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CSPI05G11360 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G11360
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description54S ribosomal protein L37, mitochondrial-like
Genome locationChr5:9936466..9936856
RNA-Seq ExpressionCSPI05G11360
SyntenyCSPI05G11360
Gene Ontology termsGO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649745.1 hypothetical protein Csa_012025 [Cucumis sativus]8.2e-2184.29Show/hide
Query:  NLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEG
        N++QI LFRR+IIV+SK+LIQLTSVRTFAAGGKSKKGSKGGAA DAPKASILS+ V+STTVVGANIL EG
Subjt:  NLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEG
XP_004144674.3 39S ribosomal protein L54, mitochondrial [Cucumis sativus]3.1e-2084.06Show/hide
Query:  LNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEG
        ++QI LFRR+IIV+SK+LIQLTSVRTFAAGGKSKKGSKGGAA DAPKASILS+ V+STTVVGANIL EG
Subjt:  LNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEG
XP_008442187.1 PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo]3.1e-2081.69Show/hide
Query:  LNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEG
        + L+QI  FRR+IIV+SKDLIQLTSVR+FAAGGKSKKGSKGGAA DAPKASILS+ V+STTVVGANIL EG
Subjt:  LNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEG
XP_016899597.1 PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo]3.1e-2081.69Show/hide
Query:  LNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEG
        + L+QI  FRR+IIV+SKDLIQLTSVR+FAAGGKSKKGSKGGAA DAPKASILS+ V+STTVVGANIL EG
Subjt:  LNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEG
XP_016902030.1 PREDICTED: uncharacterized protein LOC103496726 [Cucumis melo]3.1e-2084.29Show/hide
Query:  LNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNE
        + LNQISLFRRSIIVNSK+LIQLTSVRTFAAGGKSKKGSKGGAA +APKASILS+ V STTV+GA IL E
Subjt:  LNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNE
TrEMBL top hitse value%identityAlignment
A0A0A0KP92 Uncharacterized protein2.3e-2185.14Show/hide
Query:  MGLNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEGV
        MGLNLNQISLFRRSIIVNSKDLIQLTSVRTF AGGKSKKGSKGGAAVDAPKASIL         +GANILNEGV
Subjt:  MGLNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEGV
A0A1S3B544 54S ribosomal protein L37, mitochondrial isoform X21.5e-2081.69Show/hide
Query:  LNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEG
        + L+QI  FRR+IIV+SKDLIQLTSVR+FAAGGKSKKGSKGGAA DAPKASILS+ V+STTVVGANIL EG
Subjt:  LNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEG
A0A1S4E228 uncharacterized protein LOC1034967261.5e-2084.29Show/hide
Query:  LNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNE
        + LNQISLFRRSIIVNSK+LIQLTSVRTFAAGGKSKKGSKGGAA +APKASILS+ V STTV+GA IL E
Subjt:  LNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNE
A0A5D3CXE8 39S ribosomal protein L541.5e-2081.69Show/hide
Query:  LNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEG
        + L+QI  FRR+IIV+SKDLIQLTSVR+FAAGGKSKKGSKGGAA DAPKASILS+ V+STTVVGANIL EG
Subjt:  LNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEG
A0A5D3DQ60 54S ribosomal protein L371.5e-2084.29Show/hide
Query:  LNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNE
        + LNQISLFRRSIIVNSK+LIQLTSVRTFAAGGKSKKGSKGGAA +APKASILS+ V STTV+GA IL E
Subjt:  LNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01740.1 Mitochondrial ribosomal protein L371.5e-0952.86Show/hide
Query:  LNQISLFRRSIIVNSKDLIQLTSVRTF-AAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEG
        +N+I L R S   +SKD+++    RTF AA  K+KKG KGG A DAPK S L++ ++STTVVGAN L +G
Subjt:  LNQISLFRRSIIVNSKDLIQLTSVRTF-AAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEG
AT5G14290.1 Mitochondrial ribosomal protein L377.2e-0746.48Show/hide
Query:  LNQISLFRRSIIVNSKDLIQLTSVRTFA-AGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEGV
        +N I +F  S I  SKD+++    RTFA A GK+KK  +G    DAPKAS LS+ ++S+ VV AN L +G+
Subjt:  LNQISLFRRSIIVNSKDLIQLTSVRTFA-AGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEGV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGAACTTGAACCAAATTAGTTTGTTTAGAAGAAGCATTATTGTCAATAGCAAAGACCTAATACAGTTGACATCTGTCCGAACATTCGCTGCTGGAGGCAAATC
AAAGAAGGGATCTAAAGGGGGTGCAGCTGTCGATGCTCCTAAAGCATCGATACTAAGTAGAGGGGTGAGGTCTACTACAGTAGTTGGTGCCAATATTCTCAACGAAGGTG
TCTACATCCAAAAGTTATGGCAGACTCGGAGTATTCTATTTGGCTGTGGCATTTGCTTGATAAACATCTACCTCTAA
mRNA sequenceShow/hide mRNA sequence
AGTTGATTCAAAGAAAGACTGACTACCATAGCTGTTGAATTAATTCATCAGAACTAATGAATTTGTTCGTTTCTGTGTTGCAGAGAAGAAAAATATGGGTTTGAACTTGA
ACCAAATTAGTTTGTTTAGAAGAAGCATTATTGTCAATAGCAAAGACCTAATACAGTTGACATCTGTCCGAACATTCGCTGCTGGAGGCAAATCAAAGAAGGGATCTAAA
GGGGGTGCAGCTGTCGATGCTCCTAAAGCATCGATACTAAGTAGAGGGGTGAGGTCTACTACAGTAGTTGGTGCCAATATTCTCAACGAAGGTGTCTACATCCAAAAGTT
ATGGCAGACTCGGAGTATTCTATTTGGCTGTGGCATTTGCTTGATAAACATCTACCTCTAA
Protein sequenceShow/hide protein sequence
MGLNLNQISLFRRSIIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAVDAPKASILSRGVRSTTVVGANILNEGVYIQKLWQTRSILFGCGICLINIYL