| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0047995.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 1.4e-237 | 60.86 | Show/hide |
Query: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
SMGG RYF+SIID FSRKVW+YPLKQKDE F KFLEWKKQVENQTGR+VK
Subjt: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
Query: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
SPST L+LKTPQE GVKGYK+WC+EKG+NKC
Subjt: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
Query: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
IISRDV TEVR+ EVRPSI LD +Q PLVS+ E T QSEFDGIQSQQERILIDE EESSSNNDLQNYQLTR
Subjt: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
Query: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKSAKGYTQKEGVDF
DRVQRER APIRYGYADLVAYALTCAADSIEA+PLTFEE IV DSKKQWKDAME ELFSL KNQTWSLVPKP NQKLIQSKWIYKIK G K
Subjt: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKSAKGYTQKEGVDF
Query: NEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDAC
RLIL I VHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKS+YGLKQSPRQWYI FDTFILKQGF+RNSYDAC
Subjt: NEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDAC
Query: VYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD-----------------------------------------------LASHLKL
VYWK SQ+GT+IYLLLYVDDMILVSKDYA IC+LKKQLS+E+EMKD LASH +L
Subjt: VYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD-----------------------------------------------LASHLKL
Query: SSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMS--------------------------SASVSLCFIKDCDKSTLLEGFTNADNNVADL
SSSQCPVT+QER+EMSNIPYCNAVGS MYLMICTRPDLGYAMS SASVSLC+ +DCDKSTLLEGFT+AD ADL
Subjt: SSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMS--------------------------SASVSLCFIKDCDKSTLLEGFTNADNNVADL
Query: AKRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHERGK
KRRSLSGH FRLYGN+VSWKV LQPVVALSTTESEYISLGEA KEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKN SHHER K
Subjt: AKRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHERGK
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| KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.9e-253 | 62.72 | Show/hide |
Query: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
SMGG RYF+SIID FSRKVW+YPLKQKDE F KFLEWKKQVENQTGR+VK
Subjt: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
Query: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
SPST L+LKTPQE GVKGYK+WC+EKG+NKC
Subjt: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
Query: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
IISRDV TEVR+ EVRPSI LD +Q PLVS+ E T QSEFDGIQSQQERILIDEG EESSSNNDLQNYQLTR
Subjt: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
Query: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKS------------
DRVQRER APIRYGYADLVAYALTCAADSIEA+PLTFEE IV DSKKQWKDAME ELFSL KNQTWSLVPKP NQKLIQSKWIYKIK
Subjt: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKS------------
Query: ---AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDT
AKGYTQKEGVDF+EIFSPVVRHSSIRLIL I VHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKS+YGLKQSPRQWYIRFDT
Subjt: ---AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDT
Query: FILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD---------------------------------------
FILKQGF+RNSYDACVYWK SQ+GT+IYLLLYVDDMILVSKDYAEIC+LKKQLS+E+EMKD
Subjt: FILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD---------------------------------------
Query: --------LASHLKLSSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMS--------------------------SASVSLCFIKDCDKST
LASH +LSSSQCPVT+QER+EMSNIPYCNAVGS MYLMICTRPDLGYAMS SASVSLC+ +DCDKST
Subjt: --------LASHLKLSSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMS--------------------------SASVSLCFIKDCDKST
Query: LLEGFTNADNNVADLAKRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHER
LLEGFT+AD ADL KRRSLSGH FRLYGN+VSWKV LQPVVALSTTESEYISLGEA KEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKN SHHER
Subjt: LLEGFTNADNNVADLAKRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHER
Query: GK
K
Subjt: GK
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| KAA0067243.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 2.2e-201 | 62.15 | Show/hide |
Query: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
SMG RYF+SIID FSRKVW+YPLKQKDE F KFLEW+KQVENQTGR+VK
Subjt: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
Query: --SPSTTLDLKTPQE---------------GVKGY---KIWCLEKGINKCIISRDVE--TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQS
SPS+ L+LKTPQ+ G Y K L K KC+ + EVR+ LEVRP + LD DQ PLVS+ E T QSEFD +QS
Subjt: --SPSTTLDLKTPQE---------------GVKGY---KIWCLEKGINKCIISRDVE--TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQS
Query: QQERILIDEGLHSEESSSNNDLQNYQLTRDRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPK
QQERILIDEG EE+ SNNDLQNYQLTRDRVQRER +ADLVAYALTCAA+SIEA+ LTFEE IV +SKKQWKDAMEAELFSL KNQTWSLVPK
Subjt: QQERILIDEGLHSEESSSNNDLQNYQLTRDRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPK
Query: PHNQKLIQSKWIYKIKS---------------AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVK
P NQKLIQSKWIYKIK AKGYTQKEGVDF+EIFSPVVRHSSIRLIL IVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVK
Subjt: PHNQKLIQSKWIYKIKS---------------AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVK
Query: GKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD----------
GKEDMV RLHKS+YGLKQSPRQWYIRFDTFILKQGF+RNSYDACVYWKLSQ+GT+IYLLLYVDDMILVSKDY EIC+LKKQLS+E+EMKD
Subjt: GKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD----------
Query: ------LASHLKLSSSQCPVTEQERLE----MSNIP-YCNAVGSTMYLMICTRPDLGYAMSSASVSLCFIKDCDKSTLLEGFTNADNNVADLAKRRSLSG
LASH +LSSSQCPVT+QER + MS I + + G + + + L Y SASVSLC+ +DCDKSTLLEGFT+A N VADL KRRSLSG
Subjt: ------LASHLKLSSSQCPVTEQERLE----MSNIP-YCNAVGSTMYLMICTRPDLGYAMSSASVSLCFIKDCDKSTLLEGFTNADNNVADLAKRRSLSG
Query: HAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHERGK
H FRLYGN+VSWKV LQP+ ALSTTESEYISLGEA SAIHLAKN SHHER K
Subjt: HAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHERGK
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| TYK13826.1 putative polyprotein [Cucumis melo var. makuwa] | 1.9e-253 | 62.72 | Show/hide |
Query: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
SMGG RYF+SIID FSRKVW+YPLKQKDE F KFLEWKKQVENQTGR+VK
Subjt: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
Query: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
SPST L+LKTPQE GVKGYK+WC+EKG+NKC
Subjt: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
Query: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
IISRDV TEVR+ EVRPSI LD +Q PLVS+ E T QSEFDGIQSQQERILIDEG EESSSNNDLQNYQLTR
Subjt: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
Query: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKS------------
DRVQRER APIRYGYADLVAYALTCAADSIEA+PLTFEE IV DSKKQWKDAME ELFSL KNQTWSLVPKP NQKLIQSKWIYKIK
Subjt: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKS------------
Query: ---AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDT
AKGYTQKEGVDF+EIFSPVVRHSSIRLIL I VHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKS+YGLKQSPRQWYIRFDT
Subjt: ---AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDT
Query: FILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD---------------------------------------
FILKQGF+RNSYDACVYWK SQ+GT+IYLLLYVDDMILVSKDYAEIC+LKKQLS+E+EMKD
Subjt: FILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD---------------------------------------
Query: --------LASHLKLSSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMS--------------------------SASVSLCFIKDCDKST
LASH +LSSSQCPVT+QER+EMSNIPYCNAVGS MYLMICTRPDLGYAMS SASVSLC+ +DCDKST
Subjt: --------LASHLKLSSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMS--------------------------SASVSLCFIKDCDKST
Query: LLEGFTNADNNVADLAKRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHER
LLEGFT+AD ADL KRRSLSGH FRLYGN+VSWKV LQPVVALSTTESEYISLGEA KEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKN SHHER
Subjt: LLEGFTNADNNVADLAKRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHER
Query: GK
K
Subjt: GK
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 7.1e-237 | 61.34 | Show/hide |
Query: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
SMGG RYF+SIID FSRKVW+YPLKQKDE F KFLEWKKQVENQTGR+VK
Subjt: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
Query: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
SPST L+LKTPQE GVKGYK+WC+EKG+NKC
Subjt: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
Query: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
IISRDV TEVR+ EVRPSI LD +Q PLVS+ E T QSEFDGIQSQQERILIDEG EESSSNNDLQNYQLTR
Subjt: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
Query: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKS------------
DRVQRER APIRYGYADLVAYALTCAADSIEA+PLTFEE IV DSKKQWKDAME ELFSL KNQTWSLVPKP NQKLIQSKWIYKIK
Subjt: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKS------------
Query: ---AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDT
AKGYTQKEGVDF+EIFSPVVRHSSIRLIL I VHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKS+YGLKQSPRQWYIRFDT
Subjt: ---AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDT
Query: FILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD---------------------------------------
FILKQGF+RNSYDACVYWK SQ+GT+IYLLLYVDDMILVSKDYAEIC+LKKQLS+E+EMKD
Subjt: FILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD---------------------------------------
Query: --------LASHLKLSSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMSSASVSLCFIKDCDKSTLLEGFTNADNNVADLAKRRSLSGHAF
LASH +LSSSQCPVT+QER+EMSNIPYCNAVGS MYLMICTRPDLGYAMSSASVSLC+ +DCDKSTLLEGFT+AD ADL KR L
Subjt: --------LASHLKLSSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMSSASVSLCFIKDCDKSTLLEGFTNADNNVADLAKRRSLSGHAF
Query: RLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHERGK
L +EYISLGEA KEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKN SHHER K
Subjt: RLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHERGK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 7.0e-238 | 60.86 | Show/hide |
Query: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
SMGG RYF+SIID FSRKVW+YPLKQKDE F KFLEWKKQVENQTGR+VK
Subjt: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
Query: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
SPST L+LKTPQE GVKGYK+WC+EKG+NKC
Subjt: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
Query: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
IISRDV TEVR+ EVRPSI LD +Q PLVS+ E T QSEFDGIQSQQERILIDE EESSSNNDLQNYQLTR
Subjt: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
Query: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKSAKGYTQKEGVDF
DRVQRER APIRYGYADLVAYALTCAADSIEA+PLTFEE IV DSKKQWKDAME ELFSL KNQTWSLVPKP NQKLIQSKWIYKIK G K
Subjt: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKSAKGYTQKEGVDF
Query: NEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDAC
RLIL I VHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKS+YGLKQSPRQWYI FDTFILKQGF+RNSYDAC
Subjt: NEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDAC
Query: VYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD-----------------------------------------------LASHLKL
VYWK SQ+GT+IYLLLYVDDMILVSKDYA IC+LKKQLS+E+EMKD LASH +L
Subjt: VYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD-----------------------------------------------LASHLKL
Query: SSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMS--------------------------SASVSLCFIKDCDKSTLLEGFTNADNNVADL
SSSQCPVT+QER+EMSNIPYCNAVGS MYLMICTRPDLGYAMS SASVSLC+ +DCDKSTLLEGFT+AD ADL
Subjt: SSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMS--------------------------SASVSLCFIKDCDKSTLLEGFTNADNNVADL
Query: AKRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHERGK
KRRSLSGH FRLYGN+VSWKV LQPVVALSTTESEYISLGEA KEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKN SHHER K
Subjt: AKRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHERGK
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| A0A5A7UB25 Putative gag-pol polyprotein | 9.0e-254 | 62.72 | Show/hide |
Query: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
SMGG RYF+SIID FSRKVW+YPLKQKDE F KFLEWKKQVENQTGR+VK
Subjt: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
Query: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
SPST L+LKTPQE GVKGYK+WC+EKG+NKC
Subjt: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
Query: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
IISRDV TEVR+ EVRPSI LD +Q PLVS+ E T QSEFDGIQSQQERILIDEG EESSSNNDLQNYQLTR
Subjt: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
Query: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKS------------
DRVQRER APIRYGYADLVAYALTCAADSIEA+PLTFEE IV DSKKQWKDAME ELFSL KNQTWSLVPKP NQKLIQSKWIYKIK
Subjt: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKS------------
Query: ---AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDT
AKGYTQKEGVDF+EIFSPVVRHSSIRLIL I VHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKS+YGLKQSPRQWYIRFDT
Subjt: ---AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDT
Query: FILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD---------------------------------------
FILKQGF+RNSYDACVYWK SQ+GT+IYLLLYVDDMILVSKDYAEIC+LKKQLS+E+EMKD
Subjt: FILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD---------------------------------------
Query: --------LASHLKLSSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMS--------------------------SASVSLCFIKDCDKST
LASH +LSSSQCPVT+QER+EMSNIPYCNAVGS MYLMICTRPDLGYAMS SASVSLC+ +DCDKST
Subjt: --------LASHLKLSSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMS--------------------------SASVSLCFIKDCDKST
Query: LLEGFTNADNNVADLAKRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHER
LLEGFT+AD ADL KRRSLSGH FRLYGN+VSWKV LQPVVALSTTESEYISLGEA KEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKN SHHER
Subjt: LLEGFTNADNNVADLAKRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHER
Query: GK
K
Subjt: GK
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| A0A5A7VGM4 Retrotransposon protein, putative, Ty1-copia sub-class | 1.0e-201 | 62.15 | Show/hide |
Query: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
SMG RYF+SIID FSRKVW+YPLKQKDE F KFLEW+KQVENQTGR+VK
Subjt: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
Query: --SPSTTLDLKTPQE---------------GVKGY---KIWCLEKGINKCIISRDVE--TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQS
SPS+ L+LKTPQ+ G Y K L K KC+ + EVR+ LEVRP + LD DQ PLVS+ E T QSEFD +QS
Subjt: --SPSTTLDLKTPQE---------------GVKGY---KIWCLEKGINKCIISRDVE--TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQS
Query: QQERILIDEGLHSEESSSNNDLQNYQLTRDRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPK
QQERILIDEG EE+ SNNDLQNYQLTRDRVQRER +ADLVAYALTCAA+SIEA+ LTFEE IV +SKKQWKDAMEAELFSL KNQTWSLVPK
Subjt: QQERILIDEGLHSEESSSNNDLQNYQLTRDRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPK
Query: PHNQKLIQSKWIYKIKS---------------AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVK
P NQKLIQSKWIYKIK AKGYTQKEGVDF+EIFSPVVRHSSIRLIL IVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVK
Subjt: PHNQKLIQSKWIYKIKS---------------AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVK
Query: GKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD----------
GKEDMV RLHKS+YGLKQSPRQWYIRFDTFILKQGF+RNSYDACVYWKLSQ+GT+IYLLLYVDDMILVSKDY EIC+LKKQLS+E+EMKD
Subjt: GKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD----------
Query: ------LASHLKLSSSQCPVTEQERLE----MSNIP-YCNAVGSTMYLMICTRPDLGYAMSSASVSLCFIKDCDKSTLLEGFTNADNNVADLAKRRSLSG
LASH +LSSSQCPVT+QER + MS I + + G + + + L Y SASVSLC+ +DCDKSTLLEGFT+A N VADL KRRSLSG
Subjt: ------LASHLKLSSSQCPVTEQERLE----MSNIP-YCNAVGSTMYLMICTRPDLGYAMSSASVSLCFIKDCDKSTLLEGFTNADNNVADLAKRRSLSG
Query: HAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHERGK
H FRLYGN+VSWKV LQP+ ALSTTESEYISLGEA SAIHLAKN SHHER K
Subjt: HAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHERGK
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| A0A5D3CTV2 Putative polyprotein | 9.0e-254 | 62.72 | Show/hide |
Query: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
SMGG RYF+SIID FSRKVW+YPLKQKDE F KFLEWKKQVENQTGR+VK
Subjt: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
Query: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
SPST L+LKTPQE GVKGYK+WC+EKG+NKC
Subjt: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
Query: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
IISRDV TEVR+ EVRPSI LD +Q PLVS+ E T QSEFDGIQSQQERILIDEG EESSSNNDLQNYQLTR
Subjt: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
Query: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKS------------
DRVQRER APIRYGYADLVAYALTCAADSIEA+PLTFEE IV DSKKQWKDAME ELFSL KNQTWSLVPKP NQKLIQSKWIYKIK
Subjt: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKS------------
Query: ---AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDT
AKGYTQKEGVDF+EIFSPVVRHSSIRLIL I VHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKS+YGLKQSPRQWYIRFDT
Subjt: ---AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDT
Query: FILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD---------------------------------------
FILKQGF+RNSYDACVYWK SQ+GT+IYLLLYVDDMILVSKDYAEIC+LKKQLS+E+EMKD
Subjt: FILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD---------------------------------------
Query: --------LASHLKLSSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMS--------------------------SASVSLCFIKDCDKST
LASH +LSSSQCPVT+QER+EMSNIPYCNAVGS MYLMICTRPDLGYAMS SASVSLC+ +DCDKST
Subjt: --------LASHLKLSSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMS--------------------------SASVSLCFIKDCDKST
Query: LLEGFTNADNNVADLAKRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHER
LLEGFT+AD ADL KRRSLSGH FRLYGN+VSWKV LQPVVALSTTESEYISLGEA KEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKN SHHER
Subjt: LLEGFTNADNNVADLAKRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHER
Query: GK
K
Subjt: GK
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| A0A5D3DNU1 Putative gag-pol polyprotein | 3.5e-237 | 61.34 | Show/hide |
Query: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
SMGG RYF+SIID FSRKVW+YPLKQKDE F KFLEWKKQVENQTGR+VK
Subjt: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK--------------------------------------------------
Query: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
SPST L+LKTPQE GVKGYK+WC+EKG+NKC
Subjt: ----------------------------SPSTTLDLKTPQE------------------------------------------GVKGYKIWCLEKGINKC
Query: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
IISRDV TEVR+ EVRPSI LD +Q PLVS+ E T QSEFDGIQSQQERILIDEG EESSSNNDLQNYQLTR
Subjt: IISRDVE-----------------------TEVRVDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQERILIDEGLHSEESSSNNDLQNYQLTR
Query: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKS------------
DRVQRER APIRYGYADLVAYALTCAADSIEA+PLTFEE IV DSKKQWKDAME ELFSL KNQTWSLVPKP NQKLIQSKWIYKIK
Subjt: DRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKS------------
Query: ---AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDT
AKGYTQKEGVDF+EIFSPVVRHSSIRLIL I VHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKS+YGLKQSPRQWYIRFDT
Subjt: ---AKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDT
Query: FILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD---------------------------------------
FILKQGF+RNSYDACVYWK SQ+GT+IYLLLYVDDMILVSKDYAEIC+LKKQLS+E+EMKD
Subjt: FILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD---------------------------------------
Query: --------LASHLKLSSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMSSASVSLCFIKDCDKSTLLEGFTNADNNVADLAKRRSLSGHAF
LASH +LSSSQCPVT+QER+EMSNIPYCNAVGS MYLMICTRPDLGYAMSSASVSLC+ +DCDKSTLLEGFT+AD ADL KR L
Subjt: --------LASHLKLSSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMSSASVSLCFIKDCDKSTLLEGFTNADNNVADLAKRRSLSGHAF
Query: RLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHERGK
L +EYISLGEA KEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKN SHHER K
Subjt: RLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHERGK
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 3.5e-53 | 28.7 | Show/hide |
Query: HQSEFDGIQSQQERILIDEGLHSEESSSNNDLQN--YQLTRDRVQRERQAP-IRYGYADLVAYALTCAADSI-EAQPLTFEETIVYDSKKQWKDAMEAEL
H +E G + E + H +E +N +N ++ R +R + P I Y D + A +I P +F+E D K W++A+ EL
Subjt: HQSEFDGIQSQQERILIDEGLHSEESSSNNDLQN--YQLTRDRVQRERQAP-IRYGYADLVAYALTCAADSI-EAQPLTFEETIVYDSKKQWKDAMEAEL
Query: FSLQKNQTWSLVPKPHNQKLIQSKWIYKIK--------------SAKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEE
+ + N TW++ +P N+ ++ S+W++ +K A+G+TQK +D+ E F+PV R SS R IL +V+ +++ + QMDV T FL+G L+E
Subjt: FSLQKNQTWSLVPKPHNQKLIQSKWIYKIK--------------SAKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEE
Query: VIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDACVYWKLSQRGTF---IYLLLYVDDMILVSKDYAEICQLKKQLSS
IYM P+G + D VC+L+K+IYGLKQ+ R W+ F+ + + F +S D C+Y + +G IY+LLYVDD+++ + D + K+ L
Subjt: VIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDACVYWKLSQRGTF---IYLLLYVDDMILVSKDYAEICQLKKQLSS
Query: EYEMKDL-------ASHLKLSSSQCPVTE----QERLEMSNIPYCNAV---------------------------GSTMYLMICTRPD------------
++ M DL +++ + +++ ++ L N+ CNAV G MY+M+CTRPD
Subjt: EYEMKDL-------ASHLKLSSSQCPVTE----QERLEMSNIPYCNAV---------------------------GSTMYLMICTRPD------------
Query: --------------LGYAMSSASVSLCFIKDCDKSTLLEGFTNADNNVADLAKRRSLSGHAFRLYG-NIVSWKVTLQPVVALSTTESEYISLGEAAKEAV
L Y + + L F K+ + G+ ++D +++ R+S +G+ F+++ N++ W Q VA S+TE+EY++L EA +EA+
Subjt: --------------LGYAMSSASVSLCFIKDCDKSTLLEGFTNADNNVADLAKRRSLSGHAFRLYG-NIVSWKVTLQPVVALSTTESEYISLGEAAKEAV
Query: WLKRIVGELLSQEFIPI-IHCDSQSAIHLAKNLSHHERGK
WLK ++ + + PI I+ D+Q I +A N S H+R K
Subjt: WLKRIVGELLSQEFIPI-IHCDSQSAIHLAKNLSHHERGK
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| P0CV72 Secreted RxLR effector protein 161 | 5.0e-15 | 38.97 | Show/hide |
Query: MSNIPYCNAVGSTMYLMICTRPDLG--------------------------YAMSSASVSLCFIKDCDKSTLLEGFTNADNNVADLAKRRSLSGHAFRLY
M N+PY +AVG+ MYLM+ TRPDL Y S+ + L F + + L G+++AD D+ RRS SG+ F+L
Subjt: MSNIPYCNAVGSTMYLMICTRPDLG--------------------------YAMSSASVSLCFIKDCDKSTLLEGFTNADNNVADLAKRRSLSGHAFRLY
Query: GNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWL
G VSW+ Q VALS+TE EY++L EA +EAVWL
Subjt: GNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-94 | 31.78 | Show/hide |
Query: MSSMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK------------------------------------------------
+ SMGG +YF++ ID SRK+W+Y LK KD+ F+ F ++ VE +TGR++K
Subjt: MSSMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQTGREVK------------------------------------------------
Query: ------------------------------SPSTTLDLKTPQE---------------GVK------------------------------GYKIWCLEK
SPS L + P+ G + GY++W K
Subjt: ------------------------------SPSTTLDLKTPQE---------------GVK------------------------------GYKIWCLEK
Query: GINKCIISRDV---ETEVR--VDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQER--------ILIDEGLHSEESSSNNDLQNYQLTRDRVQR
K I SRDV E+EVR D+ + G+ + +P S + +S D + Q E+ +DEG+ E + + Q+ L R +R
Subjt: GINKCIISRDV---ETEVR--VDLEVRPSIGLDVSSDQLPLVSQTEATHQSEFDGIQSQQER--------ILIDEGLHSEESSSNNDLQNYQLTRDRVQR
Query: ERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKS--------------AKG
R RY + V S + +P + +E + + K Q AM+ E+ SLQKN T+ LV P ++ ++ KW++K+K KG
Subjt: ERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIKS--------------AKG
Query: YTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQG
+ QK+G+DF+EIFSPVV+ +SIR IL + D+ +EQ+DV T FLHG+LEE IYM QP+G+EV GK+ MVC+L+KS+YGLKQ+PRQWY++FD+F+ Q
Subjt: YTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQG
Query: FYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD---------------------------------------------
+ + D CVY+K FI LLLYVDDM++V KD I +LK LS ++MKD
Subjt: FYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKD---------------------------------------------
Query: --LASHLKLSSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMSSAS---------------VSLCFIK----DC----DKSTLLEGFTNAD
LA HLKLS CP T +E+ M+ +PY +AVGS MY M+CTRPD+ +A+ S L +++ DC +L+G+T+AD
Subjt: --LASHLKLSSSQCPVTEQERLEMSNIPYCNAVGSTMYLMICTRPDLGYAMSSAS---------------VSLCFIK----DC----DKSTLLEGFTNAD
Query: NNVADLAKRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHERGK
D+ R+S +G+ F G +SW+ LQ VALSTTE+EYI+ E KE +WLKR + EL + +++CDSQSAI L+KN +H R K
Subjt: NNVADLAKRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNLSHHERGK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.2e-40 | 28.29 | Show/hide |
Query: EAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQ-KLIQSKWIYKIK--------------SAKGYTQKEGVDFNEIFSPVVRHSSIRL
E++P T + + ++W++AM +E+ + N TW LVP P + ++ +WI+ K AKGY Q+ G+D+ E FSPV++ +SIR+
Subjt: EAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLVPKPHNQ-KLIQSKWIYKIK--------------SAKGYTQKEGVDFNEIFSPVVRHSSIRL
Query: ILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDACVYWKLSQRG-TFIYL
+L + V I Q+DV FL G L + +YM+QP G+ K + + VC+L K++YGLKQ+PR WY+ ++L GF + D ++ + QRG + +Y+
Subjt: ILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDACVYWKLSQRG-TFIYL
Query: LLYVDDMILVSKDYAEICQLKKQLSSEYEMKD--------------LASHLKLSSSQ------------------CPVTEQERLEMSN-------IPYCN
L+YVDD+++ D + LS + +KD + + L LS + P+ +L + + Y
Subjt: LLYVDDMILVSKDYAEICQLKKQLSSEYEMKD--------------LASHLKLSSSQ------------------CPVTEQERLEMSN-------IPYCN
Query: AVGSTMYLMICTRPDLGYAMSSASVSLCFIKDCDKSTL---LEGFTNADNNVADLAKRRSLSGHAFR--------------------LYGNIVSWKVTLQ
VGS YL TRPD+ YA++ S + + L L N+ L K +LS HA+ L + +SW Q
Subjt: AVGSTMYLMICTRPDLGYAMSSASVSLCFIKDCDKSTL---LEGFTNADNNVADLAKRRSLSGHAFR--------------------LYGNIVSWKVTLQ
Query: PVVALSTTESEYISLGEAAKEAVWLKRIVGEL-LSQEFIPIIHCDSQSAIHLAKNLSHHERGK
V S+TE+EY S+ + E W+ ++ EL + P+I+CD+ A +L N H R K
Subjt: PVVALSTTESEYISLGEAAKEAVWLKRIVGEL-LSQEFIPIIHCDSQSAIHLAKNLSHHERGK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.7e-02 | 43.59 | Show/hide |
Query: RYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQ
RY++ +D F+R W+YPLKQK + E F+ +K +EN+
Subjt: RYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQ
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.9e-43 | 29.75 | Show/hide |
Query: AYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLV-PKPHNQKLIQSKWIYKIK--------------SAKGYTQKEGVDFNEIF
+YA + AA+S +P T + + D +W+ AM +E+ + N TW LV P P + ++ +WI+ K AKGY Q+ G+D+ E F
Subjt: AYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLV-PKPHNQKLIQSKWIYKIK--------------SAKGYTQKEGVDFNEIF
Query: SPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDACVYWK
SPV++ +SIR++L + V I Q+DV FL G L + +YM+QP G+ K + D VCRL K+IYGLKQ+PR WY+ T++L GF + D ++
Subjt: SPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDACVYWK
Query: LSQRG-TFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMK-----------------------------DLASHLKLSSSQ---CPVTEQERLEM---
+ QRG + IY+L+YVDD+++ D + LS + +K DL + + +++ P+ +L +
Subjt: LSQRG-TFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMK-----------------------------DLASHLKLSSSQ---CPVTEQERLEM---
Query: SNIP----YCNAVGSTMYLMICTRPDLGYAMSSASVSLCFIKDCDKSTL---LEGFTNADNNVADLAKRRSLSGHAFR--------------------LY
+ +P Y VGS YL TRPDL YA++ S + D + L L ++ L K +LS HA+ L
Subjt: SNIP----YCNAVGSTMYLMICTRPDLGYAMSSASVSLCFIKDCDKSTL---LEGFTNADNNVADLAKRRSLSGHAFR--------------------LY
Query: GNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGEL-LSQEFIPIIHCDSQSAIHLAKNLSHHERGK
+ +SW Q V S+TE+EY S+ + E W+ ++ EL + P+I+CD+ A +L N H R K
Subjt: GNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGEL-LSQEFIPIIHCDSQSAIHLAKNLSHHERGK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-02 | 40.91 | Show/hide |
Query: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQ
S+ RY++ +D F+R W+YPLKQK + + F+ +K VEN+
Subjt: SMGGLRYFLSIIDAFSRKVWMYPLKQKDETFEKFLEWKKQVENQ
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 7.0e-49 | 29.28 | Show/hide |
Query: QSQQERILIDEGLHSEESSSNNDLQNYQLTRDRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLV
++++ L D HS S + +D+ + + E+ +P+ + + L C A + E P T+ E + W AM+ E+ +++ TW +
Subjt: QSQQERILIDEGLHSEESSSNNDLQNYQLTRDRVQRERQAPIRYGYADLVAYALTCAADSIEAQPLTFEETIVYDSKKQWKDAMEAELFSLQKNQTWSLV
Query: PKPHNQKLIQSKWIYKIK--------------SAKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEV
P N+K I KW+YKIK AKGYTQ+EG+DF E FSPV + +S++LIL I ++ + Q+D++ FL+G+L+E IYM P GY
Subjt: PKPHNQKLIQSKWIYKIK--------------SAKGYTQKEGVDFNEIFSPVVRHSSIRLILFIVVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEV
Query: KGKEDM----VCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKDLAS--
+ + + VC L KSIYGLKQ+ RQW+++F ++ GF ++ D + K++ F+ +L+YVDD+I+ S + A + +LK QL S ++++DL
Subjt: KGKEDM----VCRLHKSIYGLKQSPRQWYIRFDTFILKQGFYRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKDLAS--
Query: ---HLKLSSSQCPVTEQER--------------LEMSNIP--------------------YCNAVGSTMYLMICTRPDLGYAMSSAS-----------VS
L+++ S + +R + S++P Y +G MYL I TR D+ +A++ S +
Subjt: ---HLKLSSSQCPVTEQER--------------LEMSNIP--------------------YCNAVGSTMYLMICTRPDLGYAMSSAS-----------VS
Query: LCFIKDCDKSTLLEGFTNADNNVADLA------------KRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGEL-LSQE
+ I K T+ +G + L RRS +G+ L +++SWK Q VV+ S+ E+EY +L A E +WL + EL L
Subjt: LCFIKDCDKSTLLEGFTNADNNVADLA------------KRRSLSGHAFRLYGNIVSWKVTLQPVVALSTTESEYISLGEAAKEAVWLKRIVGEL-LSQE
Query: FIPIIHCDSQSAIHLAKNLSHHERGK
++ CD+ +AIH+A N HER K
Subjt: FIPIIHCDSQSAIHLAKNLSHHERGK
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.8e-07 | 28.32 | Show/hide |
Query: IYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKDLA--------------SHLKLS--------------------SSQCPVTEQERLEMSNIP----Y
+YLLLYVDD++L + L QLSS + MKDL S L LS S+ P+ + + P +
Subjt: IYLLLYVDDMILVSKDYAEICQLKKQLSSEYEMKDLA--------------SHLKLS--------------------SSQCPVTEQERLEMSNIP----Y
Query: CNAVGSTMYLMICTRPDLGYAMSSASVSL--CFIKDCD---------KSTLLEGF---TNADNNVADL---------AKRRSLSGHAFRLYGNIVSWKVT
+ VG+ YL + TRPD+ YA++ + + D D K T+ G N+ NV + RRS +G L NI+SW
Subjt: CNAVGSTMYLMICTRPDLGYAMSSASVSL--CFIKDCD---------KSTLLEGF---TNADNNVADL---------AKRRSLSGHAFRLYGNIVSWKVT
Query: LQPVVALSTTESEYISLGEAAKEAVW
QP V+ S+TE+EY +L A E W
Subjt: LQPVVALSTTESEYISLGEAAKEAVW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 3.4e-11 | 35 | Show/hide |
Query: YALTCAADSIEAQPLTFEETIVYDSKKQ-WKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIK--------------SAKGYTQKEGVDFNEIFS
Y+LT +I+ +P +++++ K W AM+ EL +L +N+TW LVP P NQ ++ KW++K K AKG+ Q+EG+ F E +S
Subjt: YALTCAADSIEAQPLTFEETIVYDSKKQ-WKDAMEAELFSLQKNQTWSLVPKPHNQKLIQSKWIYKIK--------------SAKGYTQKEGVDFNEIFS
Query: PVVRHSSIRLILFIVVHFDM
PVVR ++IR IL + ++
Subjt: PVVRHSSIRLILFIVVHFDM
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