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CSPI05G12410 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G12410
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionSEC12-like protein 2
Genome locationChr5:11599671..11601989
RNA-Seq ExpressionCSPI05G12410
SyntenyCSPI05G12410
Gene Ontology termsGO:0003400 - regulation of COPII vesicle coating (biological process)
GO:0006817 - phosphate ion transport (biological process)
GO:0009306 - protein secretion (biological process)
GO:0016036 - cellular response to phosphate starvation (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component)
GO:0005096 - GTPase activator activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR011047 - Quinoprotein alcohol dehydrogenase-like superfamily
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065994.1 SEC12-like protein 2 [Cucumis melo var. makuwa]5.3e-5893.13Show/hide
Query:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA
        M+LYTA+VTGKGGSIVSWNATTWR VASKLITRDNITAFNVS+SGRLLACGTTQGDVLIMNSTSL+V KIVKKAHLGFVTALSFSPDSRALVSASMDSSA
Subjt:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA

Query:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFF
        RVTVIEEEQKKGMN+WIIIFILLIAIA Y+F
Subjt:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFF

KAG7030560.1 SEC12-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-5482.35Show/hide
Query:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA
        MVLYTA+VTG+GGSI++WNATTWRRVASKLITRDNITAFNVS++G+LLACGTTQGDVL++NSTS++V++IVKKAHLGFVTALSFS DSRAL SASMDSSA
Subjt:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA

Query:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFFHSTIL
        RVTVIEE+QKKGM++W+IIFILLIAIA YF ++ IL
Subjt:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFFHSTIL

XP_004140431.1 SEC12-like protein 2 [Cucumis sativus]3.9e-6198.47Show/hide
Query:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA
        MVLYTA+VTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA
Subjt:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA

Query:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFF
        RVTVIEEEQKKGMNMWIIIFILLIAIA YFF
Subjt:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFF

XP_008454782.1 PREDICTED: SEC12-like protein 2 [Cucumis melo]5.3e-5893.13Show/hide
Query:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA
        M+LYTA+VTGKGGSIVSWNATTWR VASKLITRDNITAFNVS+SGRLLACGTTQGDVLIMNSTSL+V KIVKKAHLGFVTALSFSPDSRALVSASMDSSA
Subjt:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA

Query:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFF
        RVTVIEEEQKKGMN+WIIIFILLIAIA Y+F
Subjt:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFF

XP_038892140.1 SEC12-like protein 2 [Benincasa hispida]1.9e-5585.71Show/hide
Query:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA
        MVLYTA+VTGKGGSIVSWNA TWRRVASKLITRDNITAFNVS++GRLLACGTTQGDVLI+NSTS++V+KIVKKAHLGFVTALSFSPDSRAL SASMDSSA
Subjt:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA

Query:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFFHS
        RVTVIEEEQK G N+WI+IFI+LIA+A YF ++
Subjt:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFFHS

TrEMBL top hitse value%identityAlignment
A0A0A0KMM7 WD_REPEATS_REGION domain-containing protein1.9e-6198.47Show/hide
Query:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA
        MVLYTA+VTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA
Subjt:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA

Query:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFF
        RVTVIEEEQKKGMNMWIIIFILLIAIA YFF
Subjt:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFF

A0A1S3C056 SEC12-like protein 22.6e-5893.13Show/hide
Query:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA
        M+LYTA+VTGKGGSIVSWNATTWR VASKLITRDNITAFNVS+SGRLLACGTTQGDVLIMNSTSL+V KIVKKAHLGFVTALSFSPDSRALVSASMDSSA
Subjt:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA

Query:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFF
        RVTVIEEEQKKGMN+WIIIFILLIAIA Y+F
Subjt:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFF

A0A5A7VFB4 SEC12-like protein 22.6e-5893.13Show/hide
Query:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA
        M+LYTA+VTGKGGSIVSWNATTWR VASKLITRDNITAFNVS+SGRLLACGTTQGDVLIMNSTSL+V KIVKKAHLGFVTALSFSPDSRALVSASMDSSA
Subjt:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA

Query:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFF
        RVTVIEEEQKKGMN+WIIIFILLIAIA Y+F
Subjt:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFF

A0A6J1FTE5 SEC12-like protein 21.3e-5482.35Show/hide
Query:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA
        MVLYTA+VTG+GGSI++WNATTWRRVASKLITRDNITAFNVS++G+LLACGTTQGDVL++NSTS++V++IVKKAHLGFVTALSFS DSRAL SASMDSSA
Subjt:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA

Query:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFFHSTIL
        RVTVIEE+QKKGM++W+IIFILLIAIA YF ++ IL
Subjt:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFFHSTIL

A0A6J1J4E0 SEC12-like protein 25.0e-5481.62Show/hide
Query:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA
        MVLYTA+VTG+GGSI++WNATTWRRVASKLITRDNITAFNVS++G+LLACGT QGDVL++NSTS++V++IVKKAHLGFVTALSFS DSRAL SASMDSSA
Subjt:  MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA

Query:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFFHSTIL
        RVTVIEE+QKKGM++W+IIFILLIAIA YF ++ IL
Subjt:  RVTVIEEEQKKGMNMWIIIFILLIAIATYFFHSTIL

SwissProt top hitse value%identityAlignment
P25365 Putative guanine nucleotide-exchange factor SED42.1e-0428.3Show/hide
Query:  RVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSARVTVIEEEQKKGM-NMW--IIIFI
        + AS +   + IT+ +VS + + +A  +    V I++   L++ ++V + H   +T ++FSPDSR L S SM ++  V  +       + N+W   + F+
Subjt:  RVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSARVTVIEEEQKKGM-NMW--IIIFI

Query:  LLIAIA
        LL+ +A
Subjt:  LLIAIA

Q39221 SEC12-like protein 22.4e-2951.52Show/hide
Query:  VLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSAR
        VLY A+ T +GGSI++ +   W+R  SK I +++I+AFNVS+ G+LLA GT +GDVLI+ ST +Q  ++VKKAHLG VTAL+FSPDSR LVS S DS AR
Subjt:  VLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSAR

Query:  VTVIEEE-QKKGMNMW-IIIFILLIAIATYFF
        +T+IE++  K G+  W +++ I+L+ +  Y++
Subjt:  VTVIEEE-QKKGMNMW-IIIFILLIAIATYFF

Q8GYE0 SEC12-like protein 11.1e-0525.56Show/hide
Query:  LYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLG-FVTALSFSPDSRALVSASMDSSAR
        L+ A+  G    +  ++ +TW+++  K ++R   +   VS  G+ +A G   GDV +    ++++    K+ HLG  + +L F P  R +++ S +    
Subjt:  LYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLG-FVTALSFSPDSRALVSASMDSSAR

Query:  VTVIE-EEQKKGMNMWIIIFILLIA--IATYFF
        VT +   ++ K   ++ ++F L +A  IA Y F
Subjt:  VTVIE-EEQKKGMNMWIIIFILLIA--IATYFF

Arabidopsis top hitse value%identityAlignment
AT2G01470.1 SEC12P-like 2 protein1.7e-3051.52Show/hide
Query:  VLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSAR
        VLY A+ T +GGSI++ +   W+R  SK I +++I+AFNVS+ G+LLA GT +GDVLI+ ST +Q  ++VKKAHLG VTAL+FSPDSR LVS S DS AR
Subjt:  VLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSAR

Query:  VTVIEEE-QKKGMNMW-IIIFILLIAIATYFF
        +T+IE++  K G+  W +++ I+L+ +  Y++
Subjt:  VTVIEEE-QKKGMNMW-IIIFILLIAIATYFF

AT3G52190.1 phosphate transporter traffic facilitator17.7e-0725.56Show/hide
Query:  LYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLG-FVTALSFSPDSRALVSASMDSSAR
        L+ A+  G    +  ++ +TW+++  K ++R   +   VS  G+ +A G   GDV +    ++++    K+ HLG  + +L F P  R +++ S +    
Subjt:  LYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLG-FVTALSFSPDSRALVSASMDSSAR

Query:  VTVIE-EEQKKGMNMWIIIFILLIA--IATYFF
        VT +   ++ K   ++ ++F L +A  IA Y F
Subjt:  VTVIE-EEQKKGMNMWIIIFILLIA--IATYFF

AT5G50550.1 Transducin/WD40 repeat-like superfamily protein7.4e-3456.06Show/hide
Query:  VLYTASVTGKGGSIVSWNATTWRRVASKLITRDN-ITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA
        VLY A+ T +GGSI++W+ T+WRR +SKLI R+N I+AFNVS+ G+LLA GT +GDVLI++ST +Q  +IVKKAHLG VTAL+FSPDSR LVS S DS A
Subjt:  VLYTASVTGKGGSIVSWNATTWRRVASKLITRDN-ITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA

Query:  RVTVIEEE-QKKGMNMWI--IIFILLIAIATY
        R+TVI+++ +K+ + +W+  ++F+L+  +  Y
Subjt:  RVTVIEEE-QKKGMNMWI--IIFILLIAIATY

AT5G50650.1 Transducin/WD40 repeat-like superfamily protein7.4e-3456.06Show/hide
Query:  VLYTASVTGKGGSIVSWNATTWRRVASKLITRDN-ITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA
        VLY A+ T +GGSI++W+ T+WRR +SKLI R+N I+AFNVS+ G+LLA GT +GDVLI++ST +Q  +IVKKAHLG VTAL+FSPDSR LVS S DS A
Subjt:  VLYTASVTGKGGSIVSWNATTWRRVASKLITRDN-ITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSA

Query:  RVTVIEEE-QKKGMNMWI--IIFILLIAIATY
        R+TVI+++ +K+ + +W+  ++F+L+  +  Y
Subjt:  RVTVIEEE-QKKGMNMWI--IIFILLIAIATY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTATACACTGCTTCAGTGACTGGCAAAGGTGGAAGCATTGTATCTTGGAATGCAACCACTTGGAGGAGGGTAGCCTCAAAGCTCATAACTCGTGATAATATTAC
TGCATTCAATGTTTCATCTAGTGGAAGACTCCTTGCCTGTGGTACAACTCAGGGAGACGTTCTGATCATGAATTCAACCAGCTTGCAAGTTCGAAAGATAGTTAAAAAGG
CACACCTTGGTTTTGTAACGGCATTGAGCTTTTCCCCCGATTCAAGAGCTCTGGTTTCTGCATCAATGGACTCCAGTGCTAGGGTGACTGTAATTGAGGAGGAGCAGAAA
AAAGGAATGAACATGTGGATCATCATATTCATCTTGCTAATTGCTATTGCTACTTATTTTTTTCATTCAACAATCCTGAATTTCACATAA
mRNA sequenceShow/hide mRNA sequence
GGATGAGGTTTTTATCTCATGCAAATTCTCTTTGACCAACAATGGGGATATGGTTTTATACACTGCTTCAGTGACTGGCAAAGGTGGAAGCATTGTATCTTGGAATGCAA
CCACTTGGAGGAGGGTAGCCTCAAAGCTCATAACTCGTGATAATATTACTGCATTCAATGTTTCATCTAGTGGAAGACTCCTTGCCTGTGGTACAACTCAGGGAGACGTT
CTGATCATGAATTCAACCAGCTTGCAAGTTCGAAAGATAGTTAAAAAGGCACACCTTGGTTTTGTAACGGCATTGAGCTTTTCCCCCGATTCAAGAGCTCTGGTTTCTGC
ATCAATGGACTCCAGTGCTAGGGTGACTGTAATTGAGGAGGAGCAGAAAAAAGGAATGAACATGTGGATCATCATATTCATCTTGCTAATTGCTATTGCTACTTATTTTT
TTCATTCAACAATCCTGAATTTCACATAAGTTTGAGGTTCCCACCCTTTTTAATGGTTGAAATGAAGGTGGGAATATAGAGGAACTCAGAGCCTAACAGTTTGAATTGAA
ACCGTTTCTTTTTCTTTTACTTTCCCTTGACAATGACATTAGTTATATTCAAATTCAAATAAGTAGTATCCCAATTCTATGTTACATGTAAAATTCCCACATTTTTGTTA
GTGTTCAAAATTGAAATCTTTTGACATTTACTTTGTAATTTAGTTGGAT
Protein sequenceShow/hide protein sequence
MVLYTASVTGKGGSIVSWNATTWRRVASKLITRDNITAFNVSSSGRLLACGTTQGDVLIMNSTSLQVRKIVKKAHLGFVTALSFSPDSRALVSASMDSSARVTVIEEEQK
KGMNMWIIIFILLIAIATYFFHSTILNFT