-13.5e-58100Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

A0A5A7T1I6 Ribosomal protein L35A3.5e-58100Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

A0A6J1GZF1 60S ribosomal protein L35a-11.8e-5799.11Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

A0A6J1IM24 60S ribosomal protein L35a-1-like1.8e-5799.11Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

SwissProt top hitse value%identityAlignment
P41056 60S ribosomal protein L33-B4.1e-2754.29Show/hide
Query:  ERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFM
        E  RLY +G  L Y+RSK    PN SL++IEGV +  E  +Y GKR+AY+Y+A  +  GS  R +WGKV R HGNSG+VRA F++NLP K+ G  VR+F+
Subjt:  ERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFM

Query:  YPSNI
        YPSNI
Subjt:  YPSNI

P51422 60S ribosomal protein L35a-41.1e-5386.49Show/hide
Query:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD
        +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD

Query:  RVRVFMYPSNI
        RVRVFMYPSNI
Subjt:  RVRVFMYPSNI

Q9C912 60S ribosomal protein L35a-34.6e-5588.39Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKAK KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
         RVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

Q9FZH0 60S ribosomal protein L35a-28.7e-5486.49Show/hide
Query:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD
        +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD

Query:  RVRVFMYPSNI
        RVRVFMYPSNI
Subjt:  RVRVFMYPSNI

Q9LMK0 60S ribosomal protein L35a-14.6e-5588.39Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKAK KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
         RVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

Arabidopsis top hitse value%identityAlignment
AT1G07070.1 Ribosomal protein L35Ae family protein3.3e-5688.39Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKAK KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
         RVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

AT1G41880.1 Ribosomal protein L35Ae family protein6.2e-5586.49Show/hide
Query:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD
        +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD

Query:  RVRVFMYPSNI
        RVRVFMYPSNI
Subjt:  RVRVFMYPSNI

AT1G74270.1 Ribosomal protein L35Ae family protein3.3e-5688.39Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKAK KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
         RVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

AT3G55750.1 Ribosomal protein L35Ae family protein8.1e-5586.49Show/hide
Query:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD
        +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD

Query:  RVRVFMYPSNI
        RVRVFMYPSNI
Subjt:  RVRVFMYPSNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGGGAAGGCAAGGAGAGAGAGTCAGACTCTACACCAGGGGAACAATTCTCGGCTACAAGAGGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGAT
CGAGGGTGTTAATTCTAAGGATGAGGTTTCTTGGTACCAAGGGAAACGATTGGCATATATTTACAAGGCTAAAGTGAAGAAAAATGGATCCCATTATCGTTGCATTTGGG
GCAAAGTAGCAAGACCTCATGGTAACAGTGGCATCGTTAGAGCGAAGTTCAAGTCTAATCTCCCACCAAAGTCCATGGGTGACAGGGTCAGAGTATTCATGTACCCCAGC
AACATTTGA
mRNA sequenceShow/hide mRNA sequence
CTCATCGGCCGTCAAACACTCCATAGCTGAAGCAGAAACCCGCCGAAGATGGTGAAGGGAAGGCAAGGAGAGAGAGTCAGACTCTACACCAGGGGAACAATTCTCGGCTA
CAAGAGGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCTAAGGATGAGGTTTCTTGGTACCAAGGGAAACGATTGGCATATATTT
ACAAGGCTAAAGTGAAGAAAAATGGATCCCATTATCGTTGCATTTGGGGCAAAGTAGCAAGACCTCATGGTAACAGTGGCATCGTTAGAGCGAAGTTCAAGTCTAATCTC
CCACCAAAGTCCATGGGTGACAGGGTCAGAGTATTCATGTACCCCAGCAACATTTGAGCCTGGAGAACGGGATTGAAACAAGTGTTCGCTACATGAAGGGATTTAAATTT
TTATTATATTTTGTGAGCTAAGATAGAAGCATTTTACGTTTCTGAACTGAGTCATTTTTTGCTGTTTAGGTAATGTTTAACACCCGAGTAGTTAAAACAGAATTATAGAA
CCATTTGTGTTGAGGATTGTCATGTGTTTAAGCCAATTGCACTTCTATCAAGTGGTTTTTCCGTATTAAAAGTCTCTATGCACATGCACTTCTTTAGCTATTATGAAGTC
AGATTATGATTCTTATCGTAATTCTTTGGCTATCCTTTCTATACCACTTATGTGATTCACGTCATGACCTGACCTCTTGCTTGCAAA
Protein sequenceShow/hide protein sequence
MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPS
NI