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CSPI05G11300 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G11300
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionARM repeat superfamily protein
Genome locationChr5:9894263..9897763
RNA-Seq ExpressionCSPI05G11300
SyntenyCSPI05G11300
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146451.1 uncharacterized protein LOC101212969 isoform X1 [Cucumis sativus]1.5e-9598.95Show/hide
Query:  MRIIASKLTT--HLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSID
        MRIIASKLTT  HLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSID
Subjt:  MRIIASKLTT--HLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSID

Query:  DEKRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        DEKRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
Subjt:  DEKRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

XP_008456907.1 PREDICTED: uncharacterized protein LOC103496719 isoform X2 [Cucumis melo]1.3e-9194.68Show/hide
Query:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE
        MRIIASKLT HLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSV+LLRVKDPLFKRMGASRLARFSIDD+
Subjt:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE

Query:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        +RMKIVE GGAQELLNML  AKDDRTRKEALKAL+AISHSDEA G LHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
Subjt:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

XP_011655026.1 uncharacterized protein LOC101212969 isoform X2 [Cucumis sativus]4.6e-97100Show/hide
Query:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE
        MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE
Subjt:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE

Query:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
Subjt:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

XP_023526983.1 uncharacterized protein LOC111790336 isoform X2 [Cucurbita pepo subsp. pepo]3.4e-9295.21Show/hide
Query:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE
        MRII SKLT HLCRREP RTLQFR FSAYDEREIEKEAERKVGWLLKLIFAGTATFLGY IFPYMGDNLLQQSVSLL+VKDPLFKRMGASRLARFSIDDE
Subjt:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE

Query:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEA GALHKAGAILVIKSTPDSAEDM+VNEYKSNLMKRFRDL YDVSS
Subjt:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

XP_038891777.1 uncharacterized protein LOC120081166 isoform X1 [Benincasa hispida]7.3e-9597.34Show/hide
Query:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE
        MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATF+GYQIFPYMGDNLLQQSVSLL+VKDPLFKRMGASRLARFSIDDE
Subjt:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE

Query:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        +RMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEA GALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDL YDVSS
Subjt:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

TrEMBL top hitse value%identityAlignment
A0A0A0KM85 Uncharacterized protein2.2e-97100Show/hide
Query:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE
        MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE
Subjt:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE

Query:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
Subjt:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

A0A1S3C497 uncharacterized protein LOC103496719 isoform X26.2e-9294.68Show/hide
Query:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE
        MRIIASKLT HLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSV+LLRVKDPLFKRMGASRLARFSIDD+
Subjt:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE

Query:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        +RMKIVE GGAQELLNML  AKDDRTRKEALKAL+AISHSDEA G LHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
Subjt:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

A0A1S3C4C9 uncharacterized protein LOC103496719 isoform X12.0e-9093.68Show/hide
Query:  MRIIASKLTT--HLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSID
        MRIIASKLT   HLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSV+LLRVKDPLFKRMGASRLARFSID
Subjt:  MRIIASKLTT--HLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSID

Query:  DEKRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        D++RMKIVE GGAQELLNML  AKDDRTRKEALKAL+AISHSDEA G LHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
Subjt:  DEKRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

A0A6J1FTA5 uncharacterized protein LOC111447100 isoform X28.1e-9294.68Show/hide
Query:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE
        MRII SKLT HLCRREP RTLQFR FSAYDEREIEKEAERKVGWLLKLIFAGTATFLGY IFPYMGDNLLQQSVSLL+VKDPLFKRMGASRLARFSIDDE
Subjt:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE

Query:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEA GALHKAGAILVIKSTPDSAED +VNEYKSNLMKRFRDL YDVSS
Subjt:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

A0A6J1K968 uncharacterized protein LOC111491787 isoform X24.0e-9194.15Show/hide
Query:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE
        MRII SKLT HLCRREP RTLQFR FSAYDEREIEKEAERKVGWLLKLIFAGTATFLGY IFPYMGDNLLQQSVSLL+VKDPLFKRMGASRLARFSIDDE
Subjt:  MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDE

Query:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAIS+SDEA GALHKAGAILVIKSTPDSAED +VNEYKSNLMKRFRDL YDVSS
Subjt:  KRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G56210.1 ARM repeat superfamily protein4.0e-5958.42Show/hide
Query:  MRIIASKLTTHLCRREPV--RTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSID
        MRI+ +++  H CR      R+  F + +  D+  +E+EAERK+GW LK+ FAGTAT++GYQ FPY+GDNL+ QS+SLL VKDPLFKRMGASRL+RF+ID
Subjt:  MRIIASKLTTHLCRREPV--RTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSID

Query:  DEKRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        DE+RMK+VE+GGAQELL+MLG+AKDD+TRKEALKAL A+S S EAA  L   GA+ ++KSTP+S ED  ++ YKSN++++  +    VSS
Subjt:  DEKRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

