; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G12590 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G12590
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING/U-box superfamily protein
Genome locationChr5:11884902..11886086
RNA-Seq ExpressionCSPI05G12590
SyntenyCSPI05G12590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032189.1 RING/U-box superfamily protein isoform 1 [Cucumis melo var. makuwa]1.1e-4697.89Show/hide
Query:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS
        ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNS PPQPLQH+CS
Subjt:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS

TYK14433.1 RING/U-box superfamily protein isoform 1 [Cucumis melo var. makuwa]1.1e-4697.89Show/hide
Query:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS
        ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNS PPQPLQH+CS
Subjt:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS

XP_004140426.1 uncharacterized protein LOC101206682 isoform X1 [Cucumis sativus]2.1e-48100Show/hide
Query:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS
        ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS
Subjt:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS

XP_008456843.1 PREDICTED: uncharacterized protein LOC103496673 isoform X2 [Cucumis melo]1.1e-4697.89Show/hide
Query:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS
        ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNS PPQPLQH+CS
Subjt:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS

XP_031741483.1 uncharacterized protein LOC101206682 isoform X3 [Cucumis sativus]2.1e-48100Show/hide
Query:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS
        ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS
Subjt:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS

TrEMBL top hitse value%identityAlignment
A0A1S3C3S2 uncharacterized protein LOC103496673 isoform X15.5e-4797.89Show/hide
Query:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS
        ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNS PPQPLQH+CS
Subjt:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS

A0A1S3C495 uncharacterized protein LOC103496673 isoform X25.5e-4797.89Show/hide
Query:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS
        ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNS PPQPLQH+CS
Subjt:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS

A0A5A7SSH6 RING/U-box superfamily protein isoform 15.5e-4797.89Show/hide
Query:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS
        ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNS PPQPLQH+CS
Subjt:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS

A0A5D3CRE0 RING/U-box superfamily protein isoform 15.5e-4797.89Show/hide
Query:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS
        ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNS PPQPLQH+CS
Subjt:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS

A0A6J1JTN9 uncharacterized protein LOC1114874101.5e-4493.68Show/hide
Query:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS
        ENGD+AIDDGIHRGVQYPFA NEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPAN++SCP QPLQHS S
Subjt:  ENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS

SwissProt top hitse value%identityAlignment
Q58FY4 U-box domain-containing protein 637.0e-1551.61Show/hide
Query:  RGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKI
        RG+Q+PF+  + ++I+GN+RTP +FVG+ AVI +QCLNGWY++K +   E+++LQ+ SL KI
Subjt:  RGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKI

Q6DBN5 U-box domain-containing protein 622.9e-1661.4Show/hide
Query:  YPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRK
        +PFA  ++V+IKGN+RTP +FVG+EAV+T+QCLNGWY++K +   E+V+LQYRSL K
Subjt:  YPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRK

Arabidopsis top hitse value%identityAlignment
AT2G40640.1 RING/U-box superfamily protein5.0e-1651.61Show/hide
Query:  RGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKI
        RG+Q+PF+  + ++I+GN+RTP +FVG+ AVI +QCLNGWY++K +   E+++LQ+ SL KI
Subjt:  RGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKI

AT2G40640.2 RING/U-box superfamily protein4.1e-1055.81Show/hide
Query:  RGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLL
        RG+Q+PF+  + ++I+GN+RTP +FVG+ AVI +QCLNGW  L
Subjt:  RGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLL

AT3G19895.1 RING/U-box superfamily protein2.2e-3279.22Show/hide
Query:  MENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILN
        +ENGD A DDG+HR V YPFA NEKVLIKGNRRTPEKFVGKEA++TSQCLNGWYLLKI+ +G+NVRLQYRSL+K++N
Subjt:  MENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILN

AT5G05230.1 RING/U-box superfamily protein2.0e-1761.4Show/hide
Query:  YPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRK
        +PFA  ++V+IKGN+RTP +FVG+EAV+T+QCLNGWY++K +   E+V+LQYRSL K
Subjt:  YPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACAATGGAAAATGGTGATCTTGCCATCGATGATGGCATCCATCGAGGAGTGCAGTATCCTTTTGCAGAAAATGAAAAGGTTCTAATTAAGGGAAACAGGAGAAC
ACCAGAAAAATTTGTTGGAAAAGAAGCAGTCATTACATCCCAGTGTCTCAATGGCTGGTATTTGCTAAAAATCATTGGTACTGGAGAGAATGTTCGGTTGCAATATCGAT
CTCTTAGGAAGATCCTTAACACGACACCAGCTAATGACAATAGCTGTCCTCCACAGCCACTTCAGCACAGTTGCTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAACAATGGAAAATGGTGATCTTGCCATCGATGATGGCATCCATCGAGGAGTGCAGTATCCTTTTGCAGAAAATGAAAAGGTTCTAATTAAGGGAAACAGGAGAAC
ACCAGAAAAATTTGTTGGAAAAGAAGCAGTCATTACATCCCAGTGTCTCAATGGCTGGTATTTGCTAAAAATCATTGGTACTGGAGAGAATGTTCGGTTGCAATATCGAT
CTCTTAGGAAGATCCTTAACACGACACCAGCTAATGACAATAGCTGTCCTCCACAGCCACTTCAGCACAGTTGCTCATAG
Protein sequenceShow/hide protein sequence
MKTMENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS