; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G12930 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G12930
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr5:12332084..12333215
RNA-Seq ExpressionCSPI05G12930
SyntenyCSPI05G12930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011658449.1 uncharacterized protein LOC105436008 [Cucumis sativus]2.5e-5582.76Show/hide
Query:  EVDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLVK
        EVDVKKDKKAC YILQCI +DVLLQI KKK+AKEIWD+LKTRYLGSERVKMARV  LKSEFNVLRMKE ETI+EFAGKIS LA+KFTTL VALEDSSLVK
Subjt:  EVDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLVK

Query:  KLLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKRTARL
        KLLDS+ DKYL IV+ IEQFQDLE MPFEE IGRM  YE+RT +L
Subjt:  KLLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKRTARL

XP_031737549.1 uncharacterized protein LOC116402439 [Cucumis sativus]5.3e-6189.04Show/hide
Query:  AEVDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLV
        AEVDVKKDKKA +YILQCIP+DVLLQI KKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEF+VLRMKE ETI+EFAGKISGLA+KFTTL VALEDSSLV
Subjt:  AEVDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLV

Query:  KKLLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKRTARL
        KKLLDS+ DKYLPIV  IEQFQDLE MPFEEAIGRMKAYE+RT RL
Subjt:  KKLLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKRTARL

XP_031741713.1 uncharacterized protein LOC116403908 [Cucumis sativus]2.4e-6189.66Show/hide
Query:  AEVDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLV
        AEVDVKKDKKA AYILQCIP+DVLLQI KKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETI+EF GKISGLA+KFTTLRVALEDSSLV
Subjt:  AEVDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLV

Query:  KKLLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKRTAR
         KLLDS+ DKYLPIV  I+QFQDLE MPFEEAIGRMKAYE+RT R
Subjt:  KKLLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKRTAR

XP_031745073.1 uncharacterized protein LOC116405251 [Cucumis sativus]6.2e-6289.04Show/hide
Query:  AEVDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLV
        AEVDVKKDKKACAYILQCIP+DVLLQI KKKTAKEIWDSLKTRYLGSERVKMARVQTLK EFNVLRMKE E I+EFAGKISGLA+KFTTL VAL+DSSLV
Subjt:  AEVDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLV

Query:  KKLLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKRTARL
        KKLLDS+ DKYLPIV+ IEQFQDLE MPFEEAIGRMKAYE+RT RL
Subjt:  KKLLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKRTARL

XP_042450925.1 uncharacterized protein LOC122035851 [Zingiber officinale]4.8e-5476.35Show/hide
Query:  ERAEVDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSS
        E A+VD KKDKKA AYILQC+P+D+LLQI  KKTAKE+WDSLKTRYLGS+RVK ARVQTLKSEF+ LRMKE ETI+EFAGK+S L++KF+TL   LEDSS
Subjt:  ERAEVDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSS

Query:  LVKKLLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKRTARL
        LVKKLLDS+ DK+ PIV+ IEQF DLE MPFEEAIGR+KAYE+RT RL
Subjt:  LVKKLLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKRTARL

TrEMBL top hitse value%identityAlignment
A0A5A7SWG6 Uncharacterized protein1.4e-4380.33Show/hide
Query:  ERAEVDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSS
        + A+V+ KKDK A AYILQCIPKDVLLQI KKKTAKEIWDSLK +YLGSERVKMARVQTLK EF+VL+MKE ETI+EFAGKISGLA+KF+TL VALEDSS
Subjt:  ERAEVDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSS

Query:  LVKKLLDSILDKYLPIVSEIEQ
        LVKKLLDS+ +KYLPI++ IEQ
Subjt:  LVKKLLDSILDKYLPIVSEIEQ

A0A5N6MA89 Uncharacterized protein2.1e-3960.71Show/hide
Query:  VDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLVKK
        VD KK K A A++ Q IP+DVLLQ+ KKKTAKE+W+SLK RYLG++RV+ AR+ TLKSEF+ LRM+E E+I+E+AGK+S + +K ++L   LEDS +V+K
Subjt:  VDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLVKK

Query:  LLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKR
        LLD++ DKYL +V+ IEQ  DL+ MPFEEA+GR+KAYE R
Subjt:  LLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKR

A0A5N6NYJ8 CCHC-type domain-containing protein3.2e-4059.15Show/hide
Query:  AEVDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLV
        A VD KK+K + A+I Q IP+DVLLQ+ KKKTAKEIWDSLK RY+G++RV+ AR+ TLK+EF +L+MKE E+++EFAGK++G+  K+ +L   ++D  LV
Subjt:  AEVDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLV

Query:  KKLLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKR
        +KLLDS+ DKYL +V+ IEQ+ D++ MPF+EAIGR+KAYE R
Subjt:  KKLLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKR

Q0JH75 Os01g0879800 protein2.6e-4265Show/hide
Query:  VDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLVKK
        VD+KKDK+A A +   +P+DVL QI KKKTAKE+W+SLKTR+LG ERVK ARVQTLKS+F  L MK+ E+I+EFAGKISGLANK + L V ++D   VKK
Subjt:  VDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLVKK

Query:  LLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKR
        LLDS+ DK+L +++ IEQF DL+ MPF+EAIGR+KAYE+R
Subjt:  LLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKR

Q2QUP7 Laccase2.6e-4265Show/hide
Query:  VDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLVKK
        VD+KKDK+A A +   +P+DVL QI KKKTAKE+W+SLKTR+LG ERVK ARVQTLKS+F  L MK+ E+I+EFAGKISGLANK + L V ++D   VKK
Subjt:  VDVKKDKKACAYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLVKK

Query:  LLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKR
        LLDS+ DK+L +++ IEQF DL+ MPF+EAIGR+KAYE+R
Subjt:  LLDSILDKYLPIVSEIEQFQDLEIMPFEEAIGRMKAYEKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTTGAAGGAGCCCAAAATGAGACACGCAAAGTGATAAGTAGCAGCGGTAGCAGAAGGCAGACTTTGCGCATGAAAGCTAAGCAAAATGCACAAAGTAATGGTAG
CCCAAATTTGGAGAACTGTGAGACAAAGTCGCTTTATTCTCTCTTCCCGCTTTATGCTCTCTTCTCGCTTTATTCTCTCTGTTGTCTTCTCATTGCATATTCCAACAAAG
ATGGCAAGCGTCTCGCAATAAACAAAGAAGAATGGCGGAATACCGATTCTCTACCCAAAAGCCAGCGAGAGAGAGCCGAAGTGGATGTGAAGAAAGACAAGAAGGCGTGT
GCATACATTCTCCAATGCATCCCGAAAGACGTGCTTCTACAAATCACAAAGAAGAAGACCGCAAAGGAAATATGGGATAGTCTCAAGACAAGGTACTTGGGCAGTGAGCG
GGTGAAGATGGCGAGAGTTCAAACCTTGAAGAGTGAGTTTAATGTTCTTCGGATGAAGGAAATCGAGACGATCAATGAGTTCGCAGGAAAAATCAGCGGATTAGCAAACA
AGTTCACCACCCTCAGAGTGGCACTTGAGGATTCATCATTGGTCAAGAAGCTTCTCGATTCCATCCTCGACAAATATCTTCCAATTGTCTCTGAAATCGAGCAATTCCAA
GATCTCGAAATCATGCCATTTGAAGAAGCAATTGGCCGAATGAAGGCGTACGAGAAACGGACAGCACGACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTTGAAGGAGCCCAAAATGAGACACGCAAAGTGATAAGTAGCAGCGGTAGCAGAAGGCAGACTTTGCGCATGAAAGCTAAGCAAAATGCACAAAGTAATGGTAG
CCCAAATTTGGAGAACTGTGAGACAAAGTCGCTTTATTCTCTCTTCCCGCTTTATGCTCTCTTCTCGCTTTATTCTCTCTGTTGTCTTCTCATTGCATATTCCAACAAAG
ATGGCAAGCGTCTCGCAATAAACAAAGAAGAATGGCGGAATACCGATTCTCTACCCAAAAGCCAGCGAGAGAGAGCCGAAGTGGATGTGAAGAAAGACAAGAAGGCGTGT
GCATACATTCTCCAATGCATCCCGAAAGACGTGCTTCTACAAATCACAAAGAAGAAGACCGCAAAGGAAATATGGGATAGTCTCAAGACAAGGTACTTGGGCAGTGAGCG
GGTGAAGATGGCGAGAGTTCAAACCTTGAAGAGTGAGTTTAATGTTCTTCGGATGAAGGAAATCGAGACGATCAATGAGTTCGCAGGAAAAATCAGCGGATTAGCAAACA
AGTTCACCACCCTCAGAGTGGCACTTGAGGATTCATCATTGGTCAAGAAGCTTCTCGATTCCATCCTCGACAAATATCTTCCAATTGTCTCTGAAATCGAGCAATTCCAA
GATCTCGAAATCATGCCATTTGAAGAAGCAATTGGCCGAATGAAGGCGTACGAGAAACGGACAGCACGACTCTGA
Protein sequenceShow/hide protein sequence
MGFEGAQNETRKVISSSGSRRQTLRMKAKQNAQSNGSPNLENCETKSLYSLFPLYALFSLYSLCCLLIAYSNKDGKRLAINKEEWRNTDSLPKSQRERAEVDVKKDKKAC
AYILQCIPKDVLLQITKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETINEFAGKISGLANKFTTLRVALEDSSLVKKLLDSILDKYLPIVSEIEQFQ
DLEIMPFEEAIGRMKAYEKRTARL