; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G10920 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G10920
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionsister chromatid cohesion 1 protein 1
Genome locationChr5:9459633..9463162
RNA-Seq ExpressionCSPI05G10920
SyntenyCSPI05G10920
Gene Ontology termsGO:0000038 - very long-chain fatty acid metabolic process (biological process)
GO:0001676 - long-chain fatty acid metabolic process (biological process)
GO:0010032 - meiotic chromosome condensation (biological process)
GO:0033540 - fatty acid beta-oxidation using acyl-CoA oxidase (biological process)
GO:0051455 - attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation (biological process)
GO:0051754 - meiotic sister chromatid cohesion, centromeric (biological process)
GO:0055088 - lipid homeostasis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005777 - peroxisome (cellular component)
GO:0008278 - cohesin complex (cellular component)
GO:0005504 - fatty acid binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0016401 - palmitoyl-CoA oxidase activity (molecular function)
GO:0071949 - FAD binding (molecular function)
InterPro domainsIPR006910 - Rad21/Rec8-like protein, N-terminal
IPR039781 - Rad21/Rec8-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035874.1 sister chromatid cohesion 1 protein 1 [Cucumis melo var. makuwa]4.8e-14180.47Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
        MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +    LIEINEAWKVKAAPEPTALPKGKSLAKKEA+TRPEKD
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD

Query:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP
        PND+SYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTD ENITLIERFDMYQSKTSTFDRFERFDIEE  DTQPDFASVDQTQIPATVRP
Subjt:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP

Query:  PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-------------------------------------------------QRTGPMFTKKIAT
         PPPPDKYPEGPPDAEVQDQHLEH VDQPA+ESKE RQ                                                 QRTGPMFTKKI T
Subjt:  PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-------------------------------------------------QRTGPMFTKKIAT

Query:  LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS
        LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQ PDSPS
Subjt:  LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS

KGN50276.2 hypothetical protein Csa_005815 [Cucumis sativus]1.9e-13781.33Show/hide
Query:  EEILNPSVPMALRLSGILM------------GGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYDTSPM
        EEILNPSVPMALRLSGILM            GGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISY+TSPM
Subjt:  EEILNPSVPMALRLSGILM------------GGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYDTSPM

Query:  KFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRPPPPPPDKYPEG
        KFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRPPPPPPDKYPEG
Subjt:  KFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRPPPPPPDKYPEG

Query:  PPDAEVQDQHLEHIVDQPAEESKELRQ-------------------------------------------------QRTGPMFTKKIATLMDLPPVVLSE
        PPDAEVQDQHLEHIVDQPAEESKELRQ                                                 QRTGPMFTKKIATLMDLPPVVLSE
Subjt:  PPDAEVQDQHLEHIVDQPAEESKELRQ-------------------------------------------------QRTGPMFTKKIATLMDLPPVVLSE

Query:  RLFTEGSREAYYPAPLLELWMRSIRQPPDSPS
        RLFTEGSREAYYPAPLLELWMRSIRQPPDSPS
Subjt:  RLFTEGSREAYYPAPLLELWMRSIRQPPDSPS

TYK30322.1 sister chromatid cohesion 1 protein 1 [Cucumis melo var. makuwa]8.4e-14682.16Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
        MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEA+TRPEKD
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD

Query:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP
        PND+SYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTD ENITLIERFDMYQSKTSTFDRFERFDIEE  DTQPDFASVDQTQIPATVRP
Subjt:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP

Query:  PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ------------------------------------------------QRTGPMFTKKIATL
         PPPPDKYPEGPPDAEVQDQHLEH VDQPA+ESKE RQ                                                +RTGPMFTKKI TL
Subjt:  PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ------------------------------------------------QRTGPMFTKKIATL

Query:  MDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS
        MDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQ PDSPS
Subjt:  MDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS

XP_008454870.1 PREDICTED: sister chromatid cohesion 1 protein 1 [Cucumis melo]3.8e-14682.22Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
        MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEA+TRPEKD
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD

Query:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP
        PND+SYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTD ENITLIERFDMYQSKTSTFDRFERFDIEE  DTQPDFASVDQTQIPATVRP
Subjt:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP

Query:  PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-------------------------------------------------QRTGPMFTKKIAT
         PPPPDKYPEGPPDAEVQDQHLEH VDQPA+ESKE RQ                                                 QRTGPMFTKKI T
Subjt:  PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-------------------------------------------------QRTGPMFTKKIAT

Query:  LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS
        LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQ PDSPS
Subjt:  LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS

XP_031742082.1 sister chromatid cohesion 1 protein 1 [Cucumis sativus]1.9e-15385.42Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
        MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD

Query:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP
        PNDISY+TSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP
Subjt:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP

Query:  PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-------------------------------------------------QRTGPMFTKKIAT
        PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ                                                 QRTGPMFTKKIAT
Subjt:  PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-------------------------------------------------QRTGPMFTKKIAT

Query:  LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS
        LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS
Subjt:  LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS

TrEMBL top hitse value%identityAlignment
A0A1S3BZ41 sister chromatid cohesion 1 protein 11.8e-14682.22Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
        MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEA+TRPEKD
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD

Query:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP
        PND+SYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTD ENITLIERFDMYQSKTSTFDRFERFDIEE  DTQPDFASVDQTQIPATVRP
Subjt:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP

Query:  PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-------------------------------------------------QRTGPMFTKKIAT
         PPPPDKYPEGPPDAEVQDQHLEH VDQPA+ESKE RQ                                                 QRTGPMFTKKI T
Subjt:  PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-------------------------------------------------QRTGPMFTKKIAT

Query:  LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS
        LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQ PDSPS
Subjt:  LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS

A0A5A7SX09 Sister chromatid cohesion 1 protein 12.3e-14180.47Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
        MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY +    LIEINEAWKVKAAPEPTALPKGKSLAKKEA+TRPEKD
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD

Query:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP
        PND+SYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTD ENITLIERFDMYQSKTSTFDRFERFDIEE  DTQPDFASVDQTQIPATVRP
Subjt:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP

Query:  PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-------------------------------------------------QRTGPMFTKKIAT
         PPPPDKYPEGPPDAEVQDQHLEH VDQPA+ESKE RQ                                                 QRTGPMFTKKI T
Subjt:  PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-------------------------------------------------QRTGPMFTKKIAT

Query:  LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS
        LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQ PDSPS
Subjt:  LMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS

A0A5D3E364 Sister chromatid cohesion 1 protein 14.1e-14682.16Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
        MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEA+TRPEKD
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD

Query:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP
        PND+SYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTD ENITLIERFDMYQSKTSTFDRFERFDIEE  DTQPDFASVDQTQIPATVRP
Subjt:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRP

Query:  PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ------------------------------------------------QRTGPMFTKKIATL
         PPPPDKYPEGPPDAEVQDQHLEH VDQPA+ESKE RQ                                                +RTGPMFTKKI TL
Subjt:  PPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ------------------------------------------------QRTGPMFTKKIATL

Query:  MDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS
        MDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQ PDSPS
Subjt:  MDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS

A0A6J1GXZ1 sister chromatid cohesion 1 protein 1-like isoform X15.0e-12069.32Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
        MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLL+EINEAWKVKAAPEPT +PKGKS+AKKEA+TRP+KD
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD

Query:  PNDI----------SYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVD
        P D+          SY+TSPMKFQQTAFF+MRLDSVDEPYI++KTVEDD S NFHQTDAENITL+ERFDMYQS T+ F+RFERFDIE+D DTQP+FASVD
Subjt:  PNDI----------SYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVD

Query:  QTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQQ------------------------------------------------RTG
        QT+IP T     PP DKY EGPPDAEVQDQHLE  V Q A  SKE RQ+                                                RTG
Subjt:  QTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQQ------------------------------------------------RTG

Query:  PMFTKKIATLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS
         M + KIATLMDLPPVVL  RLFT+GSRE YYPAPLLELWM+SIR PPDSPS
Subjt:  PMFTKKIATLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS

A0A6J1JET8 sister chromatid cohesion 1 protein 1-like isoform X11.7e-12069.89Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
        MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLL+EINEAWKVKAAPE T +PKGKS+AKKEA TRP+KD
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD

Query:  PNDI----------SYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVD
        P D+          SYDTSPMKFQQTAFF+MRLDSVDEPYI++KTVEDD S NFHQTDAENITL+ERFDMYQS T+TF+RFERFDIE+D DTQ +FASVD
Subjt:  PNDI----------SYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVD

Query:  QTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ------------------------------------------------QRTG
        QT+IP T   P PP DKY EG P+AEVQDQHLE  V Q A ESKELRQ                                                +RTG
Subjt:  QTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ------------------------------------------------QRTG

Query:  PMFTKKIATLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS
         M + KIATLMDLPPVVLS RLFT+GSRE YYPAPLLELWM+SIR PPDSPS
Subjt:  PMFTKKIATLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPS

SwissProt top hitse value%identityAlignment
O60216 Double-strand-break repair protein rad21 homolog2.3e-0536.36Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEK
        +AA    K+ +  +   N+    E I++P V MALR SG L+ GVV +Y RK K L  D     I+I  A++    P    LP+    A   AIT PE+
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEK

Q3SWX9 Double-strand-break repair protein rad21 homolog2.3e-0536.36Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEK
        +AA    K+ +  +   N+    E I++P V MALR SG L+ GVV +Y RK K L  D     I+I  A++    P    LP+    A   AIT PE+
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEK

Q6TEL1 Double-strand-break repair protein rad21 homolog A1.8e-0536.36Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEK
        +AA    K+ +  +   N+    E I++P V MALR SG L+ GVV +Y RK K L  D     I+I  A++    P    LP+    A   AIT PE+
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEK

Q8W1Y0 Sister chromatid cohesion 1 protein 41.9e-0728.8Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
        +AA +  K+ + ++ + +I    + IL P  P+ALRLS  L+ GVV +Y RKV  L++D +  L+++ +A++  A      LP  +S A   +IT PE  
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD

Query:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQ
                           +  LD  + P   D  +      + H +  E ITL +  D     TS F   ERF    DGDT      +D+
Subjt:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQ

Q9S7T7 Sister chromatid cohesion 1 protein 15.8e-5750.76Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
        MAAT+HAKINR+KLD L+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L++DV R L+EIN AW+ K+ P+PT LPKGK+ A+KEA+T PE +
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD

Query:  PND---------ISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQ
          D         +    + M FQQT F SMRL   DE ++N+    +D  Q FHQ DAENITL E    +Q+   T+DRFERFDIE D +TQ +    + 
Subjt:  PND---------ISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQ

Query:  TQIPATVRPPPPPPDKYPEG-----PPDAEVQDQHLEHIVDQPAEESKELRQQRTGPMFTKKIA
         +IP T+ P PP     PEG     P   E Q+   +   +Q  E++   +++   P   KK A
Subjt:  TQIPATVRPPPPPPDKYPEG-----PPDAEVQDQHLEHIVDQPAEESKELRQQRTGPMFTKKIA

Arabidopsis top hitse value%identityAlignment
AT3G59550.1 Rad21/Rec8-like family protein3.6e-0626.8Show/hide
Query:  AATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKA-APEPTALPKGKSLAKKEAITRPEK-
        AA +H ++ + +  ++NI    + I+ P VP+ALR S  L+ GVV +Y +KV  LY D   L       W  KA       LP+    A  E++T P+  
Subjt:  AATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKA-APEPTALPKGKSLAKKEAITRPEK-

Query:  --DPNDISYDTSPMKF------QQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPD
          D  D+  DT  M+F      ++    + ++ +  +PY+     ED  S++               D+ QS           D+E   +T PD
Subjt:  --DPNDISYDTSPMKF------QQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPD

AT5G05490.1 Rad21/Rec8-like family protein4.1e-5850.76Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
        MAAT+HAKINR+KLD L+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L++DV R L+EIN AW+ K+ P+PT LPKGK+ A+KEA+T PE +
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD

Query:  PND---------ISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQ
          D         +    + M FQQT F SMRL   DE ++N+    +D  Q FHQ DAENITL E    +Q+   T+DRFERFDIE D +TQ +    + 
Subjt:  PND---------ISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQ

Query:  TQIPATVRPPPPPPDKYPEG-----PPDAEVQDQHLEHIVDQPAEESKELRQQRTGPMFTKKIA
         +IP T+ P PP     PEG     P   E Q+   +   +Q  E++   +++   P   KK A
Subjt:  TQIPATVRPPPPPPDKYPEG-----PPDAEVQDQHLEHIVDQPAEESKELRQQRTGPMFTKKIA

AT5G05490.2 Rad21/Rec8-like family protein4.1e-5850.76Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
        MAAT+HAKINR+KLD L+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L++DV R L+EIN AW+ K+ P+PT LPKGK+ A+KEA+T PE +
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD

Query:  PND---------ISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQ
          D         +    + M FQQT F SMRL   DE ++N+    +D  Q FHQ DAENITL E    +Q+   T+DRFERFDIE D +TQ +    + 
Subjt:  PND---------ISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQ

Query:  TQIPATVRPPPPPPDKYPEG-----PPDAEVQDQHLEHIVDQPAEESKELRQQRTGPMFTKKIA
         +IP T+ P PP     PEG     P   E Q+   +   +Q  E++   +++   P   KK A
Subjt:  TQIPATVRPPPPPPDKYPEG-----PPDAEVQDQHLEHIVDQPAEESKELRQQRTGPMFTKKIA

AT5G16270.1 sister chromatid cohesion 1 protein 41.3e-0828.8Show/hide
Query:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD
        +AA +  K+ + ++ + +I    + IL P  P+ALRLS  L+ GVV +Y RKV  L++D +  L+++ +A++  A      LP  +S A   +IT PE  
Subjt:  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKD

Query:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQ
                           +  LD  + P   D  +      + H +  E ITL +  D     TS F   ERF    DGDT      +D+
Subjt:  PNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGACAATGCACGCCAAGATTAATCGGAGGAAGCTCGATAACTTGAACATAATCAAAATTTGTGAGGAGATTTTGAATCCTTCGGTTCCGATGGCTCTAAGACT
CTCGGGGATTCTTATGGGTGGCGTTGTCATTGTTTATGAACGGAAAGTTAAAATTCTTTACGAGGATGTAACTCGCCTTCTGATTGAGATAAACGAAGCATGGAAAGTGA
AAGCAGCTCCAGAGCCCACCGCCCTTCCCAAAGGAAAATCTCTGGCCAAGAAGGAGGCTATTACTAGGCCTGAGAAGGATCCGAACGACATTTCCTACGACACTTCTCCA
ATGAAGTTTCAACAAACCGCATTTTTTAGTATGCGGCTTGACAGTGTGGATGAACCCTATATCAACGATAAAACAGTGGAAGATGACCCATCACAAAACTTCCATCAAAC
TGATGCTGAAAATATAACCTTAATTGAGCGTTTTGATATGTATCAATCAAAGACAAGTACATTTGATCGGTTTGAAAGATTTGATATTGAAGAGGACGGGGATACACAAC
CAGATTTTGCATCTGTAGATCAAACACAAATTCCAGCTACTGTTAGACCTCCCCCTCCTCCTCCAGACAAGTATCCAGAAGGCCCTCCTGATGCTGAAGTCCAGGACCAA
CATCTTGAACACATTGTTGATCAGCCGGCCGAGGAATCCAAGGAACTTAGACAGCAACGGACAGGTCCAATGTTCACTAAGAAGATAGCCACTCTCATGGACCTTCCTCC
TGTGGTGTTAAGTGAACGCTTATTCACAGAGGGAAGTAGGGAAGCCTACTATCCAGCTCCTCTCCTAGAGTTATGGATGAGAAGTATCCGCCAACCCCCTGACTCACCTT
CTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCGACAATGCACGCCAAGATTAATCGGAGGAAGCTCGATAACTTGAACATAATCAAAATTTGTGAGGAGATTTTGAATCCTTCGGTTCCGATGGCTCTAAGACT
CTCGGGGATTCTTATGGGTGGCGTTGTCATTGTTTATGAACGGAAAGTTAAAATTCTTTACGAGGATGTAACTCGCCTTCTGATTGAGATAAACGAAGCATGGAAAGTGA
AAGCAGCTCCAGAGCCCACCGCCCTTCCCAAAGGAAAATCTCTGGCCAAGAAGGAGGCTATTACTAGGCCTGAGAAGGATCCGAACGACATTTCCTACGACACTTCTCCA
ATGAAGTTTCAACAAACCGCATTTTTTAGTATGCGGCTTGACAGTGTGGATGAACCCTATATCAACGATAAAACAGTGGAAGATGACCCATCACAAAACTTCCATCAAAC
TGATGCTGAAAATATAACCTTAATTGAGCGTTTTGATATGTATCAATCAAAGACAAGTACATTTGATCGGTTTGAAAGATTTGATATTGAAGAGGACGGGGATACACAAC
CAGATTTTGCATCTGTAGATCAAACACAAATTCCAGCTACTGTTAGACCTCCCCCTCCTCCTCCAGACAAGTATCCAGAAGGCCCTCCTGATGCTGAAGTCCAGGACCAA
CATCTTGAACACATTGTTGATCAGCCGGCCGAGGAATCCAAGGAACTTAGACAGCAACGGACAGGTCCAATGTTCACTAAGAAGATAGCCACTCTCATGGACCTTCCTCC
TGTGGTGTTAAGTGAACGCTTATTCACAGAGGGAAGTAGGGAAGCCTACTATCCAGCTCCTCTCCTAGAGTTATGGATGAGAAGTATCCGCCAACCCCCTGACTCACCTT
CTGGTTAG
Protein sequenceShow/hide protein sequence
MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYDTSP
MKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRPPPPPPDKYPEGPPDAEVQDQ
HLEHIVDQPAEESKELRQQRTGPMFTKKIATLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPSG