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CSPI05G11160 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G11160
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationChr5:9797568..9797960
RNA-Seq ExpressionCSPI05G11160
SyntenyCSPI05G11160
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648040.1 hypothetical protein Csa_005836 [Cucumis sativus]1.3e-4496.7Show/hide
Query:  MNVIVIRKILKKYRFKDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLEFDLYALDWWTSLLKIMCLFSCFSDDLRWTKGY
        MNVIVIRKILKKY FKDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLEFDLYALDWWTSL+KIMCLF+CFSDDLRWTKGY
Subjt:  MNVIVIRKILKKYRFKDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLEFDLYALDWWTSLLKIMCLFSCFSDDLRWTKGY
XP_004136542.2 probable E3 ubiquitin-protein ligase BAH1-like isoform X1 [Cucumis sativus]1.4e-1486.54Show/hide
Query:  KDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE--FDLYAL
        KDG+YPS FSTHFSFNVDAAPTMTLML +SIKLEYDLTCPICLE  FD YAL
Subjt:  KDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE--FDLYAL
XP_008442983.1 PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X1 [Cucumis melo]4.4e-1351.4Show/hide
Query:  MNVIVIRKILKKY-------------------------------------RFK---DGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE-
        MN I IRKILKKY                                      FK   DG+YPS FSTHF FNVD APTMTLML +SIKLEYDLTCPICLE 
Subjt:  MNVIVIRKILKKY-------------------------------------RFK---DGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE-

Query:  -FDLYAL
         FD YAL
Subjt:  -FDLYAL
XP_008442986.1 PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis melo]4.4e-1351.4Show/hide
Query:  MNVIVIRKILKKY-------------------------------------RFK---DGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE-
        MN I IRKILKKY                                      FK   DG+YPS FSTHF FNVD APTMTLML +SIKLEYDLTCPICLE 
Subjt:  MNVIVIRKILKKY-------------------------------------RFK---DGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE-

Query:  -FDLYAL
         FD YAL
Subjt:  -FDLYAL
XP_031739330.1 probable E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis sativus]1.4e-1486.54Show/hide
Query:  KDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE--FDLYAL
        KDG+YPS FSTHFSFNVDAAPTMTLML +SIKLEYDLTCPICLE  FD YAL
Subjt:  KDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE--FDLYAL
TrEMBL top hitse value%identityAlignment
A0A0A0LBP6 RING-type E3 ubiquitin transferase6.6e-1586.54Show/hide
Query:  KDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE--FDLYAL
        KDG+YPS FSTHFSFNVDAAPTMTLML +SIKLEYDLTCPICLE  FD YAL
Subjt:  KDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE--FDLYAL
A0A1S3B703 RING-type E3 ubiquitin transferase2.1e-1351.4Show/hide
Query:  MNVIVIRKILKKY-------------------------------------RFK---DGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE-
        MN I IRKILKKY                                      FK   DG+YPS FSTHF FNVD APTMTLML +SIKLEYDLTCPICLE 
Subjt:  MNVIVIRKILKKY-------------------------------------RFK---DGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE-

Query:  -FDLYAL
         FD YAL
Subjt:  -FDLYAL
A0A1S3B726 RING-type E3 ubiquitin transferase2.1e-1351.4Show/hide
Query:  MNVIVIRKILKKY-------------------------------------RFK---DGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE-
        MN I IRKILKKY                                      FK   DG+YPS FSTHF FNVD APTMTLML +SIKLEYDLTCPICLE 
Subjt:  MNVIVIRKILKKY-------------------------------------RFK---DGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE-

Query:  -FDLYAL
         FD YAL
Subjt:  -FDLYAL
A0A5D3DPA7 RING-type E3 ubiquitin transferase2.1e-1351.4Show/hide
Query:  MNVIVIRKILKKY-------------------------------------RFK---DGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE-
        MN I IRKILKKY                                      FK   DG+YPS FSTHF FNVD APTMTLML +SIKLEYDLTCPICLE 
Subjt:  MNVIVIRKILKKY-------------------------------------RFK---DGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE-

Query:  -FDLYAL
         FD YAL
Subjt:  -FDLYAL
A0A6J1DDH0 RING-type E3 ubiquitin transferase9.9e-1174Show/hide
Query:  GNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE--FDLYAL
        GN+P+E STHFS +VD  PTMTLML +SIK+EYDLTCPICLE  FD YAL
Subjt:  GNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLE--FDLYAL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38920.1 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related8.0e-0550.98Show/hide
Query:  GNYPSEFSTHFSFNV-DAAPTMTLMLLNSIKLEYDLTCPICLE--FDLYAL
        GN+ + F      N+ +  P + LML NSI+LEYDLTC ICLE  F+ YAL
Subjt:  GNYPSEFSTHFSFNV-DAAPTMTLMLLNSIKLEYDLTCPICLE--FDLYAL
AT2G38920.2 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related8.0e-0550.98Show/hide
Query:  GNYPSEFSTHFSFNV-DAAPTMTLMLLNSIKLEYDLTCPICLE--FDLYAL
        GN+ + F      N+ +  P + LML NSI+LEYDLTC ICLE  F+ YAL
Subjt:  GNYPSEFSTHFSFNV-DAAPTMTLMLLNSIKLEYDLTCPICLE--FDLYAL
AT2G38920.3 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related8.0e-0550.98Show/hide
Query:  GNYPSEFSTHFSFNV-DAAPTMTLMLLNSIKLEYDLTCPICLE--FDLYAL
        GN+ + F      N+ +  P + LML NSI+LEYDLTC ICLE  F+ YAL
Subjt:  GNYPSEFSTHFSFNV-DAAPTMTLMLLNSIKLEYDLTCPICLE--FDLYAL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTTATTGTTATTAGAAAGATTCTCAAAAAATATAGATTCAAGGATGGAAACTATCCTTCAGAATTCTCCACTCACTTTTCCTTCAATGTCGATGCGGCACCGAC
AATGACATTGATGCTTCTGAATTCTATAAAGTTGGAATATGATCTTACTTGCCCTATATGCTTGGAATTTGATCTATATGCTTTGGATTGGTGGACATCTCTTCTGAAAA
TCATGTGTTTGTTTAGCTGCTTCAGTGATGATTTGCGTTGGACCAAAGGCTAC
mRNA sequenceShow/hide mRNA sequence
ATGAATGTTATTGTTATTAGAAAGATTCTCAAAAAATATAGATTCAAGGATGGAAACTATCCTTCAGAATTCTCCACTCACTTTTCCTTCAATGTCGATGCGGCACCGAC
AATGACATTGATGCTTCTGAATTCTATAAAGTTGGAATATGATCTTACTTGCCCTATATGCTTGGAATTTGATCTATATGCTTTGGATTGGTGGACATCTCTTCTGAAAA
TCATGTGTTTGTTTAGCTGCTTCAGTGATGATTTGCGTTGGACCAAAGGCTAC
Protein sequenceShow/hide protein sequence
MNVIVIRKILKKYRFKDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLEFDLYALDWWTSLLKIMCLFSCFSDDLRWTKGY