AT3G56210.2 ARM repeat superfamily protein4.0e-5958.42Show/hide
Query:  MRIIASKLTTHLCRREPV--RTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSID
        MRI+ +++  H CR      R+  F + +  D+  +E+EAERK+GW LK+ FAGTAT++GYQ FPY+GDNL+ QS+SLL VKDPLFKRMGASRL+RF+ID
Subjt:  MRIIASKLTTHLCRREPV--RTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSID

Query:  DEKRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        DE+RMK+VE+GGAQELL+MLG+AKDD+TRKEALKAL A+S S EAA  L   GA+ ++KSTP+S ED  ++ YKSN++++  +    VSS
Subjt:  DEKRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

AT3G56210.4 ARM repeat superfamily protein4.0e-5958.42Show/hide
Query:  MRIIASKLTTHLCRREPV--RTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSID
        MRI+ +++  H CR      R+  F + +  D+  +E+EAERK+GW LK+ FAGTAT++GYQ FPY+GDNL+ QS+SLL VKDPLFKRMGASRL+RF+ID
Subjt:  MRIIASKLTTHLCRREPV--RTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSID

Query:  DEKRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        DE+RMK+VE+GGAQELL+MLG+AKDD+TRKEALKAL A+S S EAA  L   GA+ ++KSTP+S ED  ++ YKSN++++  +    VSS
Subjt:  DEKRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

AT3G56210.5 ARM repeat superfamily protein1.3e-5757.81Show/hide
Query:  MRIIASKLTTHLCRREPV--RTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSID
        MRI+ +++  H CR      R+  F + +  D+  +E+EAERK+GW LK+ FAGTAT++GYQ FPY+GDNL+ QS+SLL VKDPLFKRMGASRL+RF+ID
Subjt:  MRIIASKLTTHLCRREPV--RTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSID

Query:  DEKRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHS--DEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        DE+RMK+VE+GGAQELL+MLG+AKDD+TRKEALKAL A+S S   EAA  L   GA+ ++KSTP+S ED  ++ YKSN++++  +    VSS
Subjt:  DEKRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHS--DEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCATAATCGCATCAAAGCTAACCACTCATCTGTGCAGAAGGGAACCTGTGCGAACCCTGCAATTTCGCACTTTTTCAGCTTACGACGAAAGAGAGATTGAGAAGGA
GGCTGAAAGAAAAGTAGGATGGTTGTTAAAACTTATCTTTGCCGGGACTGCGACATTTCTGGGTTACCAGATTTTTCCATACATGGGGGATAACTTGTTGCAGCAATCTG
TGTCGCTCTTGCGAGTCAAGGATCCATTGTTCAAGAGGATGGGAGCGTCTAGATTGGCTCGCTTTTCAATTGATGATGAAAAAAGGATGAAAATAGTGGAGATTGGTGGC
GCTCAAGAGCTGTTAAACATGCTTGGGGCTGCTAAAGATGACCGGACACGTAAGGAAGCTTTGAAGGCTTTACATGCCATCTCACATTCAGATGAAGCTGCTGGTGCTTT
GCATAAAGCAGGGGCAATATTGGTTATTAAATCTACTCCAGATTCGGCTGAAGATATGAAAGTAAATGAGTACAAGTCAAACCTAATGAAGAGATTTAGAGATCTTAGAT
ATGATGTTTCATCT
mRNA sequenceShow/hide mRNA sequence
ATGCGCATAATCGCATCAAAGCTAACCACTCATCTGTGCAGAAGGGAACCTGTGCGAACCCTGCAATTTCGCACTTTTTCAGCTTACGACGAAAGAGAGATTGAGAAGGA
GGCTGAAAGAAAAGTAGGATGGTTGTTAAAACTTATCTTTGCCGGGACTGCGACATTTCTGGGTTACCAGATTTTTCCATACATGGGGGATAACTTGTTGCAGCAATCTG
TGTCGCTCTTGCGAGTCAAGGATCCATTGTTCAAGAGGATGGGAGCGTCTAGATTGGCTCGCTTTTCAATTGATGATGAAAAAAGGATGAAAATAGTGGAGATTGGTGGC
GCTCAAGAGCTGTTAAACATGCTTGGGGCTGCTAAAGATGACCGGACACGTAAGGAAGCTTTGAAGGCTTTACATGCCATCTCACATTCAGATGAAGCTGCTGGTGCTTT
GCATAAAGCAGGGGCAATATTGGTTATTAAATCTACTCCAGATTCGGCTGAAGATATGAAAGTAAATGAGTACAAGTCAAACCTAATGAAGAGATTTAGAGATCTTAGAT
ATGATGTTTCATCT
Protein sequenceShow/hide protein sequence
MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDEKRMKIVEIGG
AQELLNMLGAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS