CuGenDBv2

Gene ID	CSPI05G12190
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein CHROMATIN REMODELING 19
Genome location	Chr5:11120032..11125255
RNA-Seq Expression	CSPI05G12190
Synteny	CSPI05G12190
Gene Ontology terms	GO:0005524 - ATP binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004140399.1 protein CHROMATIN REMODELING 19 [Cucumis sativus]

9.8e-110

100

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Query:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD
        MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD
Subjt:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD

Query:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN
        ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN
Subjt:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN

Query:  FLLLLYQKGVGG
        FLLLLYQKGVGG
Subjt:  FLLLLYQKGVGG

XP_016902524.1 PREDICTED: protein CHROMATIN REMODELING 19 isoform X3 [Cucumis melo]

6.8e-103

94.81

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Query:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD
        MKRVF+EISDEEWSNHSFKPSRVFTKPQT PSIPPPIESFAYR HQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDED+
Subjt:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD

Query:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN
        ESERELTEV DVKSTS++ELEE REDDDDVVGKALQKCAKLSAELKRELYGSSVS  ERYSEVESSSVRIVTQDDINAACK EDSDFEPVLKPYQLVGVN
Subjt:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN

Query:  FLLLLYQKGVGG
        FLLLLYQKGVGG
Subjt:  FLLLLYQKGVGG

XP_038877194.1 protein CHROMATIN REMODELING 19 isoform X1 [Benincasa hispida]

4.0e-103

94.34

Show/hide

Query:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD
        MKRVFEEISDEEWSNHSFKPSRVF+KPQTEPSIPPPIESFAYRP QLYISDESSDDC VVMESSKN+EENLEDEDVEVEGVKSTT VSRGRRFV+DDED+
Subjt:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD

Query:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN
        +SERELTEVCDVKSTSEEE EE REDDDDVVGKALQKCAKLS ELKRELYGSSVSA ERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN
Subjt:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN

Query:  FLLLLYQKGVGG
        FLLLLYQKGVGG
Subjt:  FLLLLYQKGVGG

XP_038877196.1 protein CHROMATIN REMODELING 19 isoform X2 [Benincasa hispida]

4.0e-103

94.34

Show/hide

Query:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD
        MKRVFEEISDEEWSNHSFKPSRVF+KPQTEPSIPPPIESFAYRP QLYISDESSDDC VVMESSKN+EENLEDEDVEVEGVKSTT VSRGRRFV+DDED+
Subjt:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD

Query:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN
        +SERELTEVCDVKSTSEEE EE REDDDDVVGKALQKCAKLS ELKRELYGSSVSA ERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN
Subjt:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN

Query:  FLLLLYQKGVGG
        FLLLLYQKGVGG
Subjt:  FLLLLYQKGVGG

XP_038877197.1 protein CHROMATIN REMODELING 19 isoform X3 [Benincasa hispida]

4.0e-103

94.34

Show/hide

Query:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD
        MKRVFEEISDEEWSNHSFKPSRVF+KPQTEPSIPPPIESFAYRP QLYISDESSDDC VVMESSKN+EENLEDEDVEVEGVKSTT VSRGRRFV+DDED+
Subjt:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD

Query:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN
        +SERELTEVCDVKSTSEEE EE REDDDDVVGKALQKCAKLS ELKRELYGSSVSA ERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN
Subjt:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN

Query:  FLLLLYQKGVGG
        FLLLLYQKGVGG
Subjt:  FLLLLYQKGVGG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CC04 protein CHROMATIN REMODELING 19 isoform X1

3.3e-103

94.81

Show/hide

Query:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD
        MKRVF+EISDEEWSNHSFKPSRVFTKPQT PSIPPPIESFAYR HQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDED+
Subjt:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD

Query:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN
        ESERELTEV DVKSTS++ELEE REDDDDVVGKALQKCAKLSAELKRELYGSSVS  ERYSEVESSSVRIVTQDDINAACK EDSDFEPVLKPYQLVGVN
Subjt:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN

Query:  FLLLLYQKGVGG
        FLLLLYQKGVGG
Subjt:  FLLLLYQKGVGG

A0A1S3CC36 protein CHROMATIN REMODELING 19 isoform X2

3.3e-103

94.81

Show/hide

Query:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD
        MKRVF+EISDEEWSNHSFKPSRVFTKPQT PSIPPPIESFAYR HQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDED+
Subjt:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD

Query:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN
        ESERELTEV DVKSTS++ELEE REDDDDVVGKALQKCAKLSAELKRELYGSSVS  ERYSEVESSSVRIVTQDDINAACK EDSDFEPVLKPYQLVGVN
Subjt:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN

Query:  FLLLLYQKGVGG
        FLLLLYQKGVGG
Subjt:  FLLLLYQKGVGG

A0A1S4E2R3 protein CHROMATIN REMODELING 19 isoform X3

3.3e-103

94.81

Show/hide

Query:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD
        MKRVF+EISDEEWSNHSFKPSRVFTKPQT PSIPPPIESFAYR HQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDED+
Subjt:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD

Query:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN
        ESERELTEV DVKSTS++ELEE REDDDDVVGKALQKCAKLSAELKRELYGSSVS  ERYSEVESSSVRIVTQDDINAACK EDSDFEPVLKPYQLVGVN
Subjt:  ESERELTEVCDVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVN

Query:  FLLLLYQKGVGG
        FLLLLYQKGVGG
Subjt:  FLLLLYQKGVGG

A0A6J1FXC0 protein CHROMATIN REMODELING 19

1.1e-95

86.98

Show/hide

Query:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD
        MKRVF+EISD+EWSNHSFKPSRVF+KPQT+P IPPPIESFAYRP  LYISD+S DDCVVVMESSKN++E+LED+DVEVEGVKS+TA+SRGRRFVVDDED+
Subjt:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD

Query:  ESERELTEVCDVKSTS---EEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLV
        ESE+ELTEVCDV+STS   EEE EE RED+DDVVG AL+KCAKLSAELKRELYGSSVSA ERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLV
Subjt:  ESERELTEVCDVKSTS---EEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLV

Query:  GVNFLLLLYQKGVGG
        GVNFLLLLY+KGVGG
Subjt:  GVNFLLLLYQKGVGG

A0A6J1JU99 protein CHROMATIN REMODELING 19

4.3e-95

86.11

Show/hide

Query:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD
        MKRVF+EISD+EWSNHSFKPSRVF+KPQT+P IPPPIESFAYRP  LYISD+S DDCVVVMESSKN++E+LED+DVEVEGVKS+T +SRGRRFVVDDED+
Subjt:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDD

Query:  ESERELTEVCDVKSTS----EEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQL
        ESE+ELTEVCDV+STS    EEE EE RED+DDVVG AL+KCAKLSAELKRELYGSSVSA ERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQL
Subjt:  ESERELTEVCDVKSTS----EEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQL

Query:  VGVNFLLLLYQKGVGG
        VGVNFLLLLY+KGVGG
Subjt:  VGVNFLLLLYQKGVGG

SwissProt top hits

e value

%identity

Alignment

Q9ZUL5 Protein CHROMATIN REMODELING 19

2.5e-47

51.04

Show/hide

Query:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSI------PPPIESFAYR--PHQLYISDESSD-DCVVVMESSK--------NYEENLEDEDVEVEGVKS
        MKR F+EIS+EEWS HSF  SRV  +P+T           P IESFA+R     + I   SSD DCV + +           N E+ L +++ EVE  K 
Subjt:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSI------PPPIESFAYR--PHQLYISDESSD-DCVVVMESSK--------NYEENLEDEDVEVEGVKS

Query:  TTAVSR-GRRFVVDDE----DDESERELTEVCDVKSTSEEELEEG-------REDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIV
            +R GRRFV++DE    DD+ E E        S SE+E   G       R +D+DVVGKALQKCAK+SA+L++ELYG+S   ++RYSEVE+S+VRIV
Subjt:  TTAVSR-GRRFVVDDE----DDESERELTEVCDVKSTSEEELEEG-------REDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIV

Query:  TQDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
        TQ+DI+ ACKAEDSDF+P+LKPYQLVGVNFLLLLY+KG+ G
Subjt:  TQDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG

Arabidopsis top hits

e value

%identity

Alignment

AT2G02090.1 SNF2 domain-containing protein / helicase domain-containing protein

1.7e-48

51.04

Show/hide

Query:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSI------PPPIESFAYR--PHQLYISDESSD-DCVVVMESSK--------NYEENLEDEDVEVEGVKS
        MKR F+EIS+EEWS HSF  SRV  +P+T           P IESFA+R     + I   SSD DCV + +           N E+ L +++ EVE  K 
Subjt:  MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSI------PPPIESFAYR--PHQLYISDESSD-DCVVVMESSK--------NYEENLEDEDVEVEGVKS

Query:  TTAVSR-GRRFVVDDE----DDESERELTEVCDVKSTSEEELEEG-------REDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIV
            +R GRRFV++DE    DD+ E E        S SE+E   G       R +D+DVVGKALQKCAK+SA+L++ELYG+S   ++RYSEVE+S+VRIV
Subjt:  TTAVSR-GRRFVVDDE----DDESERELTEVCDVKSTSEEELEEG-------REDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIV

Query:  TQDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
        TQ+DI+ ACKAEDSDF+P+LKPYQLVGVNFLLLLY+KG+ G
Subjt:  TQDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGCGCGTCTTCGAAGAAATTTCCGACGAAGAGTGGTCCAATCACTCCTTCAAGCCCTCTCGCGTCTTCACAAAACCACAGACTGAACCTTCGATCCCTCCTCCGAT
TGAATCTTTCGCATACCGACCCCACCAGCTCTATATTTCCGACGAGAGTAGCGACGATTGTGTCGTAGTCATGGAAAGTTCCAAAAATTATGAGGAAAATTTGGAGGACG
AGGATGTCGAGGTTGAGGGAGTGAAATCCACCACGGCAGTGAGTCGTGGCCGTCGGTTTGTGGTTGATGACGAAGATGATGAAAGTGAGAGGGAATTGACTGAGGTTTGT
GATGTAAAGTCGACGAGCGAGGAGGAGCTGGAGGAGGGTAGGGAGGATGACGATGATGTCGTCGGTAAGGCTTTGCAGAAGTGTGCAAAATTATCTGCCGAGTTGAAGAG
AGAGCTGTACGGCTCTTCGGTTTCTGCCTCTGAACGATATTCAGAAGTGGAGTCTTCTTCCGTTAGGATAGTCACCCAGGATGATATTAATGCGGCTTGCAAGGCTGAAG
ATTCTGATTTTGAGCCTGTTCTCAAGCCATATCAGCTGGTTGGCGTGAACTTTCTTCTTCTTTTGTATCAGAAGGGAGTTGGTGGAGGTACTGAATACTGCTCTTACCAT
CATAATGCGTATAACATAAATTTGTAG

mRNA sequence

Show/hide mRNA sequence

CATTAAACTCATTCTAAATGAGTGCTTTCGGCATGTGAAGTAAACCTCCCTAAAATGAAAATTGGTCCTCTATTCTATTTACGTAATTAACAAAAAAAAAAGAAAAGAAA
AAAGAAAGAAAAAAAGGAAAAAAAAGGGAAAAACACTTTTACGTGAACTCTTTCGCACAGTATACGCCGAACGGCGGTCGTTCCTTTCGTCTTCTTCTTCTTCATTTCTA
ACAGTCTTCACCGCCGGAAAATTCTCTCAACTTCTCCCTTACAGCATGAAGCGCGTCTTCGAAGAAATTTCCGACGAAGAGTGGTCCAATCACTCCTTCAAGCCCTCTCG
CGTCTTCACAAAACCACAGACTGAACCTTCGATCCCTCCTCCGATTGAATCTTTCGCATACCGACCCCACCAGCTCTATATTTCCGACGAGAGTAGCGACGATTGTGTCG
TAGTCATGGAAAGTTCCAAAAATTATGAGGAAAATTTGGAGGACGAGGATGTCGAGGTTGAGGGAGTGAAATCCACCACGGCAGTGAGTCGTGGCCGTCGGTTTGTGGTT
GATGACGAAGATGATGAAAGTGAGAGGGAATTGACTGAGGTTTGTGATGTAAAGTCGACGAGCGAGGAGGAGCTGGAGGAGGGTAGGGAGGATGACGATGATGTCGTCGG
TAAGGCTTTGCAGAAGTGTGCAAAATTATCTGCCGAGTTGAAGAGAGAGCTGTACGGCTCTTCGGTTTCTGCCTCTGAACGATATTCAGAAGTGGAGTCTTCTTCCGTTA
GGATAGTCACCCAGGATGATATTAATGCGGCTTGCAAGGCTGAAGATTCTGATTTTGAGCCTGTTCTCAAGCCATATCAGCTGGTTGGCGTGAACTTTCTTCTTCTTTTG
TATCAGAAGGGAGTTGGTGGAGGTACTGAATACTGCTCTTACCATCATAATGCGTATAACATAAATTTGTAGTAACTGCC

Protein sequence

Show/hide protein sequence

MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVVMESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVC
DVKSTSEEELEEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGGGTEYCSYH
HNAYNINL

CSPI05G12190 (gene) of Cucumber (PI 183967) v1 genome