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CSPI05G12510 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G12510
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionC2H2-type domain-containing protein
Genome locationChr5:11779755..11780180
RNA-Seq ExpressionCSPI05G12510
SyntenyCSPI05G12510
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648113.1 hypothetical protein Csa_004735 [Cucumis sativus]1.9e-6398.47Show/hide
Query:  MNLEKQKSDGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK
        MNLEKQKS GSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSS GPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK
Subjt:  MNLEKQKSDGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK

Query:  QSDEKAGGQSSQHDNVDNELDLELRLGSNPK
        QSDEKAGGQSSQHDNVDNELDLELRLGSNPK
Subjt:  QSDEKAGGQSSQHDNVDNELDLELRLGSNPK

TYK14444.1 transcriptional regulator TAC1-like [Cucumis melo var. makuwa]1.5e-3665.33Show/hide
Query:  MNLEKQKSDGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGK-------KVQELQLFS
        MN  KQ S GS S SW +EC+ICK+SFKSAKALGGHM +H+  EID KLK QS+S  I TDLRWVVPSA AEG  RDRNRGKG        KV+EL LF 
Subjt:  MNLEKQKSDGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGK-------KVQELQLFS

Query:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
        +KPS LKK   ++   GQSSQ DNV +E+DLELRLGSN KKST T FKFF
Subjt:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF

XP_004140464.1 probable transcriptional regulator RABBIT EARS [Cucumis sativus]8.0e-7098.58Show/hide
Query:  MNLEKQKSDGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK
        MNLEKQKS GSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSS GPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK
Subjt:  MNLEKQKSDGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK

Query:  QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
        QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
Subjt:  QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF

XP_008465230.1 PREDICTED: uncharacterized protein LOC103502886 [Cucumis melo]2.6e-3665.33Show/hide
Query:  MNLEKQKSDGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGK-------KVQELQLFS
        MN  KQ S GS S SW +EC+ICK+SFKSAKALGGHM +H+  EID KLK QS+S  I TDLRWVV SA AEG  RDRNRGKG        KV+EL LF 
Subjt:  MNLEKQKSDGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGK-------KVQELQLFS

Query:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
        +KPS LKK   ++   GQSSQ DNV +E+DLELRLGSNPKKST T FKFF
Subjt:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF

XP_022141797.1 transcriptional regulator TAC1-like [Momordica charantia]5.5e-1037.8Show/hide
Query:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGP-----------------ISTDLR--WVVPSAIAEGSSRDRNRG--------------KGKK
        +EC+ CK+ F +A+ALGGHM +H   +  AK+KQS+S                   IST  R  WV+PS   EG  R  +RG              KG K
Subjt:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGP-----------------ISTDLR--WVVPSAIAEGSSRDRNRG--------------KGKK

Query:  VQELQLFSQKPSKLKKK-----------QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPT
        VQ+LQLF +K S + +K            SD+K      QH +  +ELDLELRLG  P+ STP+
Subjt:  VQELQLFSQKPSKLKKK-----------QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPT

TrEMBL top hitse value%identityAlignment
A0A0A0KR10 C2H2-type domain-containing protein3.9e-7098.58Show/hide
Query:  MNLEKQKSDGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK
        MNLEKQKS GSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSS GPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK
Subjt:  MNLEKQKSDGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK

Query:  QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
        QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
Subjt:  QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF

A0A1S3CNE2 uncharacterized protein LOC1035028861.3e-3665.33Show/hide
Query:  MNLEKQKSDGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGK-------KVQELQLFS
        MN  KQ S GS S SW +EC+ICK+SFKSAKALGGHM +H+  EID KLK QS+S  I TDLRWVV SA AEG  RDRNRGKG        KV+EL LF 
Subjt:  MNLEKQKSDGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGK-------KVQELQLFS

Query:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
        +KPS LKK   ++   GQSSQ DNV +E+DLELRLGSNPKKST T FKFF
Subjt:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF

A0A5A7VBW4 Transcriptional regulator TAC1-like1.3e-3665.33Show/hide
Query:  MNLEKQKSDGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGK-------KVQELQLFS
        MN  KQ S GS S SW +EC+ICK+SFKSAKALGGHM +H+  EID KLK QS+S  I TDLRWVV SA AEG  RDRNRGKG        KV+EL LF 
Subjt:  MNLEKQKSDGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGK-------KVQELQLFS

Query:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
        +KPS LKK   ++   GQSSQ DNV +E+DLELRLGSNPKKST T FKFF
Subjt:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF

A0A5D3CTX8 Transcriptional regulator TAC1-like7.4e-3765.33Show/hide
Query:  MNLEKQKSDGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGK-------KVQELQLFS
        MN  KQ S GS S SW +EC+ICK+SFKSAKALGGHM +H+  EID KLK QS+S  I TDLRWVVPSA AEG  RDRNRGKG        KV+EL LF 
Subjt:  MNLEKQKSDGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGK-------KVQELQLFS

Query:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
        +KPS LKK   ++   GQSSQ DNV +E+DLELRLGSN KKST T FKFF
Subjt:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF

A0A6J1CKV7 transcriptional regulator TAC1-like2.6e-1037.8Show/hide
Query:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGP-----------------ISTDLR--WVVPSAIAEGSSRDRNRG--------------KGKK
        +EC+ CK+ F +A+ALGGHM +H   +  AK+KQS+S                   IST  R  WV+PS   EG  R  +RG              KG K
Subjt:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGP-----------------ISTDLR--WVVPSAIAEGSSRDRNRG--------------KGKK

Query:  VQELQLFSQKPSKLKKK-----------QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPT
        VQ+LQLF +K S + +K            SD+K      QH +  +ELDLELRLG  P+ STP+
Subjt:  VQELQLFSQKPSKLKKK-----------QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPT

SwissProt top hitse value%identityAlignment
Q9LHS9 Probable transcriptional regulator RABBIT EARS3.6e-0434.4Show/hide
Query:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKKQSDE------KAGGQS
        + CS C + FKSA+ALGGHM VH      A+LKQ S  P STD      +   E   + +    G KV  +Q  ++KP+  K++ SD       ++  + 
Subjt:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKKQSDE------KAGGQS

Query:  SQHDNVDNELDLELRLGS---NPKK
         +HDN + + DL + L S   +P+K
Subjt:  SQHDNVDNELDLELRLGS---NPKK

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 104.8e-0454.29Show/hide
Query:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQS
        + CS C++ FKSA+ALGGHM VH      A+LKQ+
Subjt:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQS

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein7.4e-0551.35Show/hide
Query:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSS
        + CS CK+ F+SA+ALGGHM VH       +L+QS S
Subjt:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSS

AT5G03510.1 C2H2-type zinc finger family protein3.3e-0544.07Show/hide
Query:  MNLEKQKSDGSHS-TSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPIST
        ++L+   SDGS      HECSICK  F S +ALGGHMR H    I+A    +    IS+
Subjt:  MNLEKQKSDGSHS-TSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPIST

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein2.5e-0534.4Show/hide
Query:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKKQSDE------KAGGQS
        + CS C + FKSA+ALGGHM VH      A+LKQ S  P STD      +   E   + +    G KV  +Q  ++KP+  K++ SD       ++  + 
Subjt:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKKQSDE------KAGGQS

Query:  SQHDNVDNELDLELRLGS---NPKK
         +HDN + + DL + L S   +P+K
Subjt:  SQHDNVDNELDLELRLGS---NPKK

AT5G61470.1 C2H2-like zinc finger protein2.8e-0448.84Show/hide
Query:  CSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPISTDLR
        C +CKKSF + KALGGHMR H           SS+G I+  LR
Subjt:  CSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPISTDLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTAGAGAAACAAAAAAGTGATGGGAGTCATTCAACATCTTGGCATGAGTGTAGTATTTGCAAGAAGAGCTTCAAAAGTGCAAAAGCTTTAGGAGGACATATGCG
AGTGCATAACACTGGGGAGATAGACGCTAAGTTAAAGCAATCATCATCGGGACCAATCTCCACAGATTTGAGATGGGTAGTCCCGTCAGCTATTGCAGAAGGTAGTAGTC
GAGATCGAAACCGAGGCAAGGGTAAGAAGGTACAAGAACTTCAACTTTTCAGCCAAAAACCCTCCAAGTTGAAGAAAAAGCAGTCCGATGAGAAGGCAGGAGGACAATCA
TCTCAACATGATAATGTTGACAATGAGTTGGATCTTGAACTTAGATTAGGATCTAACCCAAAGAAGTCAACTCCAACTATATTTAAGTTCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTAGAGAAACAAAAAAGTGATGGGAGTCATTCAACATCTTGGCATGAGTGTAGTATTTGCAAGAAGAGCTTCAAAAGTGCAAAAGCTTTAGGAGGACATATGCG
AGTGCATAACACTGGGGAGATAGACGCTAAGTTAAAGCAATCATCATCGGGACCAATCTCCACAGATTTGAGATGGGTAGTCCCGTCAGCTATTGCAGAAGGTAGTAGTC
GAGATCGAAACCGAGGCAAGGGTAAGAAGGTACAAGAACTTCAACTTTTCAGCCAAAAACCCTCCAAGTTGAAGAAAAAGCAGTCCGATGAGAAGGCAGGAGGACAATCA
TCTCAACATGATAATGTTGACAATGAGTTGGATCTTGAACTTAGATTAGGATCTAACCCAAAGAAGTCAACTCCAACTATATTTAAGTTCTTCTGA
Protein sequenceShow/hide protein sequence
MNLEKQKSDGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSSGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKKQSDEKAGGQS
SQHDNVDNELDLELRLGSNPKKSTPTIFKFF