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CSPI05G12750 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G12750
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr5:12050039..12050617
RNA-Seq ExpressionCSPI05G12750
SyntenyCSPI05G12750
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011658449.1 uncharacterized protein LOC105436008 [Cucumis sativus]1.6e-7379.69Show/hide
Query:  MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSER
        M S+SQQTKENG M I YPML PHNYT+ TIK EAILD Q VW+AIE  RG EVDVKK KKA  YILQCI +DVLL+IAKKK+A+EIWD+ KTRYLGSER
Subjt:  MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSER

Query:  VKMARVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE
        VKMARV  LKSE NVLRMKETETIDEF GKIS L SKFTTL VALEDSSLVKKLLDSVPDKYL IV  I+QFQDLETMPFEE IGRM  YEE
Subjt:  VKMARVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE

XP_031737549.1 uncharacterized protein LOC116402439 [Cucumis sativus]5.0e-8388.54Show/hide
Query:  MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSER
        M SISQQTKENGGMSILY MLTPHNYTV TIKAEAILD QGV +AIE ARGAEVDVKK KKAR+YILQCIP+DVLL+IAKKKTA+EIWDS KTRYLGSER
Subjt:  MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSER

Query:  VKMARVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE
        VKMARVQTLKSE +VLRMKETETIDEF GKISGL SKFTTL VALEDSSLVKKLLDSVPDKYL IV  I+QFQDLETMPFEEAIGRMKAYEE
Subjt:  VKMARVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE

XP_031741713.1 uncharacterized protein LOC116403908 [Cucumis sativus]7.5e-7989.39Show/hide
Query:  MSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQTLKSEL
        MSILYPMLTPHNYTV TIKAEAIL+ QGVW+AIE ARGAEVDVKK KKARAYILQCIP+DVLL+IAKKKTA+EIWDS KTRYLGSERVKMARVQTLKSE 
Subjt:  MSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQTLKSEL

Query:  NVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE
        NVLRMKE ETIDEF+GKISGL SKFTTL VALEDSSLV KLLDSVPDKYL IV  IKQFQDLETMPFEEAIGRMKAYEE
Subjt:  NVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE

XP_031745073.1 uncharacterized protein LOC116405251 [Cucumis sativus]1.0e-8388.54Show/hide
Query:  MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSER
        MTS SQQTKENGGM ILYPMLTPHNYTV TIKAEAILD QGVW+AIE ARGAEVDVKK KKA AYILQCIP+DVLL+IAKKKTA+EIWDS KTRYLGSER
Subjt:  MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSER

Query:  VKMARVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE
        VKMARVQTLK E NVLRMKETE IDEF GKISGL SKFTTL VAL+DSSLVKKLLDSVPDKYL IVA I+QFQDLETMPFEEAIGRMKAYEE
Subjt:  VKMARVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE

XP_042450925.1 uncharacterized protein LOC122035851 [Zingiber officinale]1.3e-7074.09Show/hide
Query:  MTSISQ-QTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSE
        M+ I Q   KENGG+S  YPML PHNYTV  IK EAILD QGVW+ +E A GA+VD KK KKARAYILQC+P+D+LL+IA KKTA+E+WDS KTRYLGS+
Subjt:  MTSISQ-QTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSE

Query:  RVKMARVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE
        RVK ARVQTLKSE + LRMKETETIDEF GK+S L SKF+TL   LEDSSLVKKLLDSVPDK+  IVA I+QF DLETMPFEEAIGR+KAYEE
Subjt:  RVKMARVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE

TrEMBL top hitse value%identityAlignment
A0A5N6MA89 Uncharacterized protein1.8e-5459.24Show/hide
Query:  KENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQT
        KE G +S+  P LT  NYT  +IK EAI+D QG+W++IE  +G  VD KK K ARA++ Q IP+DVLL++AKKKTA+E+W+S K RYLG++RV+ AR+ T
Subjt:  KENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQT

Query:  LKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE
        LKSE + LRM+ETE+IDE+ GK+S ++SK ++L   LEDS +V+KLLD+VPDKYL +VA I+Q  DL+TMPFEEA+GR+KAYE+
Subjt:  LKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE

A0A5N6NYJ8 CCHC-type domain-containing protein2.6e-5354.69Show/hide
Query:  MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSER
        + + S   K+   +S+  P LT  NYT   IK EA++D QG+W++IE   GA VD KK K +RA+I Q IP+DVLL++AKKKTA+EIWDS K RY+G++R
Subjt:  MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSER

Query:  VKMARVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE
        V+ AR+ TLK+E  +L+MKE E++DEF GK++G+V+K+ +L   ++D  LV+KLLDSVPDKYL +VA I+Q+ D++TMPF+EAIGR+KAYE+
Subjt:  VKMARVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE

A0A5N6P849 Uncharacterized protein2.0e-5357.29Show/hide
Query:  MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSER
        M   +   KE+  MS+  P+LT  NYT   IK EAILD QG+WDAIE   G   D KK K ARA++ Q IP+DVLL+++KKKTAQE+W+S K RYLG+ER
Subjt:  MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSER

Query:  VKMARVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE
        V+ AR+ TL+SE   LRMK+ ETIDE+ GK+SG++SK ++L   L DS LV+KL D+VPDK++ +VA I+Q+ DL++MPFEEAIGR+KAYE+
Subjt:  VKMARVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE

Q0JH75 Os01g0879800 protein5.8e-5357.98Show/hide
Query:  SQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMA
        + ++   G +S+ YP+LT  NY+   IK EA ++ QG+WDAIE A    VD+KK K+ARA +   +P+DVL +IAKKKTA+E+W+S KTR+LG ERVK A
Subjt:  SQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMA

Query:  RVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE
        RVQTLKS+   L MK+TE+IDEF GKISGL +K + L V ++D   VKKLLDSVPDK+L ++A I+QF DL++MPF+EAIGR+KAYEE
Subjt:  RVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE

Q2QUP7 Laccase5.8e-5357.98Show/hide
Query:  SQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMA
        + ++   G +S+ YP+LT  NY+   IK EA ++ QG+WDAIE A    VD+KK K+ARA +   +P+DVL +IAKKKTA+E+W+S KTR+LG ERVK A
Subjt:  SQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMA

Query:  RVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE
        RVQTLKS+   L MK+TE+IDEF GKISGL +K + L V ++D   VKKLLDSVPDK+L ++A I+QF DL++MPF+EAIGR+KAYEE
Subjt:  RVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGCATCTCGCAGCAAACAAAGGAGAATGGTGGAATGTCGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGCGGACGATAAAGGCAGAAGCAATCCT
CGATGTCCAAGGAGTTTGGGATGCAATAGAGCTAGCGAGAGGAGCCGAAGTGGATGTGAAGAAATACAAGAAGGCACGTGCATACATTCTCCAATGCATCCCGAAAGACG
TGCTTCTAAAAATCGCAAAGAAGAAGACCGCACAGGAAATATGGGATAGTCACAAGACAAGGTATTTGGGTAGTGAGCGGGTGAAGATGGCAAGAGTTCAAACCTTGAAG
AGTGAGCTTAATGTTCTTCGGATGAAGGAAACCGAGACAATCGATGAGTTCATAGGAAAGATCAGCGGATTAGTAAGCAAGTTCACCACCCTCGAAGTCGCACTTGAGGA
TTCATCATTGGTCAAGAAGCTCCTCGATTCCGTCCCCGACAAATATCTTTCCATTGTCGCCGAAATCAAGCAATTCCAAGATCTTGAAACCATGCCGTTTGAAGAAGCAA
TTGGACGGATGAAGGCGTACGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGCATCTCGCAGCAAACAAAGGAGAATGGTGGAATGTCGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGCGGACGATAAAGGCAGAAGCAATCCT
CGATGTCCAAGGAGTTTGGGATGCAATAGAGCTAGCGAGAGGAGCCGAAGTGGATGTGAAGAAATACAAGAAGGCACGTGCATACATTCTCCAATGCATCCCGAAAGACG
TGCTTCTAAAAATCGCAAAGAAGAAGACCGCACAGGAAATATGGGATAGTCACAAGACAAGGTATTTGGGTAGTGAGCGGGTGAAGATGGCAAGAGTTCAAACCTTGAAG
AGTGAGCTTAATGTTCTTCGGATGAAGGAAACCGAGACAATCGATGAGTTCATAGGAAAGATCAGCGGATTAGTAAGCAAGTTCACCACCCTCGAAGTCGCACTTGAGGA
TTCATCATTGGTCAAGAAGCTCCTCGATTCCGTCCCCGACAAATATCTTTCCATTGTCGCCGAAATCAAGCAATTCCAAGATCTTGAAACCATGCCGTTTGAAGAAGCAA
TTGGACGGATGAAGGCGTACGAGGAATGA
Protein sequenceShow/hide protein sequence
MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQTLK
SELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE