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CSPI05G10910 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G10910
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionsister chromatid cohesion 1 protein 1
Genome locationChr5:9458567..9459381
RNA-Seq ExpressionCSPI05G10910
SyntenyCSPI05G10910
Gene Ontology termsGO:0000038 - very long-chain fatty acid metabolic process (biological process)
GO:0001676 - long-chain fatty acid metabolic process (biological process)
GO:0010032 - meiotic chromosome condensation (biological process)
GO:0033540 - fatty acid beta-oxidation using acyl-CoA oxidase (biological process)
GO:0051455 - attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation (biological process)
GO:0051754 - meiotic sister chromatid cohesion, centromeric (biological process)
GO:0055088 - lipid homeostasis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005777 - peroxisome (cellular component)
GO:0008278 - cohesin complex (cellular component)
GO:0005504 - fatty acid binding (molecular function)
GO:0016401 - palmitoyl-CoA oxidase activity (molecular function)
GO:0071949 - FAD binding (molecular function)
InterPro domainsIPR039781 - Rad21/Rec8-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035874.1 sister chromatid cohesion 1 protein 1 [Cucumis melo var. makuwa]1.3e-7995.09Show/hide
Query:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS
        PFEDHYSGVGSQSFG SMEKLMTGQVN GAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDS+RFNKKR YSSSKRS
Subjt:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS

Query:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM
        SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQ++QAA K+PPADKITDSIRM
Subjt:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM

KGN50276.2 hypothetical protein Csa_005815 [Cucumis sativus]1.1e-83100Show/hide
Query:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS
        PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS
Subjt:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS

Query:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM
        SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM
Subjt:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM

TYK30322.1 sister chromatid cohesion 1 protein 1 [Cucumis melo var. makuwa]1.3e-7995.09Show/hide
Query:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS
        PFEDHYSGVGSQSFG SMEKLMTGQVN GAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDS+RFNKKR YSSSKRS
Subjt:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS

Query:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM
        SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQ++QAA K+PPADKITDSIRM
Subjt:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM

XP_008454870.1 PREDICTED: sister chromatid cohesion 1 protein 1 [Cucumis melo]1.3e-7995.09Show/hide
Query:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS
        PFEDHYSGVGSQSFG SMEKLMTGQVN GAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDS+RFNKKR YSSSKRS
Subjt:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS

Query:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM
        SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQ++QAA K+PPADKITDSIRM
Subjt:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM

XP_031742082.1 sister chromatid cohesion 1 protein 1 [Cucumis sativus]1.1e-83100Show/hide
Query:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS
        PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS
Subjt:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS

Query:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM
        SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM
Subjt:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM

TrEMBL top hitse value%identityAlignment
A0A0A0KQK0 Uncharacterized protein2.9e-85100Show/hide
Query:  MKPFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSK
        MKPFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSK
Subjt:  MKPFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSK

Query:  RSSGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM
        RSSGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM
Subjt:  RSSGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM

A0A1S3BZ41 sister chromatid cohesion 1 protein 16.3e-8095.09Show/hide
Query:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS
        PFEDHYSGVGSQSFG SMEKLMTGQVN GAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDS+RFNKKR YSSSKRS
Subjt:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS

Query:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM
        SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQ++QAA K+PPADKITDSIRM
Subjt:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM

A0A5A7SX09 Sister chromatid cohesion 1 protein 16.3e-8095.09Show/hide
Query:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS
        PFEDHYSGVGSQSFG SMEKLMTGQVN GAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDS+RFNKKR YSSSKRS
Subjt:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS

Query:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM
        SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQ++QAA K+PPADKITDSIRM
Subjt:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM

A0A5D3E364 Sister chromatid cohesion 1 protein 16.3e-8095.09Show/hide
Query:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS
        PFEDHYSGVGSQSFG SMEKLMTGQVN GAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDS+RFNKKR YSSSKRS
Subjt:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRS

Query:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM
        SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQ++QAA K+PPADKITDSIRM
Subjt:  SGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM

A0A6J1FMB0 sister chromatid cohesion 1 protein 19.2e-5575.15Show/hide
Query:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGG--AEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSK
        PFEDH+SGVGSQSFG+S+EKL T  VN    AEI L EL PN MDNVM +AERNQ+ TPGNSG G+R VSSSASEH V S NS T+S R NKKR YSSS+
Subjt:  PFEDHYSGVGSQSFGSSMEKLMTGQVNGG--AEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSK

Query:  RSSGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM
         SSGGLEPV EEN W HHSDPNFKLARLSEND DLL ETA TQTQ+TQ AIK+ PADKITDSIRM
Subjt:  RSSGGLEPVAEENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCTTTTGAAGATCATTACAGTGGAGTTGGTTCTCAGTCGTTTGGAAGTTCCATGGAGAAGCTAATGACCGGACAAGTCAATGGTGGTGCCGAGATCCCTCTGGA
AGAACTTGGACCCAACATCATGGATAATGTTATGGAGATGGCTGAAAGAAATCAAATGGGTACACCTGGAAATTCCGGATTTGGAGTGAGGTCAGTTTCAAGCTCAGCAT
CTGAACATGATGTGCTATCAAAAAATTCAGGGACTGATTCTTTACGGTTCAACAAGAAAAGATCTTATTCTTCATCGAAACGAAGTAGCGGAGGCCTCGAACCTGTAGCT
GAGGAGAATCCATGGTCTCATCACTCTGATCCAAATTTCAAGTTAGCGAGGTTGTCTGAAAATGATCCAGATTTATTGGAAGAAACTGCACTGACCCAAACTCAACTTAC
TCAAGCTGCTATCAAGTATCCTCCTGCTGACAAGATAACTGATTCCATTCGAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCTTTTGAAGATCATTACAGTGGAGTTGGTTCTCAGTCGTTTGGAAGTTCCATGGAGAAGCTAATGACCGGACAAGTCAATGGTGGTGCCGAGATCCCTCTGGA
AGAACTTGGACCCAACATCATGGATAATGTTATGGAGATGGCTGAAAGAAATCAAATGGGTACACCTGGAAATTCCGGATTTGGAGTGAGGTCAGTTTCAAGCTCAGCAT
CTGAACATGATGTGCTATCAAAAAATTCAGGGACTGATTCTTTACGGTTCAACAAGAAAAGATCTTATTCTTCATCGAAACGAAGTAGCGGAGGCCTCGAACCTGTAGCT
GAGGAGAATCCATGGTCTCATCACTCTGATCCAAATTTCAAGTTAGCGAGGTTGTCTGAAAATGATCCAGATTTATTGGAAGAAACTGCACTGACCCAAACTCAACTTAC
TCAAGCTGCTATCAAGTATCCTCCTGCTGACAAGATAACTGATTCCATTCGAATGTAA
Protein sequenceShow/hide protein sequence
MKPFEDHYSGVGSQSFGSSMEKLMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKNSGTDSLRFNKKRSYSSSKRSSGGLEPVA
EENPWSHHSDPNFKLARLSENDPDLLEETALTQTQLTQAAIKYPPADKITDSIRM