| GenBank top hits | e value | %identity | Alignment |
|---|
| RVW65227.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 5.2e-19 | 31.29 | Show/hide |
Query: IGVAHGEKPEKFSGVDFKRWQQKMLFYLTTLNLAKFLTEDAPILPKGESD---------------------------------KEKQLAK----------
I V+ GEKPEKFSG++FKRWQQKMLFYLTTLNLA+FLTEDAP L + E D +K+ AK
Subjt: IGVAHGEKPEKFSGVDFKRWQQKMLFYLTTLNLAKFLTEDAPILPKGESD---------------------------------KEKQLAK----------
Query: ---------------------------------------------------------------KHVQAHITK---------VDEVSDVVADIDLRAVISE
K V + K +D+++ V+DIDL AV+SE
Subjt: ---------------------------------------------------------------KHVQAHITK---------VDEVSDVVADIDLRAVISE
Query: CNMV----------------------------------------------KGQDKVILKMTFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKL
N+V KGQ KVILKMT GKELTL NVL+VP+IRKNLVSGSLL+ +GF+L
Subjt: CNMV----------------------------------------------KGQDKVILKMTFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKL
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| RVW65227.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.4e-109 | 61.68 | Show/hide |
Query: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
+K A+ +EI+SI+ NHTWELVDLP G KPL KWIFKRK+K DGSIDKYKA+LV KGY+Q + LDYFDT+SPVTRI SIRM++ I AL EIHQMDVKT
Subjt: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
Query: TFLNDELDEEIYMQQPEG-----------------------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKN
FLN +LDEEIYM+QPE T L+LSQSHYVDKIL K+ K + +A+TP+D +LHLSKN
Subjt: TFLNDELDEEIYMQQPEG-----------------------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKN
Query: NGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLG
G S++Q+EYSR+IGSLMY+MSCTRP IAY VSKLS Y SNPG HW+ I+R+ +YL++T++Y LHYTRYPAVLEG SD NWIS+ KDSKS +GY+FTLG
Subjt: NGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLG
Query: GGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
G AVSWKS KQ I RSTMESEFIALDK GEEAE
Subjt: GGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
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| RVX00298.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.8e-109 | 60.29 | Show/hide |
Query: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
+K A+ +EI+SI+ NHTWELVDLP G KPL KWIFKRK+K DGSIDKYKA+LV KGY+Q +GLDYFDT+SPVTRI SIRM++ I AL EIHQMDVKT
Subjt: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
Query: TFLNDELDEEIYMQQPEG----------------------------------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKT
FLN +LDEEIYM+QPEG T L+LSQSHYVDKIL K+ K + +A+T
Subjt: TFLNDELDEEIYMQQPEG----------------------------------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKT
Query: PIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDS
P+D +LHLSKN G S++Q+EYSRIIGSLMY+MSCTRP IAY V KLS Y SNPG HW+ I+R+ +YL++T++Y LHYTRYPAVLEG SD NWIS+ KDS
Subjt: PIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDS
Query: KSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
KS +GY+FTLGG AVSWKS KQ I RSTMESEFIALDK GEEAE
Subjt: KSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
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| RVX00298.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 3.6e-12 | 78 | Show/hide |
Query: IGVAHGEKPEKFSGVDFKRWQQKMLFYLTTLNLAKFLTEDAPILPKGESD
I V+ GEKPEKFSG++FKRWQQKMLFYLTTLNLA+FLTEDAP L + E D
Subjt: IGVAHGEKPEKFSGVDFKRWQQKMLFYLTTLNLAKFLTEDAPILPKGESD
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| RVX00298.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 7.5e-10 | 36.96 | Show/hide |
Query: KGESDKEKQLAKKHVQAHITKVDEVSDVVADIDLRAVISECNMV----------------------------------------------KGQDKVILKM
+G + +L KK+ +D+++ V DIDL AV+SE N+V KGQ KVILKM
Subjt: KGESDKEKQLAKKHVQAHITKVDEVSDVVADIDLRAVISECNMV----------------------------------------------KGQDKVILKM
Query: TFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKLAVNN
T GKELTL NVL+VP+IRKNLVSGSLL+ +GF+L ++
Subjt: TFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKLAVNN
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| RVX09747.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 3.5e-116 | 37.09 | Show/hide |
Query: IGVAHGEKPEKFSGVDFKRWQQKMLFYLTTLNLAKFLTEDAPILPK------------------------------------------------------
I V+ GEKPEKFSG++FKRWQQKMLFYLTTLNLA+FLTEDAP L +
Subjt: IGVAHGEKPEKFSGVDFKRWQQKMLFYLTTLNLAKFLTEDAPILPK------------------------------------------------------
Query: ------------------------------------------------------------------------GESDKEK---------------------
G+S K K
Subjt: ------------------------------------------------------------------------GESDKEK---------------------
Query: -------------------QLAKKHVQAHITKVDEVSDVVADIDLRAVISECNMV---------------------------------------------
+L KK+ +D+++ V DIDL AV+S+ N+V
Subjt: -------------------QLAKKHVQAHITKVDEVSDVVADIDLRAVISECNMV---------------------------------------------
Query: -KGQDKVILKMTFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKL-------------------------------------------------------
KGQ KVILKMT GKELTL NVL+V +IRKNLVSGSLL+ +GF+L
Subjt: -KGQDKVILKMTFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKL-------------------------------------------------------
Query: --------------------AVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLI
+ +EI+SI+ NHTWELVDLP G KPL KWIFKRK+K DGSIDKYKA+LV KGY+Q +GLDYFDT+SPVTRI SIRM++
Subjt: --------------------AVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLI
Query: TILALHGFEIHQMDVKTTFLNDELDEEIYMQQPEG-----------------------------------------------------------------
I AL EIHQMDVKT FLN +LDEEIYM+QPEG
Subjt: TILALHGFEIHQMDVKTTFLNDELDEEIYMQQPEG-----------------------------------------------------------------
Query: ---------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGH
T L SQSHYVDKIL K+ K + +A+TP+D +LHLSKN G S++Q+EYSR+IGSLMY+MSCTR IAY VSKLS Y SNPG
Subjt: ---------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGH
Query: DHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
HW+ I+R+ +YL++T++Y LHYTRYPAVLEG SD NWIS+ KDSKS +GY+FTLGG AVSWKS KQ I RSTMESEFIALDK GEEAE
Subjt: DHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
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| RVX22336.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 4.9e-110 | 60.29 | Show/hide |
Query: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
+K A+ +EI+SI+ NHTWELVDLP G KPL KWIFKRK+K DGSIDKYKA+LV KGY+Q +GLDYFDT+SPVTRI SIRM++ I AL EIHQMDVKT
Subjt: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
Query: TFLNDELDEEIYMQQPEG----------------------------------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKT
FLN +LDEEIYM+QPEG T L+LSQSHYVDKIL K+ K + +A+T
Subjt: TFLNDELDEEIYMQQPEG----------------------------------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKT
Query: PIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDS
P+D +LHLSKN G S++Q+EYSR+IGSLMY+MSCTRP IAY VSKLS Y SNPG HW+ I+R+ +YL++T++Y LHYTRYPAVLEG SD NWIS+ KDS
Subjt: PIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDS
Query: KSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
KS +GY+FTLGG AVSWKS KQ+ I RSTMESEFIALDK GEEAE
Subjt: KSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
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| RVX22336.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 4.8e-09 | 37.31 | Show/hide |
Query: KGESDKEKQLAKKHVQAHITKVDEVSDVVADIDLRAVISECNMV----------------------------------------------KGQDKVILKM
+G + +L KK+ +D+++ V+DIDL AV+SE N+V KGQ KVILKM
Subjt: KGESDKEKQLAKKHVQAHITKVDEVSDVVADIDLRAVISECNMV----------------------------------------------KGQDKVILKM
Query: TFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKL
T GKELTL NVL+V +IRKNLVSGSLL+ +GF+L
Subjt: TFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKL
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| RVX22336.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 8.3e-110 | 61.68 | Show/hide |
Query: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
+K A+ +EI+SI+ NHTWELVDLP G KPL KWIFKRK+K DGSIDKYKA+LV KGY+Q +GLDYFDT+SPVTRI SIRM++ I AL EIHQMDVKT
Subjt: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
Query: TFLNDELDEEIYMQQPEG-----------------------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKN
FLN +LDEEIYM+QPE T L+LSQSHYVDKIL K+ K + +A+TP+D +LHLSKN
Subjt: TFLNDELDEEIYMQQPEG-----------------------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKN
Query: NGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLG
G S++Q+EYSR+IGSLMY+MSCTRP IAY VSKLS Y SNPG HW+ I+R+ +YL++T++Y LHYTRYPAVLEG SD NWIS+ KDSKS +GY+FTLG
Subjt: NGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLG
Query: GGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
G AVSWKS KQ I RSTMESEFIALDK GEEA+
Subjt: GGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9F5X3 Integrase catalytic domain-containing protein | 7.3e-11 | 69.09 | Show/hide |
Query: SECNMVKGQDKVILKMTFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKLAVNNE
S + V+G+ KV+LKM+ GKELTLN+VLHVPDIRKNLVSGSLLSKNGF+L ++
Subjt: SECNMVKGQDKVILKMTFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKLAVNNE
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| A0A2N9GPK3 Integrase catalytic domain-containing protein | 8.6e-113 | 59.09 | Show/hide |
Query: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
+K AVN+EIESI+ NHTWELVDLP G KPLG KWIFKRK+K DGSIDKYKA+LV KGYKQ +G+DYFDT+SPVTRITSIRMLI I AL+ EIHQMDVKT
Subjt: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
Query: TFLNDELDEEIYMQQPEG---------------------------------------------------------------------------------T
FLN ELDEEIYM+QPEG T
Subjt: TFLNDELDEEIYMQQPEG---------------------------------------------------------------------------------T
Query: PQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYT
GLVLSQSHY+ K+L+K+ ++ + KTPID +LHL+KN G+ I+QLEYS+IIGSLMYIM+CTRP IAY VSKLS Y SNPG DHWKAI+R+ YLKYT
Subjt: PQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYT
Query: KNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
NY +HYTRYPAVLEG SD NWIS T D+KST+GY+FTLGG AVSWKS KQ CI RST+ESEFIALDKAGEEAE
Subjt: KNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
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| A0A2N9GPK3 Integrase catalytic domain-containing protein | 7.3e-11 | 69.09 | Show/hide |
Query: SECNMVKGQDKVILKMTFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKLAVNNE
S + V+G+ KV+LKM+ GKELTLN+VLHVPDIRKNLVSGSLLSKNGF+L ++
Subjt: SECNMVKGQDKVILKMTFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKLAVNNE
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| A0A2N9GPK3 Integrase catalytic domain-containing protein | 8.6e-113 | 58.82 | Show/hide |
Query: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
+K AVN+EIESI+ NHTWELVDLP G KPLG KWIFKRK+K DGSIDKYKA+LV KGYKQ +G+DYFDT+SPVTRITSIRMLI I AL+ EIHQMDVKT
Subjt: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
Query: TFLNDELDEEIYMQQPEG---------------------------------------------------------------------------------T
FLN ELDEEIYM+QPEG T
Subjt: TFLNDELDEEIYMQQPEG---------------------------------------------------------------------------------T
Query: PQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYT
GLVLSQ+HY+ K+L+K+ ++ + KTP+D +LHL+KN G+ I+QLEYS+IIGSLMYIM+CTRP IAY VSKLS Y SNPG DHWKAI+R+ YLKYT
Subjt: PQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYT
Query: KNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
NY +HYTRYPAVLEG SD NWIS T D+KST+GY+FTLGG AVSWKS KQ CI RSTMESEFIALDKAGEEAE
Subjt: KNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
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| A0A438JLD2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-116 | 37.09 | Show/hide |
Query: IGVAHGEKPEKFSGVDFKRWQQKMLFYLTTLNLAKFLTEDAPILPK------------------------------------------------------
I V+ GEKPEKFSG++FKRWQQKMLFYLTTLNLA+FLTEDAP L +
Subjt: IGVAHGEKPEKFSGVDFKRWQQKMLFYLTTLNLAKFLTEDAPILPK------------------------------------------------------
Query: ------------------------------------------------------------------------GESDKEK---------------------
G+S K K
Subjt: ------------------------------------------------------------------------GESDKEK---------------------
Query: -------------------QLAKKHVQAHITKVDEVSDVVADIDLRAVISECNMV---------------------------------------------
+L KK+ +D+++ V DIDL AV+S+ N+V
Subjt: -------------------QLAKKHVQAHITKVDEVSDVVADIDLRAVISECNMV---------------------------------------------
Query: -KGQDKVILKMTFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKL-------------------------------------------------------
KGQ KVILKMT GKELTL NVL+V +IRKNLVSGSLL+ +GF+L
Subjt: -KGQDKVILKMTFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKL-------------------------------------------------------
Query: --------------------AVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLI
+ +EI+SI+ NHTWELVDLP G KPL KWIFKRK+K DGSIDKYKA+LV KGY+Q +GLDYFDT+SPVTRI SIRM++
Subjt: --------------------AVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLI
Query: TILALHGFEIHQMDVKTTFLNDELDEEIYMQQPEG-----------------------------------------------------------------
I AL EIHQMDVKT FLN +LDEEIYM+QPEG
Subjt: TILALHGFEIHQMDVKTTFLNDELDEEIYMQQPEG-----------------------------------------------------------------
Query: ---------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGH
T L SQSHYVDKIL K+ K + +A+TP+D +LHLSKN G S++Q+EYSR+IGSLMY+MSCTR IAY VSKLS Y SNPG
Subjt: ---------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGH
Query: DHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
HW+ I+R+ +YL++T++Y LHYTRYPAVLEG SD NWIS+ KDSKS +GY+FTLGG AVSWKS KQ I RSTMESEFIALDK GEEAE
Subjt: DHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
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| A0A438KMB2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-110 | 60.29 | Show/hide |
Query: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
+K A+ +EI+SI+ NHTWELVDLP G KPL KWIFKRK+K DGSIDKYKA+LV KGY+Q +GLDYFDT+SPVTRI SIRM++ I AL EIHQMDVKT
Subjt: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
Query: TFLNDELDEEIYMQQPEG----------------------------------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKT
FLN +LDEEIYM+QPEG T L+LSQSHYVDKIL K+ K + +A+T
Subjt: TFLNDELDEEIYMQQPEG----------------------------------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKT
Query: PIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDS
P+D +LHLSKN G S++Q+EYSR+IGSLMY+MSCTRP IAY VSKLS Y SNPG HW+ I+R+ +YL++T++Y LHYTRYPAVLEG SD NWIS+ KDS
Subjt: PIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDS
Query: KSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
KS +GY+FTLGG AVSWKS KQ+ I RSTMESEFIALDK GEEAE
Subjt: KSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
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| A0A438KMB2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-09 | 37.31 | Show/hide |
Query: KGESDKEKQLAKKHVQAHITKVDEVSDVVADIDLRAVISECNMV----------------------------------------------KGQDKVILKM
+G + +L KK+ +D+++ V+DIDL AV+SE N+V KGQ KVILKM
Subjt: KGESDKEKQLAKKHVQAHITKVDEVSDVVADIDLRAVISECNMV----------------------------------------------KGQDKVILKM
Query: TFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKL
T GKELTL NVL+V +IRKNLVSGSLL+ +GF+L
Subjt: TFGKELTLNNVLHVPDIRKNLVSGSLLSKNGFKL
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| A0A438KMB2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.1e-110 | 55.5 | Show/hide |
Query: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
+K AVN+EIESI+ NHTWELVDLP G KPLG KWIFKRK+K DGSIDKYKA+LV KGYKQ +G+DYFDT+SPVTRITSIRMLI I AL+ EIHQMDVKT
Subjt: FKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVKT
Query: TFLNDELDEEIYMQQPEG----------------------------------------------------------------------------------
FLN ELDEEIYM+QPEG
Subjt: TFLNDELDEEIYMQQPEG----------------------------------------------------------------------------------
Query: -------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSK
T GLVLSQSHY+ K+L+K+ ++ + KTPID +LHL+KN G+ I+QLEYS+IIGSLMYIM+CTRP IAY VSK
Subjt: -------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYVVSK
Query: LSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
LS Y SNPG DHWKAI+R+ YLKYT NY +HYTRYPAVLEG SD NWIS T D+KST+GY+FTLGG AVSWKS KQ CI RSTMESEFIALDKAGEEAE
Subjt: LSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGEEAE
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 8.5e-33 | 25.62 | Show/hide |
Query: KNGFKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQQ-GLDYFDTHSPVTRITSIRMLITILALHGFEIHQMD
K+ ++ A+N E+ + N+TW + P + +W+F K G+ +YKA+LVA+G+ Q+ +DY +T +PV RI+S R +++++ + ++HQMD
Subjt: KNGFKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQQ-GLDYFDTHSPVTRITSIRMLITILALHGFEIHQMD
Query: VKTTFLNDELDEEIYMQQPEG-------------------------------------------------------------------------------
VKT FLN L EEIYM+ P+G
Subjt: VKTTFLNDELDEEIYMQQPEG-------------------------------------------------------------------------------
Query: ----------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYV
+ LSQS YV KIL K+ TP+ ++ N +IG LMYIM CTRP +
Subjt: ----------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQLEYSRIIGSLMYIMSCTRPHIAYV
Query: VSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTR---YPAVLEGNSDDNWISSTKDSKSTNGYIFTL-GGGAVSWKSFKQICIVRSTMESEFIALD
V+ LS Y S + W+ + R+ YLK T + +L + + + + G D +W S D KST GY+F + + W + +Q + S+ E+E++AL
Subjt: VSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTR---YPAVLEGNSDDNWISSTKDSKSTNGYIFTL-GGGAVSWKSFKQICIVRSTMESEFIALD
Query: KAGEEA
+A EA
Subjt: KAGEEA
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| P0CV72 Secreted RxLR effector protein 161 | 1.5e-21 | 42.4 | Show/hide |
Query: YSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRY-PAVLEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKS
Y +G++MY+M TRP +A V LS + S+P HW+A+ R+ YL+ T+ Y L +TR A L G SD +W + +ST+GY+F L GG VSW+S
Subjt: YSRIIGSLMYIMSCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRY-PAVLEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKS
Query: FKQICIVRSTMESEFIALDKAGEEA
KQ + S+ E E++AL +A +EA
Subjt: FKQICIVRSTMESEFIALDKAGEEA
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.7e-50 | 30.41 | Show/hide |
Query: KNGFKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMD
KN A+ E+ES+ N T++LV+LP G +PL CKW+FK K D + +YKA+LV KG++Q +G+D+ + SPV ++TSIR ++++ A E+ Q+D
Subjt: KNGFKLAVNNEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKLKTDGSIDKYKAKLVAKGYKQ-QGLDYFDTHSPVTRITSIRMLITILALHGFEIHQMD
Query: VKTTFLNDELDEEIYMQQPEG-------------------------------------------------------------------------------
VKT FL+ +L+EEIYM+QPEG
Subjt: VKTTFLNDELDEEIYMQQPEG-------------------------------------------------------------------------------
Query: -------------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSK-------NNGSSIAQLEYSRIIGSLMYIM
T + L LSQ Y++++L+++ TP+ G L LSK ++A++ YS +GSLMY M
Subjt: -------------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSK-------NNGSSIAQLEYSRIIGSLMYIM
Query: SCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMES
CTRP IA+ V +S + NPG +HW+A+ I YL+ T L + +L+G +D + + KS+ GY+FT GGA+SW+S Q C+ ST E+
Subjt: SCTRPHIAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAVLEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMES
Query: EFIALDKAGEE
E+IA + G+E
Subjt: EFIALDKAGEE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.2e-36 | 28.43 | Show/hide |
Query: LSKNGFKLAVNNEIESIMHNHTWELVDLPLGSKPL-GCKWIFKRKLKTDGSIDKYKAKLVAKGYKQQ-GLDYFDTHSPVTRITSIRMLITILALHGFEIH
L ++ A+ +EI + + NHTW+LV P + GC+WIF +K +DGS+++YKA+LVAKGY Q+ GLDY +T SPV + TSIR+++ + + I
Subjt: LSKNGFKLAVNNEIESIMHNHTWELVDLPLGSKPL-GCKWIFKRKLKTDGSIDKYKAKLVAKGYKQQ-GLDYFDTHSPVTRITSIRMLITILALHGFEIH
Query: QMDVKTTFLNDELDEEIYMQQPEG----------------------------------------------------------------------------
Q+DV FL L +++YM QP G
Subjt: QMDVKTTFLNDELDEEIYMQQPEG----------------------------------------------------------------------------
Query: -------------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQ-LEYSRIIGSLMYIMSCTRPH
P GL LSQ Y+ +L + TP+ S LS +G+ + EY I+GSL Y ++ TRP
Subjt: -------------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQ-LEYSRIIGSLMYIMSCTRPH
Query: IAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAV-LEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIAL
I+Y V++LS + P +H +A+ RI YL T N+ + + + L SD +W D STNGYI LG +SW S KQ +VRS+ E+E+ ++
Subjt: IAYVVSKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAV-LEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIAL
Query: DKAGEEAE
E +
Subjt: DKAGEEAE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.1e-39 | 29.28 | Show/hide |
Query: FKLAVNNEIESIMHNHTWELVDLPLGSKPL-GCKWIFKRKLKTDGSIDKYKAKLVAKGYKQQ-GLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVK
++ A+ +EI + + NHTW+LV P S + GC+WIF +K +DGS+++YKA+LVAKGY Q+ GLDY +T SPV + TSIR+++ + + I Q+DV
Subjt: FKLAVNNEIESIMHNHTWELVDLPLGSKPL-GCKWIFKRKLKTDGSIDKYKAKLVAKGYKQQ-GLDYFDTHSPVTRITSIRMLITILALHGFEIHQMDVK
Query: TTFLNDELDEEIYMQQPEG---------------------------------------------------------------------------------
FL L +E+YM QP G
Subjt: TTFLNDELDEEIYMQQPEG---------------------------------------------------------------------------------
Query: --------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQ-LEYSRIIGSLMYIMSCTRPHIAYVV
PQGL LSQ Y +L + TP+ S L+ ++G+ + EY I+GSL Y ++ TRP ++Y V
Subjt: --------------------------TPQGLVLSQSHYVDKILKKYTKHGNVIAKTPIDGSLHLSKNNGSSIAQ-LEYSRIIGSLMYIMSCTRPHIAYVV
Query: SKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAV-LEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGE
++LS Y P DHW A+ R+ YL T ++ + + + L SD +W T D STNGYI LG +SW S KQ +VRS+ E+E+ ++
Subjt: SKLSCYRSNPGHDHWKAILRISEYLKYTKNYELHYTRYPAV-LEGNSDDNWISSTKDSKSTNGYIFTLGGGAVSWKSFKQICIVRSTMESEFIALDKAGE
Query: EAE
E +
Subjt: EAE
